RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LRP5O75197 1615 aa23.47■■□□□ 1.35
SQLE-205ENST00000521232 ANKRD26Q9UPS8 1709 aa23.45■■□□□ 1.34
SQLE-205ENST00000521232 PPM1GO15355 546 aaPredicted RBP23.45■■□□□ 1.34
SQLE-205ENST00000521232 TXNRD1Q16881 649 aa23.45■■□□□ 1.34
SQLE-205ENST00000521232 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
SQLE-205ENST00000521232 SHANK3Q9BYB0 1731 aa23.42■■□□□ 1.34
SQLE-205ENST00000521232 NSD2O96028 1365 aa23.42■■□□□ 1.34
SQLE-205ENST00000521232 KIF7Q2M1P5 1343 aa23.42■■□□□ 1.34
SQLE-205ENST00000521232 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
SQLE-205ENST00000521232 BTAF1O14981 1849 aa23.4■■□□□ 1.34
SQLE-205ENST00000521232 TNNT2P45379 298 aaPredicted RBP23.4■■□□□ 1.34
SQLE-205ENST00000521232 ANO8Q9HCE9 1232 aaPredicted RBP23.4■■□□□ 1.34
SQLE-205ENST00000521232 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
SQLE-205ENST00000521232 NCAPD2Q15021 1401 aa23.39■■□□□ 1.33
SQLE-205ENST00000521232 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
SQLE-205ENST00000521232 EYA1Q99502 592 aa23.38■■□□□ 1.33
SQLE-205ENST00000521232 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
SQLE-205ENST00000521232 PCDH11XQ9BZA7 1347 aa23.34■■□□□ 1.33
SQLE-205ENST00000521232 PCDH11YQ9BZA8 1340 aa23.34■■□□□ 1.33
SQLE-205ENST00000521232 EIF4A2Q14240 407 aaKnown RBP23.34■■□□□ 1.33
SQLE-205ENST00000521232 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
SQLE-205ENST00000521232 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
SQLE-205ENST00000521232 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
SQLE-205ENST00000521232 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
SQLE-205ENST00000521232 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.33
SQLE-205ENST00000521232 CYP27B1O15528 508 aa23.32■■□□□ 1.32
SQLE-205ENST00000521232 PER1O15534 1290 aaPredicted RBP23.32■■□□□ 1.32
SQLE-205ENST00000521232 SLC27A3Q5K4L6 730 aa23.31■■□□□ 1.32
SQLE-205ENST00000521232 LRRC4BQ9NT99 713 aa23.31■■□□□ 1.32
SQLE-205ENST00000521232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.31■■□□□ 1.325e-8■□□□□ 9.1
SQLE-205ENST00000521232 SPON1Q9HCB6 807 aa23.3■■□□□ 1.32
SQLE-205ENST00000521232 PKD1L3Q7Z443 1732 aa23.3■■□□□ 1.32
SQLE-205ENST00000521232 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
SQLE-205ENST00000521232 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
SQLE-205ENST00000521232 CASZ1Q86V15 1759 aa23.29■■□□□ 1.32
SQLE-205ENST00000521232 NKX1-1Q15270 411 aaPredicted RBP23.28■■□□□ 1.32
SQLE-205ENST00000521232 PAPPAQ13219 1627 aa23.28■■□□□ 1.32
SQLE-205ENST00000521232 IGSF1Q8N6C5 1336 aa23.27■■□□□ 1.32
SQLE-205ENST00000521232 LY75O60449 1722 aa23.25■■□□□ 1.31
SQLE-205ENST00000521232 PLEKHG2Q9H7P9 1386 aa23.25■■□□□ 1.31
SQLE-205ENST00000521232 AKT1S1Q96B36 256 aa23.24■■□□□ 1.31
SQLE-205ENST00000521232 ZNF827Q17R98 1081 aa23.23■■□□□ 1.31
SQLE-205ENST00000521232 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
SQLE-205ENST00000521232 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
SQLE-205ENST00000521232 ZBTB7AO95365 584 aa23.21■■□□□ 1.31
SQLE-205ENST00000521232 PHKG2P15735 406 aa23.21■■□□□ 1.31
SQLE-205ENST00000521232 KCNQ4P56696 695 aa23.21■■□□□ 1.31
SQLE-205ENST00000521232 ITGB4P16144 1822 aa23.21■■□□□ 1.31
SQLE-205ENST00000521232 TOGARAM1Q9Y4F4 1720 aa23.2■■□□□ 1.3
SQLE-205ENST00000521232 IL13P35225 146 aa23.2■■□□□ 1.3
SQLE-205ENST00000521232 CCNL1Q9UK58 526 aaPredicted RBP23.2■■□□□ 1.3
SQLE-205ENST00000521232 NPC1L1Q9UHC9 1359 aa23.19■■□□□ 1.3
SQLE-205ENST00000521232 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
SQLE-205ENST00000521232 MTHFSP49914 203 aa23.18■■□□□ 1.3
SQLE-205ENST00000521232 PIGBQ92521 554 aa23.18■■□□□ 1.3
SQLE-205ENST00000521232 MTFR1LQ9H019 292 aa23.18■■□□□ 1.3
SQLE-205ENST00000521232 PPP1R1BQ9UD71 204 aaPredicted RBP23.18■■□□□ 1.3
SQLE-205ENST00000521232 ATF5Q9Y2D1 282 aaPredicted RBP23.18■■□□□ 1.3
SQLE-205ENST00000521232 PTGER2P43116 358 aa23.17■■□□□ 1.3
SQLE-205ENST00000521232 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
SQLE-205ENST00000521232 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
SQLE-205ENST00000521232 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
SQLE-205ENST00000521232 QSER1Q2KHR3 1735 aa23.16■■□□□ 1.3
SQLE-205ENST00000521232 HMGB2P26583 209 aaKnown RBP23.15■■□□□ 1.3
SQLE-205ENST00000521232 SULT6B1Q6IMI4 303 aa23.15■■□□□ 1.3
SQLE-205ENST00000521232 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
SQLE-205ENST00000521232 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
SQLE-205ENST00000521232 SGIP1Q9BQI5 828 aa23.14■■□□□ 1.29
SQLE-205ENST00000521232 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
SQLE-205ENST00000521232 KDRP35968 1356 aa23.14■■□□□ 1.29
SQLE-205ENST00000521232 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
SQLE-205ENST00000521232 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
SQLE-205ENST00000521232 HSP90AB1P08238 724 aaKnown RBP23.12■■□□□ 1.29
SQLE-205ENST00000521232 TMOD3Q9NYL9 352 aa23.12■■□□□ 1.29
SQLE-205ENST00000521232 TUBGCP6Q96RT7 1819 aa23.1■■□□□ 1.29
SQLE-205ENST00000521232 ERVV-2B6SEH9 535 aa23.1■■□□□ 1.29
SQLE-205ENST00000521232 DCAF5Q96JK2 942 aa23.1■■□□□ 1.29
SQLE-205ENST00000521232 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
SQLE-205ENST00000521232 TAF1LQ8IZX4 1826 aa23.09■■□□□ 1.29
SQLE-205ENST00000521232 DIAPH1O60610 1272 aaKnown RBP23.08■■□□□ 1.29
SQLE-205ENST00000521232 ASAP1Q9ULH1 1129 aa23.08■■□□□ 1.29
SQLE-205ENST00000521232 C5P01031 1676 aa23.08■■□□□ 1.29
SQLE-205ENST00000521232 ATG3Q9NT62 314 aa23.07■■□□□ 1.28
SQLE-205ENST00000521232 LOC102724428A0A0B4J2F2 783 aa23.06■■□□□ 1.28
SQLE-205ENST00000521232 SIK1P57059 783 aa23.06■■□□□ 1.28
SQLE-205ENST00000521232 CNGB1Q14028 1251 aaPredicted RBP23.06■■□□□ 1.28
SQLE-205ENST00000521232 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
SQLE-205ENST00000521232 COL23A1Q86Y22 540 aaPredicted RBP23.05■■□□□ 1.28
SQLE-205ENST00000521232 ARXQ96QS3 562 aa23.05■■□□□ 1.28
SQLE-205ENST00000521232 KDM6AO15550 1401 aaPredicted RBP23.04■■□□□ 1.28
SQLE-205ENST00000521232 COL24A1Q17RW2 1714 aa23.04■■□□□ 1.28
SQLE-205ENST00000521232 HMOX1P09601 288 aa23.03■■□□□ 1.28
SQLE-205ENST00000521232 FLAD1Q8NFF5 587 aa23.03■■□□□ 1.28
SQLE-205ENST00000521232 SYT17Q9BSW7 474 aa23.02■■□□□ 1.28
SQLE-205ENST00000521232 FHDC1Q9C0D6 1143 aaPredicted RBP23.02■■□□□ 1.28
SQLE-205ENST00000521232 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
SQLE-205ENST00000521232 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
SQLE-205ENST00000521232 CABP4P57796 275 aa23.01■■□□□ 1.27
SQLE-205ENST00000521232 AKAP4Q5JQC9 854 aa23.01■■□□□ 1.27
SQLE-205ENST00000521232 MSH5O43196 834 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms