RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 BCL11BQ9C0K0 894 aaPredicted RBP25.74■■□□□ 1.71
FAM49B-217ENST00000520254 NCAPD2Q15021 1401 aa25.72■■□□□ 1.71
FAM49B-217ENST00000520254 PARD3Q8TEW0 1356 aa25.72■■□□□ 1.71
FAM49B-217ENST00000520254 SPG7Q9UQ90 795 aa25.72■■□□□ 1.71
FAM49B-217ENST00000520254 IGSF1Q8N6C5 1336 aa25.71■■□□□ 1.71
FAM49B-217ENST00000520254 ACSBG1Q96GR2 724 aa25.71■■□□□ 1.71
FAM49B-217ENST00000520254 CFAP53Q96M91 514 aa25.71■■□□□ 1.71
FAM49B-217ENST00000520254 DDX10Q13206 875 aaKnown RBP25.69■■□□□ 1.7
FAM49B-217ENST00000520254 SBF2Q86WG5 1849 aa25.69■■□□□ 1.7
FAM49B-217ENST00000520254 DIAPH1O60610 1272 aaKnown RBP25.68■■□□□ 1.7
FAM49B-217ENST00000520254 SYTL4Q96C24 671 aaPredicted RBP25.68■■□□□ 1.7
FAM49B-217ENST00000520254 NHSQ6T4R5 1651 aa25.68■■□□□ 1.7
FAM49B-217ENST00000520254 PLEKHG2Q9H7P9 1386 aa25.67■■□□□ 1.7
FAM49B-217ENST00000520254 EZH2Q15910 746 aaKnown RBP25.66■■□□□ 1.7
FAM49B-217ENST00000520254 IL13P35225 146 aa25.65■■□□□ 1.7
FAM49B-217ENST00000520254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.65■■□□□ 1.7
FAM49B-217ENST00000520254 PKD1L3Q7Z443 1732 aa25.65■■□□□ 1.7
FAM49B-217ENST00000520254 SHANK3Q9BYB0 1731 aa25.65■■□□□ 1.7
FAM49B-217ENST00000520254 SULT6B1Q6IMI4 303 aa25.64■■□□□ 1.7
FAM49B-217ENST00000520254 CAMKK2Q96RR4 588 aa25.64■■□□□ 1.7
FAM49B-217ENST00000520254 KCNQ2O43526 872 aa25.63■■□□□ 1.69
FAM49B-217ENST00000520254 PPP2R1AP30153 589 aa25.62■■□□□ 1.69
FAM49B-217ENST00000520254 PLEKHO1Q53GL0 409 aaPredicted RBP25.62■■□□□ 1.69
FAM49B-217ENST00000520254 DOT1LQ8TEK3 1739 aa25.61■■□□□ 1.69
FAM49B-217ENST00000520254 U2SURPO15042 1029 aaKnown RBP25.61■■□□□ 1.69
FAM49B-217ENST00000520254 PLSCR1O15162 318 aa25.61■■□□□ 1.69
FAM49B-217ENST00000520254 AMOTQ4VCS5 1084 aa25.61■■□□□ 1.69
FAM49B-217ENST00000520254 RGPD3A6NKT7 1758 aaPredicted RBP25.6■■□□□ 1.69
FAM49B-217ENST00000520254 RGPD4Q7Z3J3 1758 aa25.6■■□□□ 1.69
FAM49B-217ENST00000520254 PTF1AQ7RTS3 328 aa25.6■■□□□ 1.69
FAM49B-217ENST00000520254 AEBP1Q8IUX7 1158 aa25.6■■□□□ 1.69
FAM49B-217ENST00000520254 IFNL2Q8IZJ0 200 aa25.6■■□□□ 1.69
FAM49B-217ENST00000520254 NBPF14Q5TI25 921 aa25.59■■□□□ 1.69
FAM49B-217ENST00000520254 NUDCQ9Y266 331 aa25.59■■□□□ 1.69
FAM49B-217ENST00000520254 CYP27B1O15528 508 aa25.58■■□□□ 1.69
FAM49B-217ENST00000520254 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
FAM49B-217ENST00000520254 KDRP35968 1356 aa25.57■■□□□ 1.68
FAM49B-217ENST00000520254 KAT6BQ8WYB5 2073 aa25.57■■□□□ 1.68
FAM49B-217ENST00000520254 HMOX1P09601 288 aa25.57■■□□□ 1.68
FAM49B-217ENST00000520254 C1orf141Q5JVX7 400 aa25.57■■□□□ 1.68
FAM49B-217ENST00000520254 RREB1Q92766 1687 aa25.56■■□□□ 1.68
FAM49B-217ENST00000520254 COL3A1P02461 1466 aaPredicted RBP25.56■■□□□ 1.68
FAM49B-217ENST00000520254 RALBP1Q15311 655 aa25.56■■□□□ 1.68
FAM49B-217ENST00000520254 ZNF530Q6P9A1 599 aaPredicted RBP25.56■■□□□ 1.68
FAM49B-217ENST00000520254 HSP90AB1P08238 724 aaKnown RBP25.55■■□□□ 1.68
FAM49B-217ENST00000520254 BTAF1O14981 1849 aa25.55■■□□□ 1.68
FAM49B-217ENST00000520254 PHKG2P15735 406 aa25.54■■□□□ 1.68
FAM49B-217ENST00000520254 ZNF316A6NFI3 1004 aaPredicted RBP25.53■■□□□ 1.68
FAM49B-217ENST00000520254 NUP188Q5SRE5 1749 aa25.52■■□□□ 1.68
FAM49B-217ENST00000520254 TXNRD1Q16881 649 aa25.52■■□□□ 1.68
FAM49B-217ENST00000520254 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
FAM49B-217ENST00000520254 NKX1-1Q15270 411 aaPredicted RBP25.51■■□□□ 1.67
FAM49B-217ENST00000520254 PSDA5PKW4 1024 aaPredicted RBP25.49■■□□□ 1.67
FAM49B-217ENST00000520254 TMOD3Q9NYL9 352 aa25.49■■□□□ 1.67
FAM49B-217ENST00000520254 U2AF1L5P0DN76 240 aaPredicted RBP25.48■■□□□ 1.67
FAM49B-217ENST00000520254 U2AF1Q01081 240 aaKnown RBP eCLIP25.48■■□□□ 1.67
FAM49B-217ENST00000520254 R3HDM1Q15032 1099 aaKnown RBP25.48■■□□□ 1.67
FAM49B-217ENST00000520254 DCAF5Q96JK2 942 aa25.48■■□□□ 1.67
FAM49B-217ENST00000520254 STK32BQ9NY57 414 aa25.46■■□□□ 1.67
FAM49B-217ENST00000520254 TOGARAM1Q9Y4F4 1720 aa25.46■■□□□ 1.67
FAM49B-217ENST00000520254 MYBBP1AQ9BQG0 1328 aaKnown RBP25.45■■□□□ 1.66
FAM49B-217ENST00000520254 SLC27A3Q5K4L6 730 aa25.45■■□□□ 1.66
FAM49B-217ENST00000520254 SMARCC1Q92922 1105 aaPredicted RBP25.45■■□□□ 1.66
FAM49B-217ENST00000520254 NEFMP07197 916 aa25.44■■□□□ 1.66
FAM49B-217ENST00000520254 AKAP4Q5JQC9 854 aa25.44■■□□□ 1.66
FAM49B-217ENST00000520254 HMGB2P26583 209 aaKnown RBP25.43■■□□□ 1.66
FAM49B-217ENST00000520254 ERVV-2B6SEH9 535 aa25.42■■□□□ 1.66
FAM49B-217ENST00000520254 CABP4P57796 275 aa25.42■■□□□ 1.66
FAM49B-217ENST00000520254 PROM2Q8N271 834 aa25.42■■□□□ 1.66
FAM49B-217ENST00000520254 GAS2L2Q8NHY3 880 aa25.42■■□□□ 1.66
FAM49B-217ENST00000520254 CCNL1Q9UK58 526 aaPredicted RBP25.42■■□□□ 1.66
FAM49B-217ENST00000520254 PALLDQ8WX93 1383 aa25.42■■□□□ 1.66
FAM49B-217ENST00000520254 PRKAR2BP31323 418 aa25.41■■□□□ 1.66
FAM49B-217ENST00000520254 ITGB4P16144 1822 aa25.4■■□□□ 1.66
FAM49B-217ENST00000520254 PIGBQ92521 554 aa25.4■■□□□ 1.66
FAM49B-217ENST00000520254 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.66
FAM49B-217ENST00000520254 KDM6AO15550 1401 aaPredicted RBP25.38■■□□□ 1.65
FAM49B-217ENST00000520254 FCHSD2O94868 740 aa25.38■■□□□ 1.65
FAM49B-217ENST00000520254 RSPH6AQ9H0K4 717 aa25.38■■□□□ 1.65
FAM49B-217ENST00000520254 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
FAM49B-217ENST00000520254 ANO8Q9HCE9 1232 aaPredicted RBP25.37■■□□□ 1.65
FAM49B-217ENST00000520254 PRKRIP1Q9H875 184 aaPredicted RBP25.36■■□□□ 1.65
FAM49B-217ENST00000520254 LY75O60449 1722 aa25.36■■□□□ 1.65
FAM49B-217ENST00000520254 SLC15A2Q16348 729 aa25.35■■□□□ 1.65
FAM49B-217ENST00000520254 MAP3K5Q99683 1374 aa25.34■■□□□ 1.65
FAM49B-217ENST00000520254 LRRC4BQ9NT99 713 aa25.34■■□□□ 1.65
FAM49B-217ENST00000520254 GNAT3A8MTJ3 354 aa25.33■■□□□ 1.65
FAM49B-217ENST00000520254 KCNQ4P56696 695 aa25.32■■□□□ 1.64
FAM49B-217ENST00000520254 PAPPAQ13219 1627 aa25.32■■□□□ 1.64
FAM49B-217ENST00000520254 MAPK8IP3Q9UPT6 1336 aa25.32■■□□□ 1.64
FAM49B-217ENST00000520254 RNMTO43148 476 aaKnown RBP25.31■■□□□ 1.64
FAM49B-217ENST00000520254 WDR43Q15061 677 aaKnown RBP eCLIP25.31■■□□□ 1.64
FAM49B-217ENST00000520254 ASAP1Q9ULH1 1129 aa25.31■■□□□ 1.64
FAM49B-217ENST00000520254 NFATC2IPQ8NCF5 419 aa25.3■■□□□ 1.64
FAM49B-217ENST00000520254 RTF1Q92541 710 aaKnown RBP25.3■■□□□ 1.64
FAM49B-217ENST00000520254 TFCP2L1Q9NZI6 479 aa25.3■■□□□ 1.64
FAM49B-217ENST00000520254 SCN11AQ9UI33 1791 aa25.3■■□□□ 1.64
FAM49B-217ENST00000520254 LOC102724428A0A0B4J2F2 783 aa25.29■■□□□ 1.64
FAM49B-217ENST00000520254 SIK1P57059 783 aa25.29■■□□□ 1.64
FAM49B-217ENST00000520254 TEFQ10587 303 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms