RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 RAB15P59190 212 aa5.44□□□□□ -1.54
SREK1-208ENST00000520580 CCDC24Q8N4L8 307 aa5.44□□□□□ -1.54
SREK1-208ENST00000520580 TMEM87AQ8NBN3 555 aa5.44□□□□□ -1.54
SREK1-208ENST00000520580 ARMC2Q8NEN0 867 aa5.44□□□□□ -1.54
SREK1-208ENST00000520580 NBPF3Q9H094 633 aa5.44□□□□□ -1.54
SREK1-208ENST00000520580 BCL11AQ9H165 835 aa5.44□□□□□ -1.54
SREK1-208ENST00000520580 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.44□□□□□ -1.54
SREK1-208ENST00000520580 MCCD1P59942 119 aaPredicted RBP5.43□□□□□ -1.54
SREK1-208ENST00000520580 MRPL58Q14197 206 aaKnown RBP5.43□□□□□ -1.54
SREK1-208ENST00000520580 AGERQ15109 404 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
SREK1-208ENST00000520580 CHMP4AQ9BY43 222 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 PCDHB3Q9Y5E6 796 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 SCAMP3O14828 347 aaKnown RBP5.43□□□□□ -1.54
SREK1-208ENST00000520580 WEE1P30291 646 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 SF3B2Q13435 895 aaKnown RBP5.43□□□□□ -1.54
SREK1-208ENST00000520580 VARS2Q5ST30 1063 aaKnown RBP5.43□□□□□ -1.54
SREK1-208ENST00000520580 LDLRAD1Q5T700 205 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 NT5DC4Q86YG4 428 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 PIK3R5Q8WYR1 880 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 TANGO6Q9C0B7 1094 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 UNC93B1Q9H1C4 597 aa5.43□□□□□ -1.54
SREK1-208ENST00000520580 SALL2Q9Y467 1007 aaPredicted RBP5.43□□□□□ -1.54
SREK1-208ENST00000520580 MPSTP25325 297 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 AAMPQ13685 434 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 DPH6Q7L8W6 267 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 GPKOWQ92917 476 aaPredicted RBP eCLIP5.42□□□□□ -1.544e-6■□□□□ 8.7
SREK1-208ENST00000520580 MRS2Q9HD23 443 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 PCDHB11Q9Y5F2 797 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 STAU1O95793 577 aaKnown RBP5.42□□□□□ -1.54
SREK1-208ENST00000520580 XPCQ01831 940 aaPredicted RBP5.42□□□□□ -1.54
SREK1-208ENST00000520580 PTCRAQ6ISU1 281 aaPredicted RBP5.42□□□□□ -1.54
SREK1-208ENST00000520580 SH3BP5LQ7L8J4 393 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 LAPTM4BQ86VI4 370 aa5.42□□□□□ -1.54
SREK1-208ENST00000520580 MRPL50Q8N5N7 158 aaKnown RBP5.42□□□□□ -1.54
SREK1-208ENST00000520580 FAM160A2Q8N612 972 aaPredicted RBP5.42□□□□□ -1.54
SREK1-208ENST00000520580 CHMP7Q8WUX9 453 aaPredicted RBP5.42□□□□□ -1.54
SREK1-208ENST00000520580 RAD51AP2Q09MP3 1159 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 HELQQ8TDG4 1101 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 SPSB2Q99619 263 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 PARP2Q9UGN5 583 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 PTCD1O75127 700 aaKnown RBP5.41□□□□□ -1.54
SREK1-208ENST00000520580 NR1I2O75469 434 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 PPP4CP60510 307 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 USP4Q13107 963 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 LINC01559Q495D7 138 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 SETDB2Q96T68 719 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 PRR14Q9BWN1 585 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 SLC4A5Q9BY07 1137 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 SCUBE2Q9NQ36 999 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 BRPF3Q9ULD4 1205 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 WWC3Q9ULE0 1092 aa5.41□□□□□ -1.54
SREK1-208ENST00000520580 BHMG1C9JSJ3 638 aaPredicted RBP5.4□□□□□ -1.54
SREK1-208ENST00000520580 DXOO77932 396 aaKnown RBP5.4□□□□□ -1.54
SREK1-208ENST00000520580 LDHBP07195 334 aaKnown RBP5.4□□□□□ -1.54
SREK1-208ENST00000520580 COPS2P61201 443 aa5.4□□□□□ -1.54
SREK1-208ENST00000520580 ERFEQ4G0M1 354 aa5.4□□□□□ -1.54
SREK1-208ENST00000520580 DHX38Q92620 1227 aaKnown RBP5.4□□□□□ -1.54
SREK1-208ENST00000520580 DUSP9Q99956 384 aaKnown RBP5.4□□□□□ -1.54
SREK1-208ENST00000520580 SAP130Q9H0E3 1048 aa5.4□□□□□ -1.54
SREK1-208ENST00000520580 IQSEC3Q9UPP2 1182 aaPredicted RBP5.4□□□□□ -1.54
SREK1-208ENST00000520580 ERBB3P21860 1342 aa5.4□□□□□ -1.55
SREK1-208ENST00000520580 TNNI2P48788 182 aa5.4□□□□□ -1.55
SREK1-208ENST00000520580 BCAMP50895 628 aa5.4□□□□□ -1.55
SREK1-208ENST00000520580 SCG3Q8WXD2 468 aaKnown RBP5.4□□□□□ -1.55
SREK1-208ENST00000520580 CCDC87Q9NVE4 849 aa5.4□□□□□ -1.55
SREK1-208ENST00000520580 HPS5Q9UPZ3 1129 aa5.4□□□□□ -1.55
SREK1-208ENST00000520580 TREHO43280 583 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 NDUFB5O43674 189 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 GTF2F1P35269 517 aaKnown RBP eCLIP5.39□□□□□ -1.55
SREK1-208ENST00000520580 SCTRP47872 440 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 C4orf48Q5BLP8 95 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 ZNF662Q6ZS27 426 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 SH3RF1Q7Z6J0 888 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 FOXJ1Q92949 421 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 SLC10A4Q96EP9 437 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 CAPN10Q9HC96 672 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 PRKAG2Q9UGJ0 569 aa5.39□□□□□ -1.55
SREK1-208ENST00000520580 ANKRD62A6NC57 917 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 FAM13AO94988 1023 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 CANXP27824 592 aaKnown RBP5.38□□□□□ -1.55
SREK1-208ENST00000520580 COL19A1Q14993 1142 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 NBPF20Q3BBV1 942 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 METTL16Q86W50 562 aaKnown RBP5.38□□□□□ -1.55
SREK1-208ENST00000520580 TNS4Q8IZW8 715 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 BAP1Q92560 729 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 RBCK1Q9BYM8 510 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 ZNF358Q9NW07 568 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 VTI1BQ9UEU0 232 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 TLL1O43897 1013 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 EHHADHQ08426 723 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 MSS51Q4VC12 460 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 ACBD3Q9H3P7 528 aa5.38□□□□□ -1.55
SREK1-208ENST00000520580 SORBS3O60504 671 aa5.37□□□□□ -1.55
SREK1-208ENST00000520580 DNAJA1P31689 397 aaKnown RBP5.37□□□□□ -1.55
SREK1-208ENST00000520580 MMP16P51512 607 aa5.37□□□□□ -1.55
SREK1-208ENST00000520580 FANCCQ00597 558 aa5.37□□□□□ -1.55
SREK1-208ENST00000520580 FMR1Q06787 632 aaKnown RBP eCLIP5.37□□□□□ -1.55
SREK1-208ENST00000520580 RNF20Q5VTR2 975 aa5.37□□□□□ -1.55
SREK1-208ENST00000520580 TINF2Q9BSI4 451 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms