RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 NHSQ6T4R5 1651 aa28.15■■■□□ 2.1
MCM4-211ENST00000520994 IGSF1Q8N6C5 1336 aa28.15■■■□□ 2.1
MCM4-211ENST00000520994 PKD1L3Q7Z443 1732 aa28.15■■■□□ 2.1
MCM4-211ENST00000520994 USHBP1Q8N6Y0 703 aa28.14■■■□□ 2.1
MCM4-211ENST00000520994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.14■■■□□ 2.1
MCM4-211ENST00000520994 PLSCR1O15162 318 aa28.13■■■□□ 2.09
MCM4-211ENST00000520994 APBA3O96018 575 aa28.13■■■□□ 2.09
MCM4-211ENST00000520994 CAMKK2Q96RR4 588 aa28.13■■■□□ 2.09
MCM4-211ENST00000520994 EN1Q05925 392 aaPredicted RBP28.11■■■□□ 2.09
MCM4-211ENST00000520994 MTHFSP49914 203 aa28.1■■■□□ 2.09
MCM4-211ENST00000520994 RREB1Q92766 1687 aa28.1■■■□□ 2.09
MCM4-211ENST00000520994 PCDH11XQ9BZA7 1347 aa28.09■■■□□ 2.09
MCM4-211ENST00000520994 PCDH11YQ9BZA8 1340 aa28.09■■■□□ 2.09
MCM4-211ENST00000520994 IL13P35225 146 aa28.07■■■□□ 2.08
MCM4-211ENST00000520994 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
MCM4-211ENST00000520994 KDRP35968 1356 aa28.06■■■□□ 2.08
MCM4-211ENST00000520994 EZH2Q15910 746 aaKnown RBP28.05■■■□□ 2.08
MCM4-211ENST00000520994 KAT6BQ8WYB5 2073 aa28.05■■■□□ 2.08
MCM4-211ENST00000520994 SPG7Q9UQ90 795 aa28.05■■■□□ 2.08
MCM4-211ENST00000520994 NKX1-1Q15270 411 aaPredicted RBP28.02■■■□□ 2.08
MCM4-211ENST00000520994 BTAF1O14981 1849 aa28.01■■■□□ 2.07
MCM4-211ENST00000520994 COL3A1P02461 1466 aaPredicted RBP28.01■■■□□ 2.07
MCM4-211ENST00000520994 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
MCM4-211ENST00000520994 CYP27B1O15528 508 aa28■■■□□ 2.07
MCM4-211ENST00000520994 KCNQ2O43526 872 aa28■■■□□ 2.07
MCM4-211ENST00000520994 PTF1AQ7RTS3 328 aa28■■■□□ 2.07
MCM4-211ENST00000520994 NUP188Q5SRE5 1749 aa28■■■□□ 2.07
MCM4-211ENST00000520994 DIAPH1O60610 1272 aaKnown RBP27.99■■■□□ 2.07
MCM4-211ENST00000520994 AMOTQ4VCS5 1084 aa27.98■■■□□ 2.07
MCM4-211ENST00000520994 ACSBG1Q96GR2 724 aa27.98■■■□□ 2.07
MCM4-211ENST00000520994 IFNL2Q8IZJ0 200 aa27.96■■■□□ 2.07
MCM4-211ENST00000520994 PPP2R1AP30153 589 aa27.95■■■□□ 2.06
MCM4-211ENST00000520994 PLEKHO1Q53GL0 409 aaPredicted RBP27.95■■■□□ 2.06
MCM4-211ENST00000520994 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
MCM4-211ENST00000520994 CFAP53Q96M91 514 aa27.94■■■□□ 2.06
MCM4-211ENST00000520994 PRIM1P49642 420 aaKnown RBP27.93■■■□□ 2.06
MCM4-211ENST00000520994 PROM2Q8N271 834 aa27.93■■■□□ 2.06
MCM4-211ENST00000520994 PHKG2P15735 406 aa27.92■■■□□ 2.06
MCM4-211ENST00000520994 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
MCM4-211ENST00000520994 TXNRD1Q16881 649 aa27.91■■■□□ 2.06
MCM4-211ENST00000520994 NBPF14Q5TI25 921 aa27.91■■■□□ 2.06
MCM4-211ENST00000520994 AEBP1Q8IUX7 1158 aa27.91■■■□□ 2.06
MCM4-211ENST00000520994 ITGB4P16144 1822 aa27.9■■■□□ 2.06
MCM4-211ENST00000520994 TOGARAM1Q9Y4F4 1720 aa27.9■■■□□ 2.06
MCM4-211ENST00000520994 HSP90AB1P08238 724 aaKnown RBP27.9■■■□□ 2.06
MCM4-211ENST00000520994 LY75O60449 1722 aa27.89■■■□□ 2.06
MCM4-211ENST00000520994 RALBP1Q15311 655 aa27.89■■■□□ 2.06
MCM4-211ENST00000520994 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
MCM4-211ENST00000520994 HMGB2P26583 209 aaKnown RBP27.86■■■□□ 2.05
MCM4-211ENST00000520994 SLC27A3Q5K4L6 730 aa27.86■■■□□ 2.05
MCM4-211ENST00000520994 SYTL4Q96C24 671 aaPredicted RBP27.86■■■□□ 2.05
MCM4-211ENST00000520994 NUDCQ9Y266 331 aa27.86■■■□□ 2.05
MCM4-211ENST00000520994 DCAF5Q96JK2 942 aa27.84■■■□□ 2.05
MCM4-211ENST00000520994 ERVV-2B6SEH9 535 aa27.83■■■□□ 2.05
MCM4-211ENST00000520994 PAPPAQ13219 1627 aa27.82■■■□□ 2.04
MCM4-211ENST00000520994 ZNF530Q6P9A1 599 aaPredicted RBP27.82■■■□□ 2.04
MCM4-211ENST00000520994 HMOX1P09601 288 aa27.81■■■□□ 2.04
MCM4-211ENST00000520994 AKAP4Q5JQC9 854 aa27.8■■■□□ 2.04
MCM4-211ENST00000520994 C1orf141Q5JVX7 400 aa27.8■■■□□ 2.04
MCM4-211ENST00000520994 SMARCC1Q92922 1105 aaPredicted RBP27.8■■■□□ 2.04
MCM4-211ENST00000520994 U2SURPO15042 1029 aaKnown RBP27.79■■■□□ 2.04
MCM4-211ENST00000520994 R3HDM1Q15032 1099 aaKnown RBP27.79■■■□□ 2.04
MCM4-211ENST00000520994 MPRIPQ6WCQ1 1025 aa27.78■■■□□ 2.04
MCM4-211ENST00000520994 SCN11AQ9UI33 1791 aa27.78■■■□□ 2.04
MCM4-211ENST00000520994 PIGBQ92521 554 aa27.77■■■□□ 2.04
MCM4-211ENST00000520994 TMOD3Q9NYL9 352 aa27.77■■■□□ 2.04
MCM4-211ENST00000520994 KDM6AO15550 1401 aaPredicted RBP27.76■■■□□ 2.04
MCM4-211ENST00000520994 ADAMTS7Q9UKP4 1686 aa27.76■■■□□ 2.03
MCM4-211ENST00000520994 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
MCM4-211ENST00000520994 LRRC4BQ9NT99 713 aa27.76■■■□□ 2.03
MCM4-211ENST00000520994 PSDA5PKW4 1024 aaPredicted RBP27.75■■■□□ 2.03
MCM4-211ENST00000520994 FCHSD2O94868 740 aa27.75■■■□□ 2.03
MCM4-211ENST00000520994 SLC15A2Q16348 729 aa27.75■■■□□ 2.03
MCM4-211ENST00000520994 ANO8Q9HCE9 1232 aaPredicted RBP27.75■■■□□ 2.03
MCM4-211ENST00000520994 LRP5O75197 1615 aa27.74■■■□□ 2.03
MCM4-211ENST00000520994 RSPH6AQ9H0K4 717 aa27.74■■■□□ 2.03
MCM4-211ENST00000520994 STK32BQ9NY57 414 aa27.74■■■□□ 2.03
MCM4-211ENST00000520994 QSER1Q2KHR3 1735 aa27.74■■■□□ 2.03
MCM4-211ENST00000520994 PALLDQ8WX93 1383 aa27.73■■■□□ 2.03
MCM4-211ENST00000520994 MTHFSDQ2M296 383 aaKnown RBP27.73■■■□□ 2.03
MCM4-211ENST00000520994 SRCAPQ6ZRS2 3230 aa27.73■■■□□ 2.03
MCM4-211ENST00000520994 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
MCM4-211ENST00000520994 ZNF831Q5JPB2 1677 aa27.72■■■□□ 2.03
MCM4-211ENST00000520994 VIRMAQ69YN4 1812 aaKnown RBP27.72■■■□□ 2.03
MCM4-211ENST00000520994 GAS2L2Q8NHY3 880 aa27.72■■■□□ 2.03
MCM4-211ENST00000520994 TAF1LQ8IZX4 1826 aa27.7■■■□□ 2.02
MCM4-211ENST00000520994 U2AF1L5P0DN76 240 aaPredicted RBP27.7■■■□□ 2.02
MCM4-211ENST00000520994 U2AF1Q01081 240 aaKnown RBP eCLIP27.7■■■□□ 2.02
MCM4-211ENST00000520994 CCNL1Q9UK58 526 aaPredicted RBP27.7■■■□□ 2.02
MCM4-211ENST00000520994 CASZ1Q86V15 1759 aa27.7■■■□□ 2.02
MCM4-211ENST00000520994 PRKRIP1Q9H875 184 aaPredicted RBP27.69■■■□□ 2.02
MCM4-211ENST00000520994 MRC1P22897 1456 aa27.69■■■□□ 2.02
MCM4-211ENST00000520994 AKT1S1Q96B36 256 aa27.68■■■□□ 2.02
MCM4-211ENST00000520994 PRKAR2BP31323 418 aa27.67■■■□□ 2.02
MCM4-211ENST00000520994 CABP4P57796 275 aa27.67■■■□□ 2.02
MCM4-211ENST00000520994 ATG3Q9NT62 314 aa27.67■■■□□ 2.02
MCM4-211ENST00000520994 C5P01031 1676 aa27.66■■■□□ 2.02
MCM4-211ENST00000520994 RNMTO43148 476 aaKnown RBP27.65■■■□□ 2.02
MCM4-211ENST00000520994 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
MCM4-211ENST00000520994 SLC52A2Q9HAB3 445 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms