RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 BCAR3O75815 825 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 AAMPQ13685 434 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 RRP1P56182 461 aaKnown RBP12.99□□□□□ -0.33
MCPH1-203ENST00000519480 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
MCPH1-203ENST00000519480 KIF24Q5T7B8 1368 aa12.98□□□□□ -0.33
MCPH1-203ENST00000519480 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-203ENST00000519480 UBAP1LF5GYI3 381 aa12.98□□□□□ -0.33
MCPH1-203ENST00000519480 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
MCPH1-203ENST00000519480 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
MCPH1-203ENST00000519480 KDRP35968 1356 aa12.97□□□□□ -0.33
MCPH1-203ENST00000519480 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
MCPH1-203ENST00000519480 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
MCPH1-203ENST00000519480 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
MCPH1-203ENST00000519480 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
MCPH1-203ENST00000519480 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
MCPH1-203ENST00000519480 ERBB3P21860 1342 aa12.97□□□□□ -0.33
MCPH1-203ENST00000519480 CRYBG1Q9Y4K1 1723 aa12.96□□□□□ -0.33
MCPH1-203ENST00000519480 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
MCPH1-203ENST00000519480 MYH16Q9H6N6 1097 aa12.96□□□□□ -0.33
MCPH1-203ENST00000519480 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
MCPH1-203ENST00000519480 TCERG1O14776 1098 aaKnown RBP12.95□□□□□ -0.34
MCPH1-203ENST00000519480 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
MCPH1-203ENST00000519480 COL18A1P39060 1754 aa12.94□□□□□ -0.34
MCPH1-203ENST00000519480 TOM1O60784 492 aa12.94□□□□□ -0.34
MCPH1-203ENST00000519480 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
MCPH1-203ENST00000519480 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
MCPH1-203ENST00000519480 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
MCPH1-203ENST00000519480 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
MCPH1-203ENST00000519480 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
MCPH1-203ENST00000519480 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
MCPH1-203ENST00000519480 FRAT1Q92837 279 aaPredicted RBP12.93□□□□□ -0.34
MCPH1-203ENST00000519480 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
MCPH1-203ENST00000519480 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
MCPH1-203ENST00000519480 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
MCPH1-203ENST00000519480 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 ZNF530Q6P9A1 599 aaPredicted RBP12.91□□□□□ -0.34
MCPH1-203ENST00000519480 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
MCPH1-203ENST00000519480 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 IL16Q14005 1332 aa12.91□□□□□ -0.34
MCPH1-203ENST00000519480 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
MCPH1-203ENST00000519480 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
MCPH1-203ENST00000519480 CPDO75976 1380 aa12.9□□□□□ -0.34
MCPH1-203ENST00000519480 COL22A1Q8NFW1 1626 aaPredicted RBP12.9□□□□□ -0.34
MCPH1-203ENST00000519480 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
MCPH1-203ENST00000519480 EVA1CP58658 441 aa12.9□□□□□ -0.34
MCPH1-203ENST00000519480 GNAI1P63096 354 aa12.9□□□□□ -0.34
MCPH1-203ENST00000519480 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
MCPH1-203ENST00000519480 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
MCPH1-203ENST00000519480 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 IFT57Q9NWB7 429 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 BTG4Q9NY30 223 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
MCPH1-203ENST00000519480 CALD1Q05682 793 aaKnown RBP12.88□□□□□ -0.35
MCPH1-203ENST00000519480 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
MCPH1-203ENST00000519480 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
MCPH1-203ENST00000519480 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
MCPH1-203ENST00000519480 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
MCPH1-203ENST00000519480 MEGF6O75095 1541 aa12.88□□□□□ -0.35
MCPH1-203ENST00000519480 PANK1Q8TE04 598 aa12.87□□□□□ -0.35
MCPH1-203ENST00000519480 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
MCPH1-203ENST00000519480 CRB1P82279 1406 aa12.87□□□□□ -0.35
MCPH1-203ENST00000519480 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
MCPH1-203ENST00000519480 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
MCPH1-203ENST00000519480 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
MCPH1-203ENST00000519480 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
MCPH1-203ENST00000519480 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
MCPH1-203ENST00000519480 CHL1O00533 1208 aa12.85□□□□□ -0.35
MCPH1-203ENST00000519480 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
MCPH1-203ENST00000519480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
MCPH1-203ENST00000519480 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
MCPH1-203ENST00000519480 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
MCPH1-203ENST00000519480 VAMP4O75379 141 aa12.85□□□□□ -0.35
MCPH1-203ENST00000519480 NECTIN2Q92692 538 aa12.85□□□□□ -0.35
MCPH1-203ENST00000519480 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
MCPH1-203ENST00000519480 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
MCPH1-203ENST00000519480 NCAPD2Q15021 1401 aa12.84□□□□□ -0.35
MCPH1-203ENST00000519480 KCNQ3O43525 872 aa12.84□□□□□ -0.35
MCPH1-203ENST00000519480 RLBP1P12271 317 aa12.84□□□□□ -0.35
MCPH1-203ENST00000519480 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
MCPH1-203ENST00000519480 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
MCPH1-203ENST00000519480 IGSF3O75054 1194 aa12.83□□□□□ -0.36
MCPH1-203ENST00000519480 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms