RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.65□□□□□ -1.51
SKP1-209ENST00000522552 hCG_2014768A0A024R1R8 64 aa5.64□□□□□ -1.51
SKP1-209ENST00000522552 SOWAHBA6NEL2 793 aa5.64□□□□□ -1.51
SKP1-209ENST00000522552 TPD52L2O43399 206 aaKnown RBP5.64□□□□□ -1.51
SKP1-209ENST00000522552 IGBP1P78318 339 aa5.64□□□□□ -1.51
SKP1-209ENST00000522552 PTPROQ16827 1216 aa5.64□□□□□ -1.51
SKP1-209ENST00000522552 SWT1Q5T5J6 900 aaKnown RBP5.64□□□□□ -1.51
SKP1-209ENST00000522552 KCNB2Q92953 911 aa5.64□□□□□ -1.51
SKP1-209ENST00000522552 HLA-CQ95604 372 aa5.64□□□□□ -1.51
SKP1-209ENST00000522552 ATP5J2-PTCD1G3V325 749 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 FBXO45P0C2W1 286 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 USP46P62068 366 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 DPYDQ12882 1025 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 NCOA4Q13772 614 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 TAS1R3Q7RTX0 852 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 RGL4Q8IZJ4 473 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 VTI1AQ96AJ9 217 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 ARMC5Q96C12 935 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 CAPN10Q9HC96 672 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 NLRP2Q9NX02 1062 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 C21orf2O43822 256 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 P4HBP07237 508 aaKnown RBP5.63□□□□□ -1.51
SKP1-209ENST00000522552 HDGFP51858 240 aaKnown RBP5.63□□□□□ -1.51
SKP1-209ENST00000522552 ARHGAP4P98171 946 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 EXOC8Q8IYI6 725 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 TMEM87AQ8NBN3 555 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 RDH13Q8NBN7 331 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 TGIF2Q9GZN2 237 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 WBP1LQ9NX94 342 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 HCSTQ9UBK5 93 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 HPS5Q9UPZ3 1129 aa5.63□□□□□ -1.51
SKP1-209ENST00000522552 PRMT3O60678 531 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 DNAJB2P25686 324 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 PSME1Q06323 249 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 TCEAL1Q15170 157 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 OCLNQ16625 522 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 RNF135Q8IUD6 432 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 PMFBP1Q8TBY8 1022 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 ZSWIM4Q9H7M6 989 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 CCSER2Q9H7U1 834 aa5.62□□□□□ -1.51
SKP1-209ENST00000522552 PARNO95453 639 aaKnown RBP5.61□□□□□ -1.51
SKP1-209ENST00000522552 FANCCQ00597 558 aa5.61□□□□□ -1.51
SKP1-209ENST00000522552 GORABQ5T7V8 394 aa5.61□□□□□ -1.51
SKP1-209ENST00000522552 CCDC181Q5TID7 509 aa5.61□□□□□ -1.51
SKP1-209ENST00000522552 TMEM134Q9H6X4 195 aa5.61□□□□□ -1.51
SKP1-209ENST00000522552 CXXC1Q9P0U4 656 aaPredicted RBP5.61□□□□□ -1.51
SKP1-209ENST00000522552 PER1O15534 1290 aaPredicted RBP5.6□□□□□ -1.51
SKP1-209ENST00000522552 PPP4CP60510 307 aa5.6□□□□□ -1.51
SKP1-209ENST00000522552 IRX6P78412 446 aaPredicted RBP5.6□□□□□ -1.51
SKP1-209ENST00000522552 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
SKP1-209ENST00000522552 ZNF594Q96JF6 807 aaPredicted RBP5.6□□□□□ -1.51
SKP1-209ENST00000522552 FAM161BQ96MY7 647 aa5.6□□□□□ -1.51
SKP1-209ENST00000522552 GMLQ99445 158 aa5.6□□□□□ -1.51
SKP1-209ENST00000522552 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
SKP1-209ENST00000522552 DNAJA1P31689 397 aaKnown RBP5.59□□□□□ -1.51
SKP1-209ENST00000522552 GCGRP47871 477 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 TNNI2P48788 182 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 CLDN10P78369 228 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 RBL2Q08999 1139 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 KCNH2Q12809 1159 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 MTMR3Q13615 1198 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 GTF3C2Q8WUA4 911 aaPredicted RBP5.59□□□□□ -1.51
SKP1-209ENST00000522552 RNF34Q969K3 372 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 PRIMPOLQ96LW4 560 aa5.59□□□□□ -1.51
SKP1-209ENST00000522552 METTL5Q9NRN9 209 aaKnown RBP5.59□□□□□ -1.51
SKP1-209ENST00000522552 TSR3Q9UJK0 312 aaKnown RBP5.59□□□□□ -1.51
SKP1-209ENST00000522552 DNMT3AQ9Y6K1 912 aaPredicted RBP5.59□□□□□ -1.51
SKP1-209ENST00000522552 ZBBXA8MT70 800 aa5.59□□□□□ -1.52
SKP1-209ENST00000522552 C6orf229H3BNL8 230 aa5.59□□□□□ -1.52
SKP1-209ENST00000522552 MAP4K4O95819 1239 aaPredicted RBP5.59□□□□□ -1.52
SKP1-209ENST00000522552 IBSPP21815 317 aaPredicted RBP5.59□□□□□ -1.52
SKP1-209ENST00000522552 ANAPC15P60006 121 aa5.59□□□□□ -1.52
SKP1-209ENST00000522552 ZNF746Q6NUN9 644 aaPredicted RBP5.59□□□□□ -1.52
SKP1-209ENST00000522552 NOP58Q9Y2X3 529 aaKnown RBP5.59□□□□□ -1.52
SKP1-209ENST00000522552 FKBP4Q02790 459 aaKnown RBP eCLIP5.58□□□□□ -1.52
SKP1-209ENST00000522552 PPP1R18Q6NYC8 613 aa5.58□□□□□ -1.52
SKP1-209ENST00000522552 SEPT3Q9UH03 358 aa5.58□□□□□ -1.52
SKP1-209ENST00000522552 DMGDHQ9UI17 866 aaKnown RBP5.58□□□□□ -1.52
SKP1-209ENST00000522552 DKK1O94907 266 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 FMNL1O95466 1100 aaPredicted RBP5.57□□□□□ -1.52
SKP1-209ENST00000522552 SLC4A3P48751 1232 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 XPCQ01831 940 aaPredicted RBP5.57□□□□□ -1.52
SKP1-209ENST00000522552 GNL2Q13823 731 aaKnown RBP5.57□□□□□ -1.52
SKP1-209ENST00000522552 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 PLPP7Q8NBV4 271 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 BRINP2Q9C0B6 783 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 MRS2Q9HD23 443 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 PARP2Q9UGN5 583 aa5.57□□□□□ -1.52
SKP1-209ENST00000522552 PEX14O75381 377 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 APLP1P51693 650 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 SF3B2Q13435 895 aaKnown RBP5.56□□□□□ -1.52
SKP1-209ENST00000522552 SLFNL1Q499Z3 407 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 DNAAF2Q9NVR5 837 aaKnown RBP5.56□□□□□ -1.52
SKP1-209ENST00000522552 SLC10A3P09131 477 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 HSD3B2P26439 372 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 ZNF76P36508 570 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.52
SKP1-209ENST00000522552 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms