RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 CDC14CA4D256 554 aa6.51□□□□□ -1.37
RNU6-1088P-201ENST00000516850 MYCP01106 439 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1088P-201ENST00000516850 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
RNU6-1088P-201ENST00000516850 PRICKLE2Q7Z3G6 844 aa6.51□□□□□ -1.37
RNU6-1088P-201ENST00000516850 CEP126Q9P2H0 1117 aa6.51□□□□□ -1.37
RNU6-1088P-201ENST00000516850 A0A1W2PRU2 124 aa6.5□□□□□ -1.37
RNU6-1088P-201ENST00000516850 GPC1P35052 558 aa6.5□□□□□ -1.37
RNU6-1088P-201ENST00000516850 RNF144AP50876 292 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1088P-201ENST00000516850 SLFNL1Q499Z3 407 aa6.5□□□□□ -1.37
RNU6-1088P-201ENST00000516850 SLC27A3Q5K4L6 730 aa6.5□□□□□ -1.37
RNU6-1088P-201ENST00000516850 FOXD4L5Q5VV16 416 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1088P-201ENST00000516850 ITGA6P23229 1130 aa6.49□□□□□ -1.37
RNU6-1088P-201ENST00000516850 ABL2P42684 1182 aa6.49□□□□□ -1.37
RNU6-1088P-201ENST00000516850 WASHC4Q2M389 1173 aa6.49□□□□□ -1.37
RNU6-1088P-201ENST00000516850 KDF1Q8NAX2 398 aaPredicted RBP6.49□□□□□ -1.37
RNU6-1088P-201ENST00000516850 NANOS1Q8WY41 292 aaKnown RBP6.49□□□□□ -1.37
RNU6-1088P-201ENST00000516850 GPR37L1O60883 481 aa6.48□□□□□ -1.37
RNU6-1088P-201ENST00000516850 WWC1Q8IX03 1113 aa6.48□□□□□ -1.37
RNU6-1088P-201ENST00000516850 VWA5B2Q8N398 1253 aa6.48□□□□□ -1.37
RNU6-1088P-201ENST00000516850 SIRT1Q96EB6 747 aa6.48□□□□□ -1.37
RNU6-1088P-201ENST00000516850 GDPD2Q9HCC8 539 aa6.48□□□□□ -1.37
RNU6-1088P-201ENST00000516850 RHOQP17081 205 aa6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 GTF2E1P29083 439 aaPredicted RBP6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 SCTRP47872 440 aa6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 VAC14Q08AM6 782 aa6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 USP4Q13107 963 aa6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 CNTNAP3BQ96NU0 1288 aa6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 CNTNAP3Q9BZ76 1288 aa6.47□□□□□ -1.37
RNU6-1088P-201ENST00000516850 GNRH1P01148 92 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 SEMA3FQ13275 785 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 CLN3Q13286 438 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 FOXR1Q6PIV2 292 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 RNF135Q8IUD6 432 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 GPR161Q8N6U8 529 aaKnown RBP6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 COL25A1Q9BXS0 654 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 OSBPL3Q9H4L5 887 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 ARHGEF10LQ9HCE6 1279 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 DOLKQ9UPQ8 538 aa6.46□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TRAK2O60296 914 aa6.45□□□□□ -1.38
RNU6-1088P-201ENST00000516850 IRF5Q13568 498 aa6.45□□□□□ -1.38
RNU6-1088P-201ENST00000516850 RIPOR1Q6ZS17 1223 aa6.45□□□□□ -1.38
RNU6-1088P-201ENST00000516850 GMCL1Q96IK5 515 aa6.45□□□□□ -1.38
RNU6-1088P-201ENST00000516850 CCDC85AQ96PX6 553 aaPredicted RBP6.45□□□□□ -1.38
RNU6-1088P-201ENST00000516850 SENP3-EIF4A1A0A087X0R7 540 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 H7C1W4 665 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 RAD21O60216 631 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 SOX11P35716 441 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 POU4F2Q12837 409 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 MCM6Q14566 821 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 ESCO1Q5FWF5 840 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 CNKSR1Q969H4 720 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 GAS2L1Q99501 681 aaPredicted RBP6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 CDCA7Q9BWT1 371 aaPredicted RBP6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 RAB6BQ9NRW1 208 aa6.44□□□□□ -1.38
RNU6-1088P-201ENST00000516850 OXLD1Q5BKU9 147 aa6.43□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TAS1R3Q7RTX0 852 aa6.43□□□□□ -1.38
RNU6-1088P-201ENST00000516850 ZSCAN10Q96SZ4 725 aaPredicted RBP6.43□□□□□ -1.38
RNU6-1088P-201ENST00000516850 ESYT1Q9BSJ8 1104 aa6.43□□□□□ -1.38
RNU6-1088P-201ENST00000516850 GRIP2Q9C0E4 1043 aa6.43□□□□□ -1.38
RNU6-1088P-201ENST00000516850 DYRK1BQ9Y463 629 aa6.43□□□□□ -1.38
RNU6-1088P-201ENST00000516850 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
RNU6-1088P-201ENST00000516850 CENPCQ03188 943 aa6.42□□□□□ -1.38
RNU6-1088P-201ENST00000516850 MAP7D1Q3KQU3 841 aa6.42□□□□□ -1.38
RNU6-1088P-201ENST00000516850 WDR44Q5JSH3 913 aa6.42□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TIMMDC1Q9NPL8 285 aa6.42□□□□□ -1.38
RNU6-1088P-201ENST00000516850 SPATA31C2B4DYI2 1134 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 WASLO00401 505 aaPredicted RBP6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 FLIIQ13045 1269 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 GNASQ5JWF2 1037 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TMEM214Q6NUQ4 689 aaKnown RBP6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 NBPF10Q6P3W6 841 aaKnown RBP6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TRIM22Q8IYM9 498 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 PHTF2Q8N3S3 785 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 NBPF15Q8N660 670 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TRERF1Q96PN7 1200 aa6.41□□□□□ -1.38
RNU6-1088P-201ENST00000516850 KRT76Q01546 638 aa6.4□□□□□ -1.38
RNU6-1088P-201ENST00000516850 TSGA10IPQ3SY00 556 aa6.4□□□□□ -1.38
RNU6-1088P-201ENST00000516850 SVOPQ8N4V2 548 aa6.4□□□□□ -1.38
RNU6-1088P-201ENST00000516850 XAGE2Q96GT9 111 aa6.4□□□□□ -1.38
RNU6-1088P-201ENST00000516850 COG6Q9Y2V7 657 aa6.4□□□□□ -1.38
RNU6-1088P-201ENST00000516850 IL2RAP01589 272 aa6.39□□□□□ -1.39
RNU6-1088P-201ENST00000516850 F11P03951 625 aa6.39□□□□□ -1.39
RNU6-1088P-201ENST00000516850 UBTFP17480 764 aaKnown RBP6.39□□□□□ -1.39
RNU6-1088P-201ENST00000516850 RNFT1Q5M7Z0 435 aa6.39□□□□□ -1.39
RNU6-1088P-201ENST00000516850 PLPP7Q8NBV4 271 aa6.39□□□□□ -1.39
RNU6-1088P-201ENST00000516850 PHKA2P46019 1235 aa6.38□□□□□ -1.39
RNU6-1088P-201ENST00000516850 DBN1Q16643 649 aa6.38□□□□□ -1.39
RNU6-1088P-201ENST00000516850 ZNF837Q96EG3 531 aaPredicted RBP6.38□□□□□ -1.39
RNU6-1088P-201ENST00000516850 CUEDC1Q9NWM3 386 aaPredicted RBP6.38□□□□□ -1.39
RNU6-1088P-201ENST00000516850 A0A1B0GTH6 734 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 CSB-PGBD3P0DP91 1061 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 MAP3K10Q02779 954 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 SRSF11Q05519 484 aaKnown RBP6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 TLR1Q15399 786 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 PGBD3Q8N328 593 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 GTPBP3Q969Y2 492 aaKnown RBP6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 NUCKS1Q9H1E3 243 aaKnown RBP6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 MBIPQ9NS73 344 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 CHIC2Q9UKJ5 165 aa6.37□□□□□ -1.39
RNU6-1088P-201ENST00000516850 NSFL1CQ9UNZ2 370 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms