RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 BTAF1O14981 1849 aa15.5■□□□□ 0.07
CD74-209ENST00000523208 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
CD74-209ENST00000523208 IL2RBP14784 551 aa15.48■□□□□ 0.07
CD74-209ENST00000523208 RXRBP28702 533 aa15.48■□□□□ 0.07
CD74-209ENST00000523208 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
CD74-209ENST00000523208 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
CD74-209ENST00000523208 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
CD74-209ENST00000523208 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
CD74-209ENST00000523208 WDR43Q15061 677 aaKnown RBP eCLIP15.47■□□□□ 0.07
CD74-209ENST00000523208 SULT6B1Q6IMI4 303 aa15.47■□□□□ 0.07
CD74-209ENST00000523208 RAPGEF4Q8WZA2 1011 aa15.47■□□□□ 0.07
CD74-209ENST00000523208 THRAP3Q9Y2W1 955 aaKnown RBP15.47■□□□□ 0.07
CD74-209ENST00000523208 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
CD74-209ENST00000523208 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
CD74-209ENST00000523208 PAPPAQ13219 1627 aa15.45■□□□□ 0.06
CD74-209ENST00000523208 SEPT12Q8IYM1 358 aa15.44■□□□□ 0.06
CD74-209ENST00000523208 MIER1Q8N108 512 aa15.44■□□□□ 0.06
CD74-209ENST00000523208 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
CD74-209ENST00000523208 DDB1Q16531 1140 aa15.43■□□□□ 0.06
CD74-209ENST00000523208 PLEKHG2Q9H7P9 1386 aa15.42■□□□□ 0.06
CD74-209ENST00000523208 RSPH6AQ9H0K4 717 aa15.42■□□□□ 0.06
CD74-209ENST00000523208 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
CD74-209ENST00000523208 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
CD74-209ENST00000523208 RGPD3A6NKT7 1758 aaPredicted RBP15.41■□□□□ 0.06
CD74-209ENST00000523208 RGPD4Q7Z3J3 1758 aa15.41■□□□□ 0.06
CD74-209ENST00000523208 CDCA7Q9BWT1 371 aaPredicted RBP15.41■□□□□ 0.06
CD74-209ENST00000523208 KDM3BQ7LBC6 1761 aa15.41■□□□□ 0.06
CD74-209ENST00000523208 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
CD74-209ENST00000523208 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
CD74-209ENST00000523208 MRC1P22897 1456 aa15.4■□□□□ 0.06
CD74-209ENST00000523208 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
CD74-209ENST00000523208 KDM6AO15550 1401 aaPredicted RBP15.39■□□□□ 0.05
CD74-209ENST00000523208 LY75O60449 1722 aa15.39■□□□□ 0.05
CD74-209ENST00000523208 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
CD74-209ENST00000523208 RREB1Q92766 1687 aa15.38■□□□□ 0.05
CD74-209ENST00000523208 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
CD74-209ENST00000523208 PDE3BQ13370 1112 aa15.38■□□□□ 0.05
CD74-209ENST00000523208 FAM182BQ5T319 152 aa15.38■□□□□ 0.05
CD74-209ENST00000523208 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
CD74-209ENST00000523208 NEFMP07197 916 aa15.37■□□□□ 0.05
CD74-209ENST00000523208 KRT27Q7Z3Y8 459 aa15.37■□□□□ 0.05
CD74-209ENST00000523208 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
CD74-209ENST00000523208 ZCRB1Q8TBF4 217 aaKnown RBP15.37■□□□□ 0.05
CD74-209ENST00000523208 DDX54Q8TDD1 881 aaKnown RBP15.37■□□□□ 0.05
CD74-209ENST00000523208 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
CD74-209ENST00000523208 C5P01031 1676 aa15.36■□□□□ 0.05
CD74-209ENST00000523208 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
CD74-209ENST00000523208 TAF1LQ8IZX4 1826 aa15.36■□□□□ 0.05
CD74-209ENST00000523208 NUP188Q5SRE5 1749 aa15.35■□□□□ 0.05
CD74-209ENST00000523208 EXOC5O00471 708 aa15.35■□□□□ 0.05
CD74-209ENST00000523208 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
CD74-209ENST00000523208 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
CD74-209ENST00000523208 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
CD74-209ENST00000523208 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
CD74-209ENST00000523208 MARCH10Q8NA82 808 aaPredicted RBP15.34■□□□□ 0.05
CD74-209ENST00000523208 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
CD74-209ENST00000523208 TJP1Q07157 1748 aa15.34■□□□□ 0.05
CD74-209ENST00000523208 CYP27B1O15528 508 aa15.33■□□□□ 0.04
CD74-209ENST00000523208 FCHSD2O94868 740 aa15.33■□□□□ 0.04
CD74-209ENST00000523208 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.04
CD74-209ENST00000523208 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.04
CD74-209ENST00000523208 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
CD74-209ENST00000523208 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
CD74-209ENST00000523208 PNISRQ8TF01 805 aaKnown RBP15.33■□□□□ 0.04
CD74-209ENST00000523208 COL5A3P25940 1745 aaPredicted RBP15.32■□□□□ 0.04
CD74-209ENST00000523208 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
CD74-209ENST00000523208 PHKG2P15735 406 aa15.32■□□□□ 0.04
CD74-209ENST00000523208 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
CD74-209ENST00000523208 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
CD74-209ENST00000523208 RRP7AQ9Y3A4 280 aaKnown RBP15.32■□□□□ 0.04
CD74-209ENST00000523208 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
CD74-209ENST00000523208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
CD74-209ENST00000523208 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
CD74-209ENST00000523208 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
CD74-209ENST00000523208 ACSBG1Q96GR2 724 aa15.3■□□□□ 0.04
CD74-209ENST00000523208 PNNQ9H307 717 aaKnown RBP15.3■□□□□ 0.04
CD74-209ENST00000523208 BCL9O00512 1426 aa15.29■□□□□ 0.04
CD74-209ENST00000523208 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
CD74-209ENST00000523208 NEUROD2Q15784 382 aa15.28■□□□□ 0.04
CD74-209ENST00000523208 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
CD74-209ENST00000523208 MPRIPQ6WCQ1 1025 aa15.28■□□□□ 0.04
CD74-209ENST00000523208 SYTL4Q96C24 671 aaPredicted RBP15.28■□□□□ 0.04
CD74-209ENST00000523208 ZNF831Q5JPB2 1677 aa15.26■□□□□ 0.03
CD74-209ENST00000523208 GNAT3A8MTJ3 354 aa15.26■□□□□ 0.03
CD74-209ENST00000523208 APAF1O14727 1248 aa15.26■□□□□ 0.03
CD74-209ENST00000523208 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
CD74-209ENST00000523208 FAM196AQ6ZSG2 479 aa15.26■□□□□ 0.03
CD74-209ENST00000523208 TRIM37O94972 964 aa15.25■□□□□ 0.03
CD74-209ENST00000523208 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
CD74-209ENST00000523208 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
CD74-209ENST00000523208 KCPQ6ZWJ8 1503 aa15.25■□□□□ 0.03
CD74-209ENST00000523208 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
CD74-209ENST00000523208 MCM10Q7L590 875 aa15.24■□□□□ 0.03
CD74-209ENST00000523208 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
CD74-209ENST00000523208 DCAF5Q96JK2 942 aa15.24■□□□□ 0.03
CD74-209ENST00000523208 THUMPD2Q9BTF0 503 aaKnown RBP15.24■□□□□ 0.03
CD74-209ENST00000523208 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
CD74-209ENST00000523208 RIPK4P57078 832 aa15.23■□□□□ 0.03
CD74-209ENST00000523208 LMOD3Q0VAK6 560 aa15.23■□□□□ 0.03
CD74-209ENST00000523208 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms