RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-214ENST00000520142 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
PABPC1-214ENST00000520142 IGSF1Q8N6C5 1336 aa15.16■□□□□ 0.02
PABPC1-214ENST00000520142 NHSQ6T4R5 1651 aa15.16■□□□□ 0.02
PABPC1-214ENST00000520142 PLSCR1O15162 318 aa15.15■□□□□ 0.02
PABPC1-214ENST00000520142 EZH2Q15910 746 aaKnown RBP15.15■□□□□ 0.02
PABPC1-214ENST00000520142 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
PABPC1-214ENST00000520142 RREB1Q92766 1687 aa15.15■□□□□ 0.02
PABPC1-214ENST00000520142 PKD1L3Q7Z443 1732 aa15.14■□□□□ 0.01
PABPC1-214ENST00000520142 PLEKHG2Q9H7P9 1386 aa15.14■□□□□ 0.01
PABPC1-214ENST00000520142 KCNQ2O43526 872 aa15.14■□□□□ 0.01
PABPC1-214ENST00000520142 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
PABPC1-214ENST00000520142 TATP17735 454 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-214ENST00000520142 IL13P35225 146 aa15.13■□□□□ 0.01
PABPC1-214ENST00000520142 MTHFSP49914 203 aa15.13■□□□□ 0.01
PABPC1-214ENST00000520142 DDX54Q8TDD1 881 aaKnown RBP15.13■□□□□ 0.01
PABPC1-214ENST00000520142 PROM2Q8N271 834 aa15.12■□□□□ 0.01
PABPC1-214ENST00000520142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
PABPC1-214ENST00000520142 CYP27B1O15528 508 aa15.11■□□□□ 0.01
PABPC1-214ENST00000520142 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
PABPC1-214ENST00000520142 KDRP35968 1356 aa15.11■□□□□ 0.01
PABPC1-214ENST00000520142 COL3A1P02461 1466 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-214ENST00000520142 NKX1-1Q15270 411 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-214ENST00000520142 ACSBG1Q96GR2 724 aa15.09■□□□□ 0.01
PABPC1-214ENST00000520142 PCDH11XQ9BZA7 1347 aa15.09■□□□□ 0.01
PABPC1-214ENST00000520142 PCDH11YQ9BZA8 1340 aa15.09■□□□□ 0.01
PABPC1-214ENST00000520142 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
PABPC1-214ENST00000520142 BTAF1O14981 1849 aa15.08■□□□□ 0
PABPC1-214ENST00000520142 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
PABPC1-214ENST00000520142 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
PABPC1-214ENST00000520142 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
PABPC1-214ENST00000520142 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
PABPC1-214ENST00000520142 SPG7Q9UQ90 795 aa15.06■□□□□ 0
PABPC1-214ENST00000520142 TXNRD1Q16881 649 aa15.05■□□□□ -0
PABPC1-214ENST00000520142 PHKG2P15735 406 aa15.04■□□□□ -0
PABPC1-214ENST00000520142 PPP2R1AP30153 589 aa15.04■□□□□ -0
PABPC1-214ENST00000520142 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
PABPC1-214ENST00000520142 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
PABPC1-214ENST00000520142 PAPPAQ13219 1627 aa15.03■□□□□ -0
PABPC1-214ENST00000520142 PSDA5PKW4 1024 aaPredicted RBP15.02■□□□□ -0
PABPC1-214ENST00000520142 CNGB1Q14028 1251 aaPredicted RBP15.02■□□□□ -0
PABPC1-214ENST00000520142 IFNL2Q8IZJ0 200 aa15.02■□□□□ -0
PABPC1-214ENST00000520142 ANO8Q9HCE9 1232 aaPredicted RBP15.02■□□□□ -0
PABPC1-214ENST00000520142 LY75O60449 1722 aa15.02□□□□□ -0.01
PABPC1-214ENST00000520142 R3HDM1Q15032 1099 aaKnown RBP15.01□□□□□ -0.01
PABPC1-214ENST00000520142 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
PABPC1-214ENST00000520142 PLEKHO1Q53GL0 409 aaPredicted RBP15.01□□□□□ -0.01
PABPC1-214ENST00000520142 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
PABPC1-214ENST00000520142 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
PABPC1-214ENST00000520142 ITGB4P16144 1822 aa15□□□□□ -0.01
PABPC1-214ENST00000520142 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
PABPC1-214ENST00000520142 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
PABPC1-214ENST00000520142 KDM6AO15550 1401 aaPredicted RBP14.99□□□□□ -0.01
PABPC1-214ENST00000520142 HMOX1P09601 288 aa14.98□□□□□ -0.01
PABPC1-214ENST00000520142 SLC27A3Q5K4L6 730 aa14.98□□□□□ -0.01
PABPC1-214ENST00000520142 PIGBQ92521 554 aa14.98□□□□□ -0.01
PABPC1-214ENST00000520142 DCAF5Q96JK2 942 aa14.97□□□□□ -0.01
PABPC1-214ENST00000520142 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
PABPC1-214ENST00000520142 LRP5O75197 1615 aa14.96□□□□□ -0.01
PABPC1-214ENST00000520142 SLC15A2Q16348 729 aa14.96□□□□□ -0.01
PABPC1-214ENST00000520142 ZNF530Q6P9A1 599 aaPredicted RBP14.96□□□□□ -0.01
PABPC1-214ENST00000520142 MPRIPQ6WCQ1 1025 aa14.96□□□□□ -0.01
PABPC1-214ENST00000520142 ADAMTS7Q9UKP4 1686 aa14.96□□□□□ -0.01
PABPC1-214ENST00000520142 CASZ1Q86V15 1759 aa14.96□□□□□ -0.02
PABPC1-214ENST00000520142 ERVV-2B6SEH9 535 aa14.95□□□□□ -0.02
PABPC1-214ENST00000520142 HSP90AB1P08238 724 aaKnown RBP14.95□□□□□ -0.02
PABPC1-214ENST00000520142 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
PABPC1-214ENST00000520142 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
PABPC1-214ENST00000520142 RALBP1Q15311 655 aa14.94□□□□□ -0.02
PABPC1-214ENST00000520142 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
PABPC1-214ENST00000520142 PALLDQ8WX93 1383 aa14.94□□□□□ -0.02
PABPC1-214ENST00000520142 U2SURPO15042 1029 aaKnown RBP14.93□□□□□ -0.02
PABPC1-214ENST00000520142 KCNQ4P56696 695 aa14.93□□□□□ -0.02
PABPC1-214ENST00000520142 ZNF827Q17R98 1081 aa14.93□□□□□ -0.02
PABPC1-214ENST00000520142 AKAP4Q5JQC9 854 aa14.93□□□□□ -0.02
PABPC1-214ENST00000520142 PDGFDQ9GZP0 370 aaPredicted RBP14.93□□□□□ -0.02
PABPC1-214ENST00000520142 RSPH6AQ9H0K4 717 aa14.93□□□□□ -0.02
PABPC1-214ENST00000520142 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
PABPC1-214ENST00000520142 ATG3Q9NT62 314 aa14.92□□□□□ -0.02
PABPC1-214ENST00000520142 STK32BQ9NY57 414 aa14.92□□□□□ -0.02
PABPC1-214ENST00000520142 TMOD3Q9NYL9 352 aa14.92□□□□□ -0.02
PABPC1-214ENST00000520142 SCN11AQ9UI33 1791 aa14.92□□□□□ -0.02
PABPC1-214ENST00000520142 MRC1P22897 1456 aa14.91□□□□□ -0.02
PABPC1-214ENST00000520142 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
PABPC1-214ENST00000520142 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
PABPC1-214ENST00000520142 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
PABPC1-214ENST00000520142 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
PABPC1-214ENST00000520142 NUDCQ9Y266 331 aa14.91□□□□□ -0.02
PABPC1-214ENST00000520142 QSER1Q2KHR3 1735 aa14.91□□□□□ -0.02
PABPC1-214ENST00000520142 FCHSD2O94868 740 aa14.9□□□□□ -0.02
PABPC1-214ENST00000520142 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
PABPC1-214ENST00000520142 ZNF831Q5JPB2 1677 aa14.9□□□□□ -0.02
PABPC1-214ENST00000520142 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
PABPC1-214ENST00000520142 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
PABPC1-214ENST00000520142 C5P01031 1676 aa14.89□□□□□ -0.03
PABPC1-214ENST00000520142 LOC102724428A0A0B4J2F2 783 aa14.88□□□□□ -0.03
PABPC1-214ENST00000520142 RNMTO43148 476 aaKnown RBP14.88□□□□□ -0.03
PABPC1-214ENST00000520142 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
PABPC1-214ENST00000520142 SIK1P57059 783 aa14.88□□□□□ -0.03
PABPC1-214ENST00000520142 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms