RNA–Protein interactions for RNA: ENST00000522133.1

IKBKB-222, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 5

Gene IKBKB, Length 576 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-222	ENST00000522133	RGPD4	Q7Z3J3	1758 aa		13.32	□□□□□ -0.28
IKBKB-222	ENST00000522133	SBF2	Q86WG5	1849 aa		13.32	□□□□□ -0.28
IKBKB-222	ENST00000522133	TNNT2	P45379	298 aa	Predicted RBP	13.32	□□□□□ -0.28
IKBKB-222	ENST00000522133	NME9	Q86XW9	330 aa		13.32	□□□□□ -0.28
IKBKB-222	ENST00000522133	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.32	□□□□□ -0.28
IKBKB-222	ENST00000522133	ERBB3	P21860	1342 aa		13.32	□□□□□ -0.28
IKBKB-222	ENST00000522133	ANKRD24	Q8TF21	1146 aa		13.31	□□□□□ -0.28
IKBKB-222	ENST00000522133	KAT6B	Q8WYB5	2073 aa		13.31	□□□□□ -0.28
IKBKB-222	ENST00000522133	MAP2	P11137	1827 aa	Known RBP	13.31	□□□□□ -0.28
IKBKB-222	ENST00000522133	USP31	Q70CQ4	1352 aa		13.31	□□□□□ -0.28
IKBKB-222	ENST00000522133	PNISR	Q8TF01	805 aa	Known RBP	13.3	□□□□□ -0.28
IKBKB-222	ENST00000522133	COG3	Q96JB2	828 aa		13.3	□□□□□ -0.28
IKBKB-222	ENST00000522133	ARX	Q96QS3	562 aa		13.3	□□□□□ -0.28
IKBKB-222	ENST00000522133	TNS2	Q63HR2	1409 aa		13.3	□□□□□ -0.28
IKBKB-222	ENST00000522133	USP54	Q70EL1	1684 aa		13.29	□□□□□ -0.28
IKBKB-222	ENST00000522133	CENPB	P07199	599 aa	Predicted RBP	13.29	□□□□□ -0.28
IKBKB-222	ENST00000522133	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.28	□□□□□ -0.28
IKBKB-222	ENST00000522133	DDX54	Q8TDD1	881 aa	Known RBP	13.28	□□□□□ -0.28
IKBKB-222	ENST00000522133	NFAT5	O94916	1531 aa		13.28	□□□□□ -0.28
IKBKB-222	ENST00000522133	RGPD5	Q99666	1765 aa		13.27	□□□□□ -0.28
IKBKB-222	ENST00000522133	MTHFS	P49914	203 aa		13.27	□□□□□ -0.29
IKBKB-222	ENST00000522133	LTV1	Q96GA3	475 aa	Predicted RBP	13.27	□□□□□ -0.29
IKBKB-222	ENST00000522133	CFAP53	Q96M91	514 aa		13.27	□□□□□ -0.29
IKBKB-222	ENST00000522133	ABCC6	O95255	1503 aa		13.27	□□□□□ -0.29
IKBKB-222	ENST00000522133	WDR43	Q15061	677 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	GPR162	Q16538	588 aa		13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	SLC27A3	Q5K4L6	730 aa		13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	CASZ1	Q86V15	1759 aa		13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	SLC16A10	Q8TF71	515 aa		13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	IP6K1	Q92551	441 aa		13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	SYTL4	Q96C24	671 aa	Predicted RBP	13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	SGIP1	Q9BQI5	828 aa		13.26	□□□□□ -0.29
IKBKB-222	ENST00000522133	POLD1	P28340	1107 aa		13.25	□□□□□ -0.29
IKBKB-222	ENST00000522133	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
IKBKB-222	ENST00000522133	KLHL34	Q8N239	644 aa		13.25	□□□□□ -0.29
IKBKB-222	ENST00000522133	AMPH	P49418	695 aa		13.24	□□□□□ -0.29
IKBKB-222	ENST00000522133	LRRC4B	Q9NT99	713 aa		13.24	□□□□□ -0.29
IKBKB-222	ENST00000522133	TFCP2L1	Q9NZI6	479 aa		13.24	□□□□□ -0.29
IKBKB-222	ENST00000522133	WNK3	Q9BYP7	1800 aa		13.24	□□□□□ -0.29
IKBKB-222	ENST00000522133	PRIM1	P49642	420 aa	Known RBP	13.23	□□□□□ -0.29
IKBKB-222	ENST00000522133	ZNF827	Q17R98	1081 aa		13.23	□□□□□ -0.29
IKBKB-222	ENST00000522133	SMG6	Q86US8	1419 aa	Known RBP	13.22	□□□□□ -0.29
IKBKB-222	ENST00000522133	INSR	P06213	1382 aa		13.22	□□□□□ -0.29
IKBKB-222	ENST00000522133	PELP1	Q8IZL8	1130 aa	Known RBP	13.21	□□□□□ -0.29
IKBKB-222	ENST00000522133	ZCRB1	Q8TBF4	217 aa	Known RBP	13.21	□□□□□ -0.29
IKBKB-222	ENST00000522133	AKT1S1	Q96B36	256 aa		13.21	□□□□□ -0.29
IKBKB-222	ENST00000522133	COL3A1	P02461	1466 aa	Predicted RBP	13.21	□□□□□ -0.3
IKBKB-222	ENST00000522133	NHS	Q6T4R5	1651 aa		13.21	□□□□□ -0.3
IKBKB-222	ENST00000522133	MAP3K5	Q99683	1374 aa		13.2	□□□□□ -0.3
IKBKB-222	ENST00000522133	LTN1	O94822	1766 aa		13.2	□□□□□ -0.3
IKBKB-222	ENST00000522133	PPM1G	O15355	546 aa	Predicted RBP	13.2	□□□□□ -0.3
IKBKB-222	ENST00000522133	MSH5	O43196	834 aa		13.2	□□□□□ -0.3
IKBKB-222	ENST00000522133	POLK	Q9UBT6	870 aa		13.2	□□□□□ -0.3
IKBKB-222	ENST00000522133	ADAMTS8	Q9UP79	889 aa		13.2	□□□□□ -0.3
IKBKB-222	ENST00000522133	FBLN1	P23142	703 aa		13.19	□□□□□ -0.3
IKBKB-222	ENST00000522133	HMGB2	P26583	209 aa	Known RBP	13.19	□□□□□ -0.3
IKBKB-222	ENST00000522133	HOXC9	P31274	260 aa		13.19	□□□□□ -0.3
IKBKB-222	ENST00000522133	KCNQ4	P56696	695 aa		13.19	□□□□□ -0.3
IKBKB-222	ENST00000522133	NUDC	Q9Y266	331 aa		13.19	□□□□□ -0.3
IKBKB-222	ENST00000522133	EMILIN1	Q9Y6C2	1016 aa		13.19	□□□□□ -0.3
IKBKB-222	ENST00000522133	MAP3K19	Q56UN5	1328 aa		13.18	□□□□□ -0.3
IKBKB-222	ENST00000522133	SENP3-EIF4A1	A0A087X0R7	540 aa		13.18	□□□□□ -0.3
IKBKB-222	ENST00000522133	DIAPH1	O60610	1272 aa	Known RBP	13.18	□□□□□ -0.3
IKBKB-222	ENST00000522133	C1QTNF8	P60827	252 aa		13.18	□□□□□ -0.3
IKBKB-222	ENST00000522133	RRS1	Q15050	365 aa	Known RBP	13.18	□□□□□ -0.3
IKBKB-222	ENST00000522133	CCNL1	Q9UK58	526 aa	Predicted RBP	13.18	□□□□□ -0.3
IKBKB-222	ENST00000522133	ZBED9	Q6R2W3	1325 aa		13.17	□□□□□ -0.3
IKBKB-222	ENST00000522133	PNPLA7	Q6ZV29	1317 aa		13.17	□□□□□ -0.3
IKBKB-222	ENST00000522133	RAPGEF4	Q8WZA2	1011 aa		13.17	□□□□□ -0.3
IKBKB-222	ENST00000522133	BTAF1	O14981	1849 aa		13.17	□□□□□ -0.3
IKBKB-222	ENST00000522133	GRIN3B	O60391	1043 aa		13.15	□□□□□ -0.3
IKBKB-222	ENST00000522133	PAPPA	Q13219	1627 aa		13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	CHD4	Q14839	1912 aa		13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	U2SURP	O15042	1029 aa	Known RBP	13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	GIGYF1	O75420	1035 aa	Predicted RBP	13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	TAT	P17735	454 aa	Predicted RBP	13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	FLT4	P35916	1363 aa		13.14	□□□□□ -0.31
IKBKB-222	ENST00000522133	KIF24	Q5T7B8	1368 aa		13.13	□□□□□ -0.31
IKBKB-222	ENST00000522133	NBPF6	Q5VWK0	638 aa		13.13	□□□□□ -0.31
IKBKB-222	ENST00000522133	CCDC146	Q8IYE0	955 aa		13.13	□□□□□ -0.31
IKBKB-222	ENST00000522133	NBPF4	Q96M43	638 aa		13.13	□□□□□ -0.31
IKBKB-222	ENST00000522133	UTRN	P46939	3433 aa		13.12	□□□□□ -0.31
IKBKB-222	ENST00000522133	RTL1	A6NKG5	1358 aa		13.12	□□□□□ -0.31
IKBKB-222	ENST00000522133	COL23A1	Q86Y22	540 aa	Predicted RBP	13.12	□□□□□ -0.31
IKBKB-222	ENST00000522133	FLAD1	Q8NFF5	587 aa		13.12	□□□□□ -0.31
IKBKB-222	ENST00000522133	NLGN2	Q8NFZ4	835 aa		13.12	□□□□□ -0.31
IKBKB-222	ENST00000522133	IL13	P35225	146 aa		13.11	□□□□□ -0.31
IKBKB-222	ENST00000522133	USHBP1	Q8N6Y0	703 aa		13.11	□□□□□ -0.31
IKBKB-222	ENST00000522133	RUNDC1	Q96C34	613 aa		13.11	□□□□□ -0.31
IKBKB-222	ENST00000522133	PNN	Q9H307	717 aa	Known RBP	13.11	□□□□□ -0.31
IKBKB-222	ENST00000522133	MSL1	Q68DK7	614 aa		13.1	□□□□□ -0.31
IKBKB-222	ENST00000522133	MPRIP	Q6WCQ1	1025 aa		13.1	□□□□□ -0.31
IKBKB-222	ENST00000522133	SALL2	Q9Y467	1007 aa	Predicted RBP	13.1	□□□□□ -0.31
IKBKB-222	ENST00000522133	PCDH11X	Q9BZA7	1347 aa		13.1	□□□□□ -0.31
IKBKB-222	ENST00000522133	PCDH11Y	Q9BZA8	1340 aa		13.1	□□□□□ -0.31
IKBKB-222	ENST00000522133	FAM208A	Q9UK61	1670 aa	Known RBP	13.09	□□□□□ -0.31
IKBKB-222	ENST00000522133	HSP90AB2P	Q58FF8	381 aa		13.09	□□□□□ -0.31
IKBKB-222	ENST00000522133	SMARCC1	Q92922	1105 aa	Predicted RBP	13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms