RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 KRT28Q7Z3Y7 464 aa19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 ABCF2Q9UG63 623 aa19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 NAIPQ13075 1403 aa19.27■□□□□ 0.67
PCDHA3-201ENST00000522353 BLOC1S2Q6QNY1 142 aa19.27■□□□□ 0.67
PCDHA3-201ENST00000522353 CCDC85AQ96PX6 553 aaPredicted RBP19.27■□□□□ 0.67
PCDHA3-201ENST00000522353 SETQ01105 290 aaPredicted RBP19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 NME9Q86XW9 330 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 STK11IPQ8N1F8 1099 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 CDR1P51861 262 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 SYCP1Q15431 976 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 CUL7Q14999 1698 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 ABCC11Q96J66 1382 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 MCM10Q7L590 875 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 MRE11P49959 708 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 PDILTQ8N807 584 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 FANCAO15360 1455 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 PAF1Q8N7H5 531 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 STIM1Q13586 685 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 MNS1Q8NEH6 495 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 KIF1BPQ96EK5 621 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 NFKBIBQ15653 356 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 ARGLU1Q9NWB6 273 aaPredicted RBP19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 BMP2KQ9NSY1 1161 aaPredicted RBP19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 TOM1O60784 492 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 TEX35Q5T0J7 233 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 HSP90AB2PQ58FF8 381 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 ACBD3Q9H3P7 528 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 ANKIB1Q9P2G1 1089 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 IMMTQ16891 758 aaKnown RBP19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 WASF1Q92558 559 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 USHBP1Q8N6Y0 703 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 RUFY1Q96T51 708 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 RAB11FIP3O75154 756 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 FAM43AQ8N2R8 423 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 CCDC39Q9UFE4 941 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 ABCC5O15440 1437 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 FIBPO43427 364 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 IFNL2Q8IZJ0 200 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 ZSCAN31Q96LW9 406 aaPredicted RBP19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 MAP4K4O95819 1239 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 MYD88Q99836 296 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 HYPKQ9NX55 129 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 TNRQ92752 1358 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 STK3Q13188 491 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 CRACR2BQ8N4Y2 399 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 MSH6P52701 1360 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 NASPP49321 788 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 ZHX3Q9H4I2 956 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 DACH1Q9UI36 760 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 PDIA4P13667 645 aaKnown RBP19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 ZNF76P36508 570 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 USP5P45974 858 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 SLF2Q8IX21 1173 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 PDCL3Q9H2J4 239 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 TRIM5Q9C035 493 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 EMILIN1Q9Y6C2 1016 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 POLR3DP05423 398 aaPredicted RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 KRT85P78386 507 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 AK7Q96M32 723 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 THUMPD2Q9BTF0 503 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 DZIP1Q86YF9 867 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 ME1P48163 572 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 LARP1BQ659C4 914 aaKnown RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 MYO6Q9UM54 1294 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 TRAK2O60296 914 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 MAP3K12Q12852 859 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 ZNHIT6Q9NWK9 470 aaKnown RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 SLC5A1P13866 664 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 SLFN5Q08AF3 891 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 LUC7LQ9NQ29 371 aaKnown RBP19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 PDRG1Q9NUG6 133 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 TEX14Q8IWB6 1497 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms