RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SBF2Q86WG5 1849 aa28.11■■■□□ 2.09
TRIM35-203ENST00000521253 PARD3Q8TEW0 1356 aa28.1■■■□□ 2.09
TRIM35-203ENST00000521253 KCNQ2O43526 872 aa28.09■■■□□ 2.09
TRIM35-203ENST00000521253 CNGB1Q14028 1251 aaPredicted RBP28.09■■■□□ 2.09
TRIM35-203ENST00000521253 ACSBG1Q96GR2 724 aa28.09■■■□□ 2.09
TRIM35-203ENST00000521253 IGSF1Q8N6C5 1336 aa28.04■■■□□ 2.08
TRIM35-203ENST00000521253 PLSCR1O15162 318 aa28.04■■■□□ 2.08
TRIM35-203ENST00000521253 MTHFSP49914 203 aa28.04■■■□□ 2.08
TRIM35-203ENST00000521253 SHANK3Q9BYB0 1731 aa28.04■■■□□ 2.08
TRIM35-203ENST00000521253 SRCAPQ6ZRS2 3230 aa28.02■■■□□ 2.08
TRIM35-203ENST00000521253 NHSQ6T4R5 1651 aa28.02■■■□□ 2.08
TRIM35-203ENST00000521253 PCDH11XQ9BZA7 1347 aa28.01■■■□□ 2.07
TRIM35-203ENST00000521253 PCDH11YQ9BZA8 1340 aa28.01■■■□□ 2.07
TRIM35-203ENST00000521253 IL13P35225 146 aa27.99■■■□□ 2.07
TRIM35-203ENST00000521253 RREB1Q92766 1687 aa27.98■■■□□ 2.07
TRIM35-203ENST00000521253 CYP27B1O15528 508 aa27.98■■■□□ 2.07
TRIM35-203ENST00000521253 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
TRIM35-203ENST00000521253 SPG7Q9UQ90 795 aa27.97■■■□□ 2.07
TRIM35-203ENST00000521253 PSDA5PKW4 1024 aaPredicted RBP27.96■■■□□ 2.07
TRIM35-203ENST00000521253 PRIM1P49642 420 aaKnown RBP27.96■■■□□ 2.07
TRIM35-203ENST00000521253 PROM2Q8N271 834 aa27.96■■■□□ 2.07
TRIM35-203ENST00000521253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.96■■■□□ 2.07
TRIM35-203ENST00000521253 RGPD3A6NKT7 1758 aaPredicted RBP27.96■■■□□ 2.07
TRIM35-203ENST00000521253 RGPD4Q7Z3J3 1758 aa27.96■■■□□ 2.07
TRIM35-203ENST00000521253 AEBP1Q8IUX7 1158 aa27.95■■■□□ 2.06
TRIM35-203ENST00000521253 SYTL4Q96C24 671 aaPredicted RBP27.95■■■□□ 2.06
TRIM35-203ENST00000521253 PKD1L3Q7Z443 1732 aa27.95■■■□□ 2.06
TRIM35-203ENST00000521253 NUP188Q5SRE5 1749 aa27.94■■■□□ 2.06
TRIM35-203ENST00000521253 R3HDM1Q15032 1099 aaKnown RBP27.93■■■□□ 2.06
TRIM35-203ENST00000521253 PLEKHG2Q9H7P9 1386 aa27.92■■■□□ 2.06
TRIM35-203ENST00000521253 TXNRD1Q16881 649 aa27.92■■■□□ 2.06
TRIM35-203ENST00000521253 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
TRIM35-203ENST00000521253 DOT1LQ8TEK3 1739 aa27.92■■■□□ 2.06
TRIM35-203ENST00000521253 KAT6BQ8WYB5 2073 aa27.91■■■□□ 2.06
TRIM35-203ENST00000521253 BTAF1O14981 1849 aa27.9■■■□□ 2.06
TRIM35-203ENST00000521253 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
TRIM35-203ENST00000521253 NBPF14Q5TI25 921 aa27.9■■■□□ 2.06
TRIM35-203ENST00000521253 KDRP35968 1356 aa27.89■■■□□ 2.06
TRIM35-203ENST00000521253 NKX1-1Q15270 411 aaPredicted RBP27.89■■■□□ 2.06
TRIM35-203ENST00000521253 COL3A1P02461 1466 aaPredicted RBP27.88■■■□□ 2.05
TRIM35-203ENST00000521253 PHKG2P15735 406 aa27.87■■■□□ 2.05
TRIM35-203ENST00000521253 IFNL2Q8IZJ0 200 aa27.87■■■□□ 2.05
TRIM35-203ENST00000521253 PPP2R1AP30153 589 aa27.86■■■□□ 2.05
TRIM35-203ENST00000521253 PLEKHO1Q53GL0 409 aaPredicted RBP27.86■■■□□ 2.05
TRIM35-203ENST00000521253 ANO8Q9HCE9 1232 aaPredicted RBP27.85■■■□□ 2.05
TRIM35-203ENST00000521253 DDX10Q13206 875 aaKnown RBP27.84■■■□□ 2.05
TRIM35-203ENST00000521253 HMOX1P09601 288 aa27.83■■■□□ 2.05
TRIM35-203ENST00000521253 AMOTQ4VCS5 1084 aa27.83■■■□□ 2.05
TRIM35-203ENST00000521253 MPRIPQ6WCQ1 1025 aa27.82■■■□□ 2.04
TRIM35-203ENST00000521253 TOGARAM1Q9Y4F4 1720 aa27.81■■■□□ 2.04
TRIM35-203ENST00000521253 ZNF530Q6P9A1 599 aaPredicted RBP27.81■■■□□ 2.04
TRIM35-203ENST00000521253 CFAP53Q96M91 514 aa27.8■■■□□ 2.04
TRIM35-203ENST00000521253 LRRC4BQ9NT99 713 aa27.8■■■□□ 2.04
TRIM35-203ENST00000521253 U2SURPO15042 1029 aaKnown RBP27.79■■■□□ 2.04
TRIM35-203ENST00000521253 SLC27A3Q5K4L6 730 aa27.77■■■□□ 2.04
TRIM35-203ENST00000521253 PIGBQ92521 554 aa27.77■■■□□ 2.04
TRIM35-203ENST00000521253 STK32BQ9NY57 414 aa27.77■■■□□ 2.04
TRIM35-203ENST00000521253 HSP90AB1P08238 724 aaKnown RBP27.76■■■□□ 2.03
TRIM35-203ENST00000521253 KCNQ4P56696 695 aa27.75■■■□□ 2.03
TRIM35-203ENST00000521253 SLC15A2Q16348 729 aa27.75■■■□□ 2.03
TRIM35-203ENST00000521253 C1orf141Q5JVX7 400 aa27.75■■■□□ 2.03
TRIM35-203ENST00000521253 DCAF5Q96JK2 942 aa27.75■■■□□ 2.03
TRIM35-203ENST00000521253 TMOD3Q9NYL9 352 aa27.74■■■□□ 2.03
TRIM35-203ENST00000521253 PAPPAQ13219 1627 aa27.74■■■□□ 2.03
TRIM35-203ENST00000521253 CCNL1Q9UK58 526 aaPredicted RBP27.73■■■□□ 2.03
TRIM35-203ENST00000521253 KDM6AO15550 1401 aaPredicted RBP27.73■■■□□ 2.03
TRIM35-203ENST00000521253 PALLDQ8WX93 1383 aa27.73■■■□□ 2.03
TRIM35-203ENST00000521253 ITGB4P16144 1822 aa27.71■■■□□ 2.03
TRIM35-203ENST00000521253 ERVV-2B6SEH9 535 aa27.71■■■□□ 2.03
TRIM35-203ENST00000521253 LY75O60449 1722 aa27.71■■■□□ 2.03
TRIM35-203ENST00000521253 ZNF827Q17R98 1081 aa27.71■■■□□ 2.03
TRIM35-203ENST00000521253 SMARCC1Q92922 1105 aaPredicted RBP27.7■■■□□ 2.02
TRIM35-203ENST00000521253 NUDCQ9Y266 331 aa27.7■■■□□ 2.02
TRIM35-203ENST00000521253 MTHFSDQ2M296 383 aaKnown RBP27.69■■■□□ 2.02
TRIM35-203ENST00000521253 AKAP4Q5JQC9 854 aa27.69■■■□□ 2.02
TRIM35-203ENST00000521253 PDGFDQ9GZP0 370 aaPredicted RBP27.69■■■□□ 2.02
TRIM35-203ENST00000521253 RALBP1Q15311 655 aa27.68■■■□□ 2.02
TRIM35-203ENST00000521253 ASAP1Q9ULH1 1129 aa27.68■■■□□ 2.02
TRIM35-203ENST00000521253 AKT1S1Q96B36 256 aa27.67■■■□□ 2.02
TRIM35-203ENST00000521253 LRP5O75197 1615 aa27.67■■■□□ 2.02
TRIM35-203ENST00000521253 U2AF1L5P0DN76 240 aaPredicted RBP27.65■■■□□ 2.02
TRIM35-203ENST00000521253 CABP4P57796 275 aa27.65■■■□□ 2.02
TRIM35-203ENST00000521253 U2AF1Q01081 240 aaKnown RBP eCLIP27.65■■■□□ 2.02
TRIM35-203ENST00000521253 RSPH6AQ9H0K4 717 aa27.65■■■□□ 2.02
TRIM35-203ENST00000521253 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
TRIM35-203ENST00000521253 PRKAR2BP31323 418 aa27.63■■■□□ 2.01
TRIM35-203ENST00000521253 LGR6Q9HBX8 967 aa27.62■■■□□ 2.01
TRIM35-203ENST00000521253 CASZ1Q86V15 1759 aa27.62■■■□□ 2.01
TRIM35-203ENST00000521253 LOC102724428A0A0B4J2F2 783 aa27.61■■■□□ 2.01
TRIM35-203ENST00000521253 SIK1P57059 783 aa27.61■■■□□ 2.01
TRIM35-203ENST00000521253 NFATC2IPQ8NCF5 419 aa27.61■■■□□ 2.01
TRIM35-203ENST00000521253 PHACTR3Q96KR7 559 aa27.61■■■□□ 2.01
TRIM35-203ENST00000521253 GAS2L2Q8NHY3 880 aa27.6■■■□□ 2.01
TRIM35-203ENST00000521253 TFCP2L1Q9NZI6 479 aa27.6■■■□□ 2.01
TRIM35-203ENST00000521253 RNMTO43148 476 aaKnown RBP27.59■■■□□ 2.01
TRIM35-203ENST00000521253 FCHSD2O94868 740 aa27.59■■■□□ 2.01
TRIM35-203ENST00000521253 ZBTB7AO95365 584 aa27.59■■■□□ 2.01
TRIM35-203ENST00000521253 SPON1Q9HCB6 807 aa27.59■■■□□ 2.01
TRIM35-203ENST00000521253 PNPLA7Q6ZV29 1317 aa27.57■■■□□ 2
TRIM35-203ENST00000521253 ZNF316A6NFI3 1004 aaPredicted RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 1332.5 ms