RNA–Protein interactions for RNA: ENST00000518517.5

TPD52-208, Transcript of tumor protein D52, human

TSL 4

Gene TPD52, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPD52-208	ENST00000518517	APLP1	P51693	650 aa		13.85	□□□□□ -0.19
TPD52-208	ENST00000518517	DDX54	Q8TDD1	881 aa	Known RBP	13.85	□□□□□ -0.19
TPD52-208	ENST00000518517	SYTL4	Q96C24	671 aa	Predicted RBP	13.85	□□□□□ -0.19
TPD52-208	ENST00000518517	ERBB3	P21860	1342 aa		13.85	□□□□□ -0.19
TPD52-208	ENST00000518517	ADCY9	O60503	1353 aa		13.84	□□□□□ -0.19
TPD52-208	ENST00000518517	RAB3GAP2	Q9H2M9	1393 aa		13.84	□□□□□ -0.19
TPD52-208	ENST00000518517	NBPF1	Q3BBV0	1214 aa		13.84	□□□□□ -0.19
TPD52-208	ENST00000518517	CD2AP	Q9Y5K6	639 aa		13.84	□□□□□ -0.19
TPD52-208	ENST00000518517	FAM208A	Q9UK61	1670 aa	Known RBP	13.84	□□□□□ -0.19
TPD52-208	ENST00000518517	EVC2	Q86UK5	1308 aa		13.84	□□□□□ -0.19
TPD52-208	ENST00000518517	KCNQ4	P56696	695 aa		13.83	□□□□□ -0.2
TPD52-208	ENST00000518517	MON2	Q7Z3U7	1717 aa		13.82	□□□□□ -0.2
TPD52-208	ENST00000518517	MSL1	Q68DK7	614 aa		13.82	□□□□□ -0.2
TPD52-208	ENST00000518517	COL23A1	Q86Y22	540 aa	Predicted RBP	13.82	□□□□□ -0.2
TPD52-208	ENST00000518517	C5	P01031	1676 aa		13.82	□□□□□ -0.2
TPD52-208	ENST00000518517	ANKRD24	Q8TF21	1146 aa		13.81	□□□□□ -0.2
TPD52-208	ENST00000518517	CCNL1	Q9UK58	526 aa	Predicted RBP	13.81	□□□□□ -0.2
TPD52-208	ENST00000518517	USP54	Q70EL1	1684 aa		13.81	□□□□□ -0.2
TPD52-208	ENST00000518517	KTN1	Q86UP2	1357 aa	Known RBP	13.81	□□□□□ -0.2
TPD52-208	ENST00000518517	WDR90	Q96KV7	1748 aa		13.81	□□□□□ -0.2
TPD52-208	ENST00000518517	PRIM1	P49642	420 aa	Known RBP	13.8	□□□□□ -0.2
TPD52-208	ENST00000518517	TAF1L	Q8IZX4	1826 aa		13.8	□□□□□ -0.2
TPD52-208	ENST00000518517	KIF3C	O14782	793 aa		13.79	□□□□□ -0.2
TPD52-208	ENST00000518517	HMGB2	P26583	209 aa	Known RBP	13.79	□□□□□ -0.2
TPD52-208	ENST00000518517	ANKRD36B	Q8N2N9	1353 aa		13.79	□□□□□ -0.2
TPD52-208	ENST00000518517	FLAD1	Q8NFF5	587 aa		13.78	□□□□□ -0.2
TPD52-208	ENST00000518517	DSG3	P32926	999 aa		13.77	□□□□□ -0.21
TPD52-208	ENST00000518517	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	1e-8	■■■■■ 28.6
TPD52-208	ENST00000518517	DNAJC5G	Q8N7S2	189 aa		13.77	□□□□□ -0.21
TPD52-208	ENST00000518517	USP47	Q96K76	1375 aa		13.77	□□□□□ -0.21
TPD52-208	ENST00000518517	RGPD2	P0DJD1	1756 aa		13.76	□□□□□ -0.21
TPD52-208	ENST00000518517	TOMM70	O94826	608 aa		13.76	□□□□□ -0.21
TPD52-208	ENST00000518517	USP31	Q70CQ4	1352 aa		13.75	□□□□□ -0.21
TPD52-208	ENST00000518517	IGSF1	Q8N6C5	1336 aa		13.75	□□□□□ -0.21
TPD52-208	ENST00000518517	WWC3	Q9ULE0	1092 aa		13.75	□□□□□ -0.21
TPD52-208	ENST00000518517	NSD2	O96028	1365 aa		13.73	□□□□□ -0.21
TPD52-208	ENST00000518517	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.73	□□□□□ -0.21
TPD52-208	ENST00000518517	TNS4	Q8IZW8	715 aa		13.73	□□□□□ -0.21
TPD52-208	ENST00000518517	LTV1	Q96GA3	475 aa	Predicted RBP	13.73	□□□□□ -0.21
TPD52-208	ENST00000518517	UBR3	Q6ZT12	1888 aa		13.72	□□□□□ -0.21
TPD52-208	ENST00000518517	ZCRB1	Q8TBF4	217 aa	Known RBP	13.72	□□□□□ -0.21
TPD52-208	ENST00000518517	C4B	P0C0L5	1744 aa		13.71	□□□□□ -0.21
TPD52-208	ENST00000518517	PRELP	P51888	382 aa		13.71	□□□□□ -0.21
TPD52-208	ENST00000518517	NME9	Q86XW9	330 aa		13.71	□□□□□ -0.21
TPD52-208	ENST00000518517	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.71	□□□□□ -0.21
TPD52-208	ENST00000518517	CIC	Q96RK0	1608 aa	Predicted RBP	13.71	□□□□□ -0.22
TPD52-208	ENST00000518517	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.71	□□□□□ -0.22
TPD52-208	ENST00000518517	ITGB4	P16144	1822 aa		13.7	□□□□□ -0.22
TPD52-208	ENST00000518517	IP6K1	Q92551	441 aa		13.7	□□□□□ -0.22
TPD52-208	ENST00000518517	KLRG1	Q96E93	195 aa		13.7	□□□□□ -0.22
TPD52-208	ENST00000518517	AK7	Q96M32	723 aa		13.69	□□□□□ -0.22
TPD52-208	ENST00000518517	NSD3	Q9BZ95	1437 aa		13.68	□□□□□ -0.22
TPD52-208	ENST00000518517	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.68	□□□□□ -0.22
TPD52-208	ENST00000518517	RBM46	Q8TBY0	533 aa	Known RBP	13.68	□□□□□ -0.22
TPD52-208	ENST00000518517	KIF13B	Q9NQT8	1826 aa		13.68	□□□□□ -0.22
TPD52-208	ENST00000518517	TOGARAM1	Q9Y4F4	1720 aa		13.67	□□□□□ -0.22
TPD52-208	ENST00000518517	JMY	Q8N9B5	988 aa		13.67	□□□□□ -0.22
TPD52-208	ENST00000518517	TMC1	Q8TDI8	760 aa		13.67	□□□□□ -0.22
TPD52-208	ENST00000518517	PHF14	O94880	888 aa		13.66	□□□□□ -0.22
TPD52-208	ENST00000518517	NMRK2	Q9NPI5	230 aa		13.66	□□□□□ -0.22
TPD52-208	ENST00000518517	PALLD	Q8WX93	1383 aa		13.66	□□□□□ -0.22
TPD52-208	ENST00000518517	AMPH	P49418	695 aa		13.65	□□□□□ -0.22
TPD52-208	ENST00000518517	FSTL1	Q12841	308 aa		13.65	□□□□□ -0.22
TPD52-208	ENST00000518517	ARHGAP27	Q6ZUM4	889 aa		13.65	□□□□□ -0.22
TPD52-208	ENST00000518517	SBNO2	Q9Y2G9	1366 aa		13.65	□□□□□ -0.22
TPD52-208	ENST00000518517	CGNL1	Q0VF96	1302 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	EDC4	Q6P2E9	1401 aa	Known RBP	13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	MEGF6	O75095	1541 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	PKD1L3	Q7Z443	1732 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	SLC34A2	O95436	690 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	HTRA3	P83110	453 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	BCS1L	Q9Y276	419 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	ARFGEF1	Q9Y6D6	1849 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	KIAA1551	Q9HCM1	1747 aa		13.64	□□□□□ -0.23
TPD52-208	ENST00000518517	BRCA1	P38398	1863 aa	Known RBP	13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	MPRIP	Q6WCQ1	1025 aa		13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	RAPGEF4	Q8WZA2	1011 aa		13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	SMARCC1	Q92922	1105 aa	Predicted RBP	13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	TERF2IP	Q9NYB0	399 aa		13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.63	□□□□□ -0.23
TPD52-208	ENST00000518517	CD163L1	Q9NR16	1453 aa		13.62	□□□□□ -0.23
TPD52-208	ENST00000518517	ROCK2	O75116	1388 aa	Known RBP	13.62	□□□□□ -0.23
TPD52-208	ENST00000518517	SSFA2	P28290	1259 aa		13.62	□□□□□ -0.23
TPD52-208	ENST00000518517	PLEKHG2	Q9H7P9	1386 aa		13.61	□□□□□ -0.23
TPD52-208	ENST00000518517	TAT	P17735	454 aa	Predicted RBP	13.61	□□□□□ -0.23
TPD52-208	ENST00000518517	HOXC9	P31274	260 aa		13.61	□□□□□ -0.23
TPD52-208	ENST00000518517	TGFB2	P61812	414 aa		13.61	□□□□□ -0.23
TPD52-208	ENST00000518517	KDM2B	Q8NHM5	1336 aa		13.61	□□□□□ -0.23
TPD52-208	ENST00000518517	FCHSD2	O94868	740 aa		13.6	□□□□□ -0.23
TPD52-208	ENST00000518517	PXDNL	A1KZ92	1463 aa		13.6	□□□□□ -0.23
TPD52-208	ENST00000518517	MAP3K19	Q56UN5	1328 aa		13.6	□□□□□ -0.23
TPD52-208	ENST00000518517	PCDH11X	Q9BZA7	1347 aa		13.6	□□□□□ -0.23
TPD52-208	ENST00000518517	PCDH11Y	Q9BZA8	1340 aa		13.6	□□□□□ -0.23
TPD52-208	ENST00000518517	MAP2	P11137	1827 aa	Known RBP	13.6	□□□□□ -0.23
TPD52-208	ENST00000518517	SMG6	Q86US8	1419 aa	Known RBP	13.59	□□□□□ -0.23
TPD52-208	ENST00000518517	ABCB7	O75027	752 aa		13.59	□□□□□ -0.23
TPD52-208	ENST00000518517	SMIM5	Q71RC9	77 aa		13.59	□□□□□ -0.23
TPD52-208	ENST00000518517	COG3	Q96JB2	828 aa		13.59	□□□□□ -0.23
TPD52-208	ENST00000518517	SLC12A5	Q9H2X9	1139 aa		13.59	□□□□□ -0.23

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