RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
SHPRH-210ENST00000523276 NOB1Q9ULX3 412 aaKnown RBP8.51□□□□□ -1.05
SHPRH-210ENST00000523276 IPO8O15397 1037 aaKnown RBP8.5□□□□□ -1.05
SHPRH-210ENST00000523276 RWDD1Q9H446 243 aaPredicted RBP8.5□□□□□ -1.05
SHPRH-210ENST00000523276 KCNA6P17658 529 aa8.49□□□□□ -1.05
SHPRH-210ENST00000523276 DDX19BQ9UMR2 479 aa8.49□□□□□ -1.05
SHPRH-210ENST00000523276 LAS1LQ9Y4W2 734 aaKnown RBP8.49□□□□□ -1.05
SHPRH-210ENST00000523276 PEAK1Q9H792 1746 aa8.49□□□□□ -1.05
SHPRH-210ENST00000523276 RIMS1Q86UR5 1692 aaKnown RBP8.49□□□□□ -1.05
SHPRH-210ENST00000523276 SULT6B1Q6IMI4 303 aa8.49□□□□□ -1.05
SHPRH-210ENST00000523276 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
SHPRH-210ENST00000523276 NGDNQ8NEJ9 315 aaKnown RBP8.49□□□□□ -1.05
SHPRH-210ENST00000523276 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
SHPRH-210ENST00000523276 VAMP4O75379 141 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 HSP90AB2PQ58FF8 381 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 ITPRIPQ8IWB1 547 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 TMEM57Q8N5G2 664 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 ARHGEF10O15013 1369 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 MAP3K19Q56UN5 1328 aa8.48□□□□□ -1.05
SHPRH-210ENST00000523276 MRPL50Q8N5N7 158 aaKnown RBP8.47□□□□□ -1.05
SHPRH-210ENST00000523276 DDRGK1Q96HY6 314 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 RGPD1P0DJD0 1748 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 FLT4P35916 1363 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 FAM83GA6ND36 823 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 HDAC1Q13547 482 aaPredicted RBP8.47□□□□□ -1.05
SHPRH-210ENST00000523276 ANKLE2Q86XL3 938 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 TSPYL6Q8N831 410 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 ARHGAP45Q92619 1136 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 CREBZFQ9NS37 354 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 ZBTB40Q9NUA8 1239 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
SHPRH-210ENST00000523276 ZNF142P52746 1687 aaPredicted RBP8.46□□□□□ -1.05
SHPRH-210ENST00000523276 FMN2Q9NZ56 1722 aa8.46□□□□□ -1.06
SHPRH-210ENST00000523276 PIK3C2AO00443 1686 aa8.46□□□□□ -1.06
SHPRH-210ENST00000523276 SOX12O15370 315 aa8.46□□□□□ -1.06
SHPRH-210ENST00000523276 DCTN1Q14203 1278 aa8.46□□□□□ -1.06
SHPRH-210ENST00000523276 TWISTNBQ3B726 338 aaPredicted RBP8.46□□□□□ -1.06
SHPRH-210ENST00000523276 C8orf58Q8NAV2 365 aa8.46□□□□□ -1.06
SHPRH-210ENST00000523276 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
SHPRH-210ENST00000523276 KDRP35968 1356 aa8.45□□□□□ -1.06
SHPRH-210ENST00000523276 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
SHPRH-210ENST00000523276 KIF24Q5T7B8 1368 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 USP54Q70EL1 1684 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 ABCC4O15439 1325 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 ELL2O00472 640 aaPredicted RBP8.44□□□□□ -1.06
SHPRH-210ENST00000523276 CHL1O00533 1208 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 AMPHP49418 695 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 NLRP6P59044 892 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 SMC5Q8IY18 1101 aa8.44□□□□□ -1.06
SHPRH-210ENST00000523276 CHMP4BQ9H444 224 aaKnown RBP8.44□□□□□ -1.06
SHPRH-210ENST00000523276 DLG5Q8TDM6 1919 aa8.43□□□□□ -1.06
SHPRH-210ENST00000523276 MCM10Q7L590 875 aa8.43□□□□□ -1.06
SHPRH-210ENST00000523276 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
SHPRH-210ENST00000523276 CRB1P82279 1406 aa8.43□□□□□ -1.06
SHPRH-210ENST00000523276 ADGRL3Q9HAR2 1447 aa8.43□□□□□ -1.06
SHPRH-210ENST00000523276 RGPD8O14715 1765 aaPredicted RBP8.43□□□□□ -1.06
SHPRH-210ENST00000523276 KIAA0232Q92628 1395 aa8.42□□□□□ -1.06
SHPRH-210ENST00000523276 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
SHPRH-210ENST00000523276 EYA1Q99502 592 aa8.42□□□□□ -1.06
SHPRH-210ENST00000523276 API5Q9BZZ5 524 aaKnown RBP8.42□□□□□ -1.06
SHPRH-210ENST00000523276 USP19O94966 1318 aa8.42□□□□□ -1.06
SHPRH-210ENST00000523276 HOXC9P31274 260 aa8.42□□□□□ -1.06
SHPRH-210ENST00000523276 MNX1P50219 401 aaPredicted RBP8.42□□□□□ -1.06
SHPRH-210ENST00000523276 EVX2Q03828 476 aa8.42□□□□□ -1.06
SHPRH-210ENST00000523276 MTHFSDQ2M296 383 aaKnown RBP8.42□□□□□ -1.06
SHPRH-210ENST00000523276 CHD2O14647 1828 aaKnown RBP8.41□□□□□ -1.06
SHPRH-210ENST00000523276 MARF1Q9Y4F3 1742 aaKnown RBP8.41□□□□□ -1.06
SHPRH-210ENST00000523276 RTL1A6NKG5 1358 aa8.41□□□□□ -1.06
SHPRH-210ENST00000523276 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
SHPRH-210ENST00000523276 PLCD3Q8N3E9 789 aa8.41□□□□□ -1.06
SHPRH-210ENST00000523276 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
SHPRH-210ENST00000523276 GAS2L2Q8NHY3 880 aa8.41□□□□□ -1.06
SHPRH-210ENST00000523276 NPHP4O75161 1426 aaPredicted RBP8.41□□□□□ -1.06
SHPRH-210ENST00000523276 VIRMAQ69YN4 1812 aaKnown RBP8.41□□□□□ -1.06
SHPRH-210ENST00000523276 SEC24BO95487 1268 aa8.41□□□□□ -1.06
SHPRH-210ENST00000523276 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
SHPRH-210ENST00000523276 FARP1Q9Y4F1 1045 aaPredicted RBP8.41□□□□□ -1.06
SHPRH-210ENST00000523276 NWD1Q149M9 1564 aa8.4□□□□□ -1.06
SHPRH-210ENST00000523276 FOXO3O43524 673 aa8.4□□□□□ -1.06
SHPRH-210ENST00000523276 NUCB1Q02818 461 aa8.4□□□□□ -1.06
SHPRH-210ENST00000523276 HS6ST3Q8IZP7 471 aa8.4□□□□□ -1.06
SHPRH-210ENST00000523276 RTF1Q92541 710 aaKnown RBP8.4□□□□□ -1.06
SHPRH-210ENST00000523276 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
SHPRH-210ENST00000523276 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
SHPRH-210ENST00000523276 RGS12O14924 1447 aa8.39□□□□□ -1.07
SHPRH-210ENST00000523276 INTS3Q68E01 1043 aaKnown RBP8.39□□□□□ -1.07
SHPRH-210ENST00000523276 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
SHPRH-210ENST00000523276 NFAT5O94916 1531 aa8.39□□□□□ -1.07
SHPRH-210ENST00000523276 C19orf67A6NJJ6 358 aa8.38□□□□□ -1.07
SHPRH-210ENST00000523276 GCC1Q96CN9 775 aa8.38□□□□□ -1.07
SHPRH-210ENST00000523276 C1orf115Q9H7X2 142 aa8.38□□□□□ -1.07
SHPRH-210ENST00000523276 TSPYL4Q9UJ04 414 aa8.38□□□□□ -1.07
SHPRH-210ENST00000523276 PTPRCP08575 1304 aa8.38□□□□□ -1.07
SHPRH-210ENST00000523276 HAX1O00165 279 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 ESCO1Q5FWF5 840 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 CHD1LQ86WJ1 897 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 SIRT2Q8IXJ6 389 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms