RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 KCNQ4P56696 695 aa32.13■■■□□ 2.73
PVT1-218ENST00000523328 TONSLQ96HA7 1378 aa32.13■■■□□ 2.73
PVT1-218ENST00000523328 COG3Q96JB2 828 aa32.13■■■□□ 2.73
PVT1-218ENST00000523328 SYTL4Q96C24 671 aaPredicted RBP32.12■■■□□ 2.73
PVT1-218ENST00000523328 MEGF6O75095 1541 aa32.11■■■□□ 2.73
PVT1-218ENST00000523328 POLD1P28340 1107 aa32.09■■■□□ 2.73
PVT1-218ENST00000523328 TFCP2L1Q9NZI6 479 aa32.09■■■□□ 2.73
PVT1-218ENST00000523328 ST20-MTHFSA0A0A6YYL1 179 aa32.08■■■□□ 2.73
PVT1-218ENST00000523328 AMPHP49418 695 aa32.08■■■□□ 2.73
PVT1-218ENST00000523328 GPR162Q16538 588 aa32.08■■■□□ 2.73
PVT1-218ENST00000523328 ZCRB1Q8TBF4 217 aaKnown RBP32.08■■■□□ 2.73
PVT1-218ENST00000523328 GOLGB1Q14789 3259 aaKnown RBP32.06■■■□□ 2.72
PVT1-218ENST00000523328 KLHL34Q8N239 644 aa32.06■■■□□ 2.72
PVT1-218ENST00000523328 RTL1A6NKG5 1358 aa32.05■■■□□ 2.72
PVT1-218ENST00000523328 C1QTNF8P60827 252 aa32.02■■■□□ 2.72
PVT1-218ENST00000523328 NBPF6Q5VWK0 638 aa32.01■■■□□ 2.71
PVT1-218ENST00000523328 NBPF4Q96M43 638 aa32.01■■■□□ 2.71
PVT1-218ENST00000523328 CCNL1Q9UK58 526 aaPredicted RBP32.01■■■□□ 2.71
PVT1-218ENST00000523328 RRS1Q15050 365 aaKnown RBP32■■■□□ 2.71
PVT1-218ENST00000523328 NLGN2Q8NFZ4 835 aa32■■■□□ 2.71
PVT1-218ENST00000523328 SLC24A1O60721 1099 aa31.99■■■□□ 2.71
PVT1-218ENST00000523328 USP47Q96K76 1375 aa31.97■■■□□ 2.71
PVT1-218ENST00000523328 FYB1O15117 783 aa31.97■■■□□ 2.71
PVT1-218ENST00000523328 CGNL1Q0VF96 1302 aa31.97■■■□□ 2.71
PVT1-218ENST00000523328 SENP3-EIF4A1A0A087X0R7 540 aa31.96■■■□□ 2.71
PVT1-218ENST00000523328 PELP1Q8IZL8 1130 aaKnown RBP31.96■■■□□ 2.71
PVT1-218ENST00000523328 USHBP1Q8N6Y0 703 aa31.96■■■□□ 2.71
PVT1-218ENST00000523328 COL23A1Q86Y22 540 aaPredicted RBP31.95■■■□□ 2.71
PVT1-218ENST00000523328 GGNBP2Q9H3C7 697 aa31.95■■■□□ 2.71
PVT1-218ENST00000523328 C5P01031 1676 aa31.95■■■□□ 2.7
PVT1-218ENST00000523328 TAF1LQ8IZX4 1826 aa31.93■■■□□ 2.7
PVT1-218ENST00000523328 RAPGEF4Q8WZA2 1011 aa31.92■■■□□ 2.7
PVT1-218ENST00000523328 SMG6Q86US8 1419 aaKnown RBP31.92■■■□□ 2.7
PVT1-218ENST00000523328 KIF20BQ96Q89 1820 aa31.91■■■□□ 2.7
PVT1-218ENST00000523328 MSH5O43196 834 aa31.89■■■□□ 2.7
PVT1-218ENST00000523328 YBX3P16989 372 aaKnown RBP eCLIP31.89■■■□□ 2.7
PVT1-218ENST00000523328 TATP17735 454 aaPredicted RBP31.88■■■□□ 2.69
PVT1-218ENST00000523328 HSP90AB2PQ58FF8 381 aa31.88■■■□□ 2.69
PVT1-218ENST00000523328 INSRP06213 1382 aa31.88■■■□□ 2.69
PVT1-218ENST00000523328 PCDH11XQ9BZA7 1347 aa31.86■■■□□ 2.69
PVT1-218ENST00000523328 PCDH11YQ9BZA8 1340 aa31.86■■■□□ 2.69
PVT1-218ENST00000523328 TMF1P82094 1093 aa31.86■■■□□ 2.69
PVT1-218ENST00000523328 MSL1Q68DK7 614 aa31.86■■■□□ 2.69
PVT1-218ENST00000523328 ITGB4P16144 1822 aa31.86■■■□□ 2.69
PVT1-218ENST00000523328 TOGARAM1Q9Y4F4 1720 aa31.86■■■□□ 2.69
PVT1-218ENST00000523328 FLT4P35916 1363 aa31.85■■■□□ 2.69
PVT1-218ENST00000523328 GIGYF1O75420 1035 aaPredicted RBP31.85■■■□□ 2.69
PVT1-218ENST00000523328 KIF24Q5T7B8 1368 aa31.83■■■□□ 2.69
PVT1-218ENST00000523328 PALLDQ8WX93 1383 aa31.83■■■□□ 2.69
PVT1-218ENST00000523328 GRIN3BO60391 1043 aa31.83■■■□□ 2.69
PVT1-218ENST00000523328 CYP27B1O15528 508 aa31.82■■■□□ 2.68
PVT1-218ENST00000523328 PKD1L3Q7Z443 1732 aa31.82■■■□□ 2.68
PVT1-218ENST00000523328 C4BP0C0L5 1744 aa31.8■■■□□ 2.68
PVT1-218ENST00000523328 MPRIPQ6WCQ1 1025 aa31.8■■■□□ 2.68
PVT1-218ENST00000523328 FLAD1Q8NFF5 587 aa31.79■■■□□ 2.68
PVT1-218ENST00000523328 HMGB2P26583 209 aaKnown RBP31.78■■■□□ 2.68
PVT1-218ENST00000523328 CD2APQ9Y5K6 639 aa31.77■■■□□ 2.68
PVT1-218ENST00000523328 UBR3Q6ZT12 1888 aa31.77■■■□□ 2.68
PVT1-218ENST00000523328 NCAPD2Q15021 1401 aa31.75■■■□□ 2.67
PVT1-218ENST00000523328 EMILIN1Q9Y6C2 1016 aa31.75■■■□□ 2.67
PVT1-218ENST00000523328 AMIGO3Q86WK7 504 aa31.74■■■□□ 2.67
PVT1-218ENST00000523328 MAP2P11137 1827 aaKnown RBP31.74■■■□□ 2.67
PVT1-218ENST00000523328 ANKRD26Q9UPS8 1709 aa31.74■■■□□ 2.67
PVT1-218ENST00000523328 SMARCC1Q92922 1105 aaPredicted RBP31.73■■■□□ 2.67
PVT1-218ENST00000523328 CARD14Q9BXL6 1004 aa31.73■■■□□ 2.67
PVT1-218ENST00000523328 CDCA8Q53HL2 280 aa31.72■■■□□ 2.67
PVT1-218ENST00000523328 ATP10DQ9P241 1426 aa31.7■■■□□ 2.67
PVT1-218ENST00000523328 NKX1-1Q15270 411 aaPredicted RBP31.7■■■□□ 2.67
PVT1-218ENST00000523328 PIGBQ92521 554 aa31.7■■■□□ 2.67
PVT1-218ENST00000523328 NSD3Q9BZ95 1437 aa31.69■■■□□ 2.66
PVT1-218ENST00000523328 AK7Q96M32 723 aa31.69■■■□□ 2.66
PVT1-218ENST00000523328 CEP350Q5VT06 3117 aa31.68■■■□□ 2.66
PVT1-218ENST00000523328 SMIM5Q71RC9 77 aa31.67■■■□□ 2.66
PVT1-218ENST00000523328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.64■■■□□ 2.66
PVT1-218ENST00000523328 PHF14O94880 888 aa31.64■■■□□ 2.66
PVT1-218ENST00000523328 SPG7Q9UQ90 795 aa31.64■■■□□ 2.66
PVT1-218ENST00000523328 ADCY9O60503 1353 aa31.64■■■□□ 2.66
PVT1-218ENST00000523328 WASHC2AQ641Q2 1341 aa31.63■■■□□ 2.65
PVT1-218ENST00000523328 LOC102724428A0A0B4J2F2 783 aa31.62■■■□□ 2.65
PVT1-218ENST00000523328 PPM1GO15355 546 aaPredicted RBP31.62■■■□□ 2.65
PVT1-218ENST00000523328 SIK1P57059 783 aa31.62■■■□□ 2.65
PVT1-218ENST00000523328 LINC00116Q8NCU8 138 aa31.62■■■□□ 2.65
PVT1-218ENST00000523328 SSFA2P28290 1259 aa31.61■■■□□ 2.65
PVT1-218ENST00000523328 EYA1Q99502 592 aa31.61■■■□□ 2.65
PVT1-218ENST00000523328 IGSF1Q8N6C5 1336 aa31.6■■■□□ 2.65
PVT1-218ENST00000523328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.6■■■□□ 2.65
PVT1-218ENST00000523328 GPBP1L1Q9HC44 474 aaPredicted RBP31.58■■■□□ 2.65
PVT1-218ENST00000523328 TMOD3Q9NYL9 352 aa31.57■■■□□ 2.64
PVT1-218ENST00000523328 ASAP1Q9ULH1 1129 aa31.57■■■□□ 2.64
PVT1-218ENST00000523328 ITPK1Q13572 414 aa31.56■■■□□ 2.64
PVT1-218ENST00000523328 PHKG2P15735 406 aa31.54■■■□□ 2.64
PVT1-218ENST00000523328 POLKQ9UBT6 870 aa31.54■■■□□ 2.64
PVT1-218ENST00000523328 WWC3Q9ULE0 1092 aa31.54■■■□□ 2.64
PVT1-218ENST00000523328 IFNL2Q8IZJ0 200 aa31.53■■■□□ 2.64
PVT1-218ENST00000523328 GNPATO15228 680 aa31.52■■■□□ 2.64
PVT1-218ENST00000523328 ATP6V1AP38606 617 aa31.52■■■□□ 2.64
PVT1-218ENST00000523328 ATG3Q9NT62 314 aa31.51■■■□□ 2.63
PVT1-218ENST00000523328 KIF13BQ9NQT8 1826 aa31.51■■■□□ 2.63
PVT1-218ENST00000523328 ZNF526Q8TF50 670 aaPredicted RBP31.5■■■□□ 2.63
PVT1-218ENST00000523328 KIAA1551Q9HCM1 1747 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms