RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
TOP1MT-217ENST00000523417 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
TOP1MT-217ENST00000523417 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
TOP1MT-217ENST00000523417 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
TOP1MT-217ENST00000523417 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
TOP1MT-217ENST00000523417 WASHC2AQ641Q2 1341 aa17.54■□□□□ 0.4
TOP1MT-217ENST00000523417 MEGF6O75095 1541 aa17.54■□□□□ 0.4
TOP1MT-217ENST00000523417 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
TOP1MT-217ENST00000523417 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
TOP1MT-217ENST00000523417 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
TOP1MT-217ENST00000523417 NSD2O96028 1365 aa17.53■□□□□ 0.4
TOP1MT-217ENST00000523417 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
TOP1MT-217ENST00000523417 PAPPAQ13219 1627 aa17.52■□□□□ 0.4
TOP1MT-217ENST00000523417 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
TOP1MT-217ENST00000523417 USHBP1Q8N6Y0 703 aa17.51■□□□□ 0.39
TOP1MT-217ENST00000523417 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
TOP1MT-217ENST00000523417 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
TOP1MT-217ENST00000523417 BTAF1O14981 1849 aa17.51■□□□□ 0.39
TOP1MT-217ENST00000523417 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
TOP1MT-217ENST00000523417 EIF4G2P78344 907 aaKnown RBP eCLIP17.5■□□□□ 0.39
TOP1MT-217ENST00000523417 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
TOP1MT-217ENST00000523417 ARXQ96QS3 562 aa17.5■□□□□ 0.39
TOP1MT-217ENST00000523417 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
TOP1MT-217ENST00000523417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■■□ 24.3
TOP1MT-217ENST00000523417 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
TOP1MT-217ENST00000523417 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
TOP1MT-217ENST00000523417 PCDH11YQ9BZA8 1340 aa17.49■□□□□ 0.39
TOP1MT-217ENST00000523417 CYP27B1O15528 508 aa17.49■□□□□ 0.39
TOP1MT-217ENST00000523417 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
TOP1MT-217ENST00000523417 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
TOP1MT-217ENST00000523417 YY1P25490 414 aa17.48■□□□□ 0.39
TOP1MT-217ENST00000523417 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
TOP1MT-217ENST00000523417 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
TOP1MT-217ENST00000523417 KAT6BQ8WYB5 2073 aa17.47■□□□□ 0.39
TOP1MT-217ENST00000523417 EYA1Q99502 592 aa17.46■□□□□ 0.39
TOP1MT-217ENST00000523417 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
TOP1MT-217ENST00000523417 HSPA5P11021 654 aaKnown RBP17.45■□□□□ 0.38
TOP1MT-217ENST00000523417 KCNQ4P56696 695 aa17.45■□□□□ 0.38
TOP1MT-217ENST00000523417 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
TOP1MT-217ENST00000523417 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
TOP1MT-217ENST00000523417 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
TOP1MT-217ENST00000523417 MYOM1P52179 1685 aa17.44■□□□□ 0.38
TOP1MT-217ENST00000523417 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
TOP1MT-217ENST00000523417 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
TOP1MT-217ENST00000523417 POLD1P28340 1107 aa17.43■□□□□ 0.38
TOP1MT-217ENST00000523417 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
TOP1MT-217ENST00000523417 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
TOP1MT-217ENST00000523417 PANK3Q9H999 370 aa17.42■□□□□ 0.38
TOP1MT-217ENST00000523417 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
TOP1MT-217ENST00000523417 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
TOP1MT-217ENST00000523417 PIGBQ92521 554 aa17.41■□□□□ 0.38
TOP1MT-217ENST00000523417 LY75O60449 1722 aa17.41■□□□□ 0.38
TOP1MT-217ENST00000523417 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
TOP1MT-217ENST00000523417 CCER1Q8TC90 406 aaPredicted RBP17.4■□□□□ 0.38
TOP1MT-217ENST00000523417 QSER1Q2KHR3 1735 aa17.4■□□□□ 0.38
TOP1MT-217ENST00000523417 IFNL2Q8IZJ0 200 aa17.39■□□□□ 0.37
TOP1MT-217ENST00000523417 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
TOP1MT-217ENST00000523417 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
TOP1MT-217ENST00000523417 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
TOP1MT-217ENST00000523417 PHKG2P15735 406 aa17.37■□□□□ 0.37
TOP1MT-217ENST00000523417 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
TOP1MT-217ENST00000523417 ANKRD26Q9UPS8 1709 aa17.37■□□□□ 0.37
TOP1MT-217ENST00000523417 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
TOP1MT-217ENST00000523417 ERVV-2B6SEH9 535 aa17.34■□□□□ 0.37
TOP1MT-217ENST00000523417 MAP2P11137 1827 aaKnown RBP17.34■□□□□ 0.37
TOP1MT-217ENST00000523417 ADRA2BP18089 450 aa17.34■□□□□ 0.37
TOP1MT-217ENST00000523417 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
TOP1MT-217ENST00000523417 PKD1L3Q7Z443 1732 aa17.34■□□□□ 0.37
TOP1MT-217ENST00000523417 LOC102724428A0A0B4J2F2 783 aa17.33■□□□□ 0.36
TOP1MT-217ENST00000523417 SIK1P57059 783 aa17.33■□□□□ 0.36
TOP1MT-217ENST00000523417 AMOTQ4VCS5 1084 aa17.33■□□□□ 0.36
TOP1MT-217ENST00000523417 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
TOP1MT-217ENST00000523417 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
TOP1MT-217ENST00000523417 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.36
TOP1MT-217ENST00000523417 HSP90AB1P08238 724 aaKnown RBP17.32■□□□□ 0.36
TOP1MT-217ENST00000523417 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
TOP1MT-217ENST00000523417 DCAF5Q96JK2 942 aa17.32■□□□□ 0.36
TOP1MT-217ENST00000523417 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
TOP1MT-217ENST00000523417 CD2APQ9Y5K6 639 aa17.32■□□□□ 0.36
TOP1MT-217ENST00000523417 MSH5O43196 834 aa17.31■□□□□ 0.36
TOP1MT-217ENST00000523417 SSFA2P28290 1259 aa17.31■□□□□ 0.36
TOP1MT-217ENST00000523417 GPR162Q16538 588 aa17.31■□□□□ 0.36
TOP1MT-217ENST00000523417 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
TOP1MT-217ENST00000523417 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
TOP1MT-217ENST00000523417 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
TOP1MT-217ENST00000523417 AK7Q96M32 723 aa17.3■□□□□ 0.36
TOP1MT-217ENST00000523417 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
TOP1MT-217ENST00000523417 GRIN3BO60391 1043 aa17.28■□□□□ 0.36
TOP1MT-217ENST00000523417 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
TOP1MT-217ENST00000523417 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
TOP1MT-217ENST00000523417 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
TOP1MT-217ENST00000523417 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 IL13P35225 146 aa17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 ITPK1Q13572 414 aa17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 RC3H1Q5TC82 1133 aaKnown RBP17.27■□□□□ 0.36
TOP1MT-217ENST00000523417 KDRP35968 1356 aa17.26■□□□□ 0.35
TOP1MT-217ENST00000523417 ITGB4P16144 1822 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms