RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 HDAC5Q9UQL6 1122 aa7.01□□□□□ -1.29
AP3B1-204ENST00000519295 UBR2Q8IWV8 1755 aa7.01□□□□□ -1.29
AP3B1-204ENST00000519295 CLGNO14967 610 aa7.01□□□□□ -1.29
AP3B1-204ENST00000519295 DCAF11Q8TEB1 546 aa7.01□□□□□ -1.29
AP3B1-204ENST00000519295 CACTIN-AS1Q8N1I8 211 aa7□□□□□ -1.29
AP3B1-204ENST00000519295 VPS72Q15906 364 aa7□□□□□ -1.29
AP3B1-204ENST00000519295 SUGT1Q9Y2Z0 365 aa7□□□□□ -1.29
AP3B1-204ENST00000519295 CEP120Q8N960 986 aa7□□□□□ -1.29
AP3B1-204ENST00000519295 ARFGEF1Q9Y6D6 1849 aa6.99□□□□□ -1.29
AP3B1-204ENST00000519295 ZSCAN20P17040 1043 aaPredicted RBP6.99□□□□□ -1.29
AP3B1-204ENST00000519295 YY1AP1Q9H869 796 aa6.99□□□□□ -1.29
AP3B1-204ENST00000519295 CCDC184Q52MB2 194 aa6.99□□□□□ -1.29
AP3B1-204ENST00000519295 GPATCH11Q8N954 259 aa6.99□□□□□ -1.29
AP3B1-204ENST00000519295 COL5A2P05997 1499 aaPredicted RBP6.99□□□□□ -1.29
AP3B1-204ENST00000519295 UBR3Q6ZT12 1888 aa6.99□□□□□ -1.29
AP3B1-204ENST00000519295 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
AP3B1-204ENST00000519295 NPHP3Q7Z494 1330 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 TTC36A6NLP5 189 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 VGLL3A8MV65 326 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 PROSER2Q86WR7 435 aaPredicted RBP6.98□□□□□ -1.29
AP3B1-204ENST00000519295 OTUD6BQ8N6M0 293 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 TSPAN18Q96SJ8 248 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 ITGB4P16144 1822 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 DOT1LQ8TEK3 1739 aa6.98□□□□□ -1.29
AP3B1-204ENST00000519295 ZC3H12AQ5D1E8 599 aaKnown RBP6.98□□□□□ -1.29
AP3B1-204ENST00000519295 PPM1GO15355 546 aaPredicted RBP6.97□□□□□ -1.29
AP3B1-204ENST00000519295 RGL3Q3MIN7 710 aa6.97□□□□□ -1.29
AP3B1-204ENST00000519295 FOXD4L5Q5VV16 416 aaPredicted RBP6.97□□□□□ -1.29
AP3B1-204ENST00000519295 FOXD4L4Q8WXT5 416 aaPredicted RBP6.97□□□□□ -1.29
AP3B1-204ENST00000519295 MTA1Q13330 715 aa6.97□□□□□ -1.29
AP3B1-204ENST00000519295 DDX46Q7L014 1031 aaKnown RBP6.97□□□□□ -1.29
AP3B1-204ENST00000519295 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
AP3B1-204ENST00000519295 RINLQ6ZS11 566 aa6.97□□□□□ -1.29
AP3B1-204ENST00000519295 GEMIN8Q9NWZ8 242 aaKnown RBP6.97□□□□□ -1.29
AP3B1-204ENST00000519295 BARGINQ6ZT62 677 aa6.96□□□□□ -1.29
AP3B1-204ENST00000519295 THSD7BQ9C0I4 1608 aa6.96□□□□□ -1.3
AP3B1-204ENST00000519295 CAPN2P17655 700 aa6.96□□□□□ -1.3
AP3B1-204ENST00000519295 CCER1Q8TC90 406 aaPredicted RBP6.96□□□□□ -1.3
AP3B1-204ENST00000519295 NSD2O96028 1365 aa6.96□□□□□ -1.3
AP3B1-204ENST00000519295 DMTNQ08495 405 aa6.96□□□□□ -1.3
AP3B1-204ENST00000519295 DDRGK1Q96HY6 314 aa6.96□□□□□ -1.3
AP3B1-204ENST00000519295 AFF2P51816 1311 aa6.96□□□□□ -1.3
AP3B1-204ENST00000519295 PPP1R15AO75807 674 aaPredicted RBP6.95□□□□□ -1.3
AP3B1-204ENST00000519295 SMAP1Q8IYB5 467 aaPredicted RBP6.95□□□□□ -1.3
AP3B1-204ENST00000519295 SMG6Q86US8 1419 aaKnown RBP6.95□□□□□ -1.3
AP3B1-204ENST00000519295 UVSSAQ2YD98 709 aa6.95□□□□□ -1.3
AP3B1-204ENST00000519295 MPNDQ8N594 471 aa6.95□□□□□ -1.3
AP3B1-204ENST00000519295 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
AP3B1-204ENST00000519295 PLEKHG3A1L390 1219 aa6.95□□□□□ -1.3
AP3B1-204ENST00000519295 RGPD2P0DJD1 1756 aa6.94□□□□□ -1.3
AP3B1-204ENST00000519295 CCDC189A1A4V9 331 aa6.94□□□□□ -1.3
AP3B1-204ENST00000519295 TRPC5Q9UL62 973 aaPredicted RBP6.94□□□□□ -1.3
AP3B1-204ENST00000519295 NEFMP07197 916 aa6.94□□□□□ -1.3
AP3B1-204ENST00000519295 OVOS2A0A0J9YW53 1432 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 OVOS2Q6IE36 1432 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 C4AP0C0L4 1744 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 C4BP0C0L5 1744 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 RXRBP28702 533 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 EP400NLQ6ZTU2 488 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 NINLQ9Y2I6 1382 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 SPATA31A5Q5VU36 1347 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 SPATA31A7Q8IWB4 1347 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 HSP90AB4PQ58FF6 505 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 DIEXFQ68CQ4 756 aaKnown RBP6.93□□□□□ -1.3
AP3B1-204ENST00000519295 SPTY2D1Q68D10 685 aaPredicted RBP6.93□□□□□ -1.3
AP3B1-204ENST00000519295 BCORQ6W2J9 1755 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 STK26Q9P289 416 aa6.93□□□□□ -1.3
AP3B1-204ENST00000519295 THRAP3Q9Y2W1 955 aaKnown RBP6.93□□□□□ -1.3
AP3B1-204ENST00000519295 TJP1Q07157 1748 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 USP6P35125 1406 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 TRAIPQ9BWF2 469 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 KIF24Q5T7B8 1368 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 UNCXA6NJT0 531 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 CLEC4GQ6UXB4 293 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 NBPF9Q3BBW0 867 aa6.92□□□□□ -1.3
AP3B1-204ENST00000519295 ADGRF5Q8IZF2 1346 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 COQ9O75208 318 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 SCP2P22307 547 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 UNC5CLQ8IV45 518 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 SCN11AQ9UI33 1791 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 PTMAP06454 111 aaKnown RBP6.91□□□□□ -1.3
AP3B1-204ENST00000519295 C10orf71Q711Q0 1435 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 ATF3P18847 181 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 C11orf91Q3C1V1 193 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 PPP4R3BQ5MIZ7 849 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 SLC26A8Q96RN1 970 aa6.91□□□□□ -1.3
AP3B1-204ENST00000519295 AXDND1Q5T1B0 1012 aaPredicted RBP6.9□□□□□ -1.3
AP3B1-204ENST00000519295 PDCL3Q9H2J4 239 aa6.9□□□□□ -1.3
AP3B1-204ENST00000519295 MRC1P22897 1456 aa6.9□□□□□ -1.3
AP3B1-204ENST00000519295 TNRC6CQ9HCJ0 1690 aaKnown RBP6.9□□□□□ -1.3
AP3B1-204ENST00000519295 TULP2O00295 520 aa6.9□□□□□ -1.3
AP3B1-204ENST00000519295 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.31
AP3B1-204ENST00000519295 GJD4Q96KN9 370 aaPredicted RBP6.9□□□□□ -1.31
AP3B1-204ENST00000519295 EXOC5O00471 708 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 SSFA2P28290 1259 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 RHBDL3P58872 404 aa6.89□□□□□ -1.31
AP3B1-204ENST00000519295 CHMP4CQ96CF2 233 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms