RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 HDGFL1Q5TGJ6 251 aa8.08□□□□□ -1.12
SKP1-210ENST00000522855 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
SKP1-210ENST00000522855 ZNF784Q8NCA9 323 aaPredicted RBP8.08□□□□□ -1.12
SKP1-210ENST00000522855 TMPRSS4Q9NRS4 437 aa8.07□□□□□ -1.12
SKP1-210ENST00000522855 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
SKP1-210ENST00000522855 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
SKP1-210ENST00000522855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.127e-8■■■■■ 40
SKP1-210ENST00000522855 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
SKP1-210ENST00000522855 ALG2Q9H553 416 aa8.06□□□□□ -1.12
SKP1-210ENST00000522855 ADH1AP07327 375 aa8.05□□□□□ -1.12
SKP1-210ENST00000522855 CTSOP43234 321 aaPredicted RBP8.05□□□□□ -1.12
SKP1-210ENST00000522855 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
SKP1-210ENST00000522855 SEPT12Q8IYM1 358 aa8.05□□□□□ -1.12
SKP1-210ENST00000522855 ADAMTS19Q8TE59 1207 aa8.05□□□□□ -1.12
SKP1-210ENST00000522855 PPP1R15AO75807 674 aaPredicted RBP8.04□□□□□ -1.12
SKP1-210ENST00000522855 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
SKP1-210ENST00000522855 PTSQ03393 145 aa8.04□□□□□ -1.12
SKP1-210ENST00000522855 ZSCAN1Q8NBB4 408 aa8.04□□□□□ -1.12
SKP1-210ENST00000522855 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
SKP1-210ENST00000522855 MCCD1P59942 119 aaPredicted RBP8.03□□□□□ -1.12
SKP1-210ENST00000522855 FOXD4L5Q5VV16 416 aaPredicted RBP8.03□□□□□ -1.12
SKP1-210ENST00000522855 INSM2Q96T92 566 aaPredicted RBP8.03□□□□□ -1.12
SKP1-210ENST00000522855 SLC35F4A4IF30 521 aa8.02□□□□□ -1.13
SKP1-210ENST00000522855 RELBQ01201 579 aa8.02□□□□□ -1.13
SKP1-210ENST00000522855 SENP3-EIF4A1A0A087X0R7 540 aa8.01□□□□□ -1.13
SKP1-210ENST00000522855 FIGNL2A6NMB9 653 aa8.01□□□□□ -1.13
SKP1-210ENST00000522855 RAB15P59190 212 aa8.01□□□□□ -1.13
SKP1-210ENST00000522855 KRT76Q01546 638 aa8.01□□□□□ -1.13
SKP1-210ENST00000522855 GPR161Q8N6U8 529 aaKnown RBP8.01□□□□□ -1.13
SKP1-210ENST00000522855 NANOS1Q8WY41 292 aaKnown RBP8.01□□□□□ -1.13
SKP1-210ENST00000522855 PPP1R12CQ9BZL4 782 aa8.01□□□□□ -1.13
SKP1-210ENST00000522855 GIGYF1O75420 1035 aaPredicted RBP8□□□□□ -1.13
SKP1-210ENST00000522855 PTGIRP43119 386 aa8□□□□□ -1.13
SKP1-210ENST00000522855 CCDC155Q8N6L0 562 aa8□□□□□ -1.13
SKP1-210ENST00000522855 PALM3A6NDB9 673 aaPredicted RBP7.99□□□□□ -1.13
SKP1-210ENST00000522855 PBXIP1Q96AQ6 731 aa7.99□□□□□ -1.13
SKP1-210ENST00000522855 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
SKP1-210ENST00000522855 PCDHB9Q9Y5E1 797 aa7.99□□□□□ -1.13
SKP1-210ENST00000522855 ERVK-9P63128 1117 aa7.98□□□□□ -1.13
SKP1-210ENST00000522855 NFATC2IPQ8NCF5 419 aa7.98□□□□□ -1.13
SKP1-210ENST00000522855 UCN2Q96RP3 112 aa7.98□□□□□ -1.13
SKP1-210ENST00000522855 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
SKP1-210ENST00000522855 CFAP70Q5T0N1 1121 aa7.97□□□□□ -1.13
SKP1-210ENST00000522855 POLMQ9NP87 494 aaPredicted RBP7.97□□□□□ -1.13
SKP1-210ENST00000522855 ACIN1Q9UKV3 1341 aaKnown RBP7.97□□□□□ -1.13
SKP1-210ENST00000522855 ATP9BO43861 1147 aa7.96□□□□□ -1.14
SKP1-210ENST00000522855 PDIA4P13667 645 aaKnown RBP7.96□□□□□ -1.14
SKP1-210ENST00000522855 ITGA6P23229 1130 aa7.96□□□□□ -1.14
SKP1-210ENST00000522855 PDE4CQ08493 712 aa7.96□□□□□ -1.14
SKP1-210ENST00000522855 TFIP11Q9UBB9 837 aaKnown RBP7.96□□□□□ -1.14
SKP1-210ENST00000522855 FAM181BA6NEQ2 426 aa7.95□□□□□ -1.14
SKP1-210ENST00000522855 RFX1P22670 979 aa7.95□□□□□ -1.14
SKP1-210ENST00000522855 LMOD1P29536 600 aaPredicted RBP7.95□□□□□ -1.14
SKP1-210ENST00000522855 RNF144AP50876 292 aaPredicted RBP7.95□□□□□ -1.14
SKP1-210ENST00000522855 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
SKP1-210ENST00000522855 CCDC125Q86Z20 511 aa7.95□□□□□ -1.14
SKP1-210ENST00000522855 MAFBQ9Y5Q3 323 aaPredicted RBP7.95□□□□□ -1.14
SKP1-210ENST00000522855 SCTRP47872 440 aa7.94□□□□□ -1.14
SKP1-210ENST00000522855 RNFT1Q5M7Z0 435 aa7.94□□□□□ -1.14
SKP1-210ENST00000522855 ATP5J2-PTCD1G3V325 749 aa7.93□□□□□ -1.14
SKP1-210ENST00000522855 CC2D2BQ6DHV5 1058 aa7.93□□□□□ -1.14
SKP1-210ENST00000522855 TBC1D9Q6ZT07 1266 aa7.93□□□□□ -1.14
SKP1-210ENST00000522855 RNF135Q8IUD6 432 aa7.93□□□□□ -1.14
SKP1-210ENST00000522855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
SKP1-210ENST00000522855 SKIP12755 728 aa7.92□□□□□ -1.14
SKP1-210ENST00000522855 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
SKP1-210ENST00000522855 OSBPL3Q9H4L5 887 aa7.92□□□□□ -1.14
SKP1-210ENST00000522855 CEP126Q9P2H0 1117 aa7.92□□□□□ -1.14
SKP1-210ENST00000522855 USP17L5A8MUK1 530 aa7.91□□□□□ -1.14
SKP1-210ENST00000522855 GPC1P35052 558 aa7.91□□□□□ -1.14
SKP1-210ENST00000522855 RNF20Q5VTR2 975 aa7.91□□□□□ -1.14
SKP1-210ENST00000522855 LYSMD3Q7Z3D4 306 aa7.91□□□□□ -1.14
SKP1-210ENST00000522855 PLEKHM2Q8IWE5 1019 aa7.91□□□□□ -1.14
SKP1-210ENST00000522855 RETREG2Q8NC44 543 aa7.91□□□□□ -1.14
SKP1-210ENST00000522855 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
SKP1-210ENST00000522855 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 PIK3CDO00329 1044 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 LZTS3O60299 673 aaPredicted RBP7.9□□□□□ -1.14
SKP1-210ENST00000522855 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 MAP7D1Q3KQU3 841 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 USP17L2Q6R6M4 530 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 CNTNAP3BQ96NU0 1288 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 CNTNAP3Q9BZ76 1288 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 USTQ9Y2C2 406 aa7.9□□□□□ -1.14
SKP1-210ENST00000522855 A0A1W2PRU2 124 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 GSK3AP49840 483 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 CLN3Q13286 438 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 VWA5B2Q8N398 1253 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 TRIM52Q96A61 297 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 TRAIPQ9BWF2 469 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 VRTNQ9H8Y1 702 aa7.89□□□□□ -1.15
SKP1-210ENST00000522855 CYP2U1Q7Z449 544 aa7.88□□□□□ -1.15
SKP1-210ENST00000522855 PLPP7Q8NBV4 271 aa7.88□□□□□ -1.15
SKP1-210ENST00000522855 CCDC85AQ96PX6 553 aaPredicted RBP7.88□□□□□ -1.15
SKP1-210ENST00000522855 PCDHB11Q9Y5F2 797 aa7.88□□□□□ -1.15
SKP1-210ENST00000522855 ATG7O95352 703 aa7.87□□□□□ -1.15
SKP1-210ENST00000522855 SRPK2P78362 688 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms