RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 KNSTRNQ9Y448 316 aa8.22□□□□□ -1.09
SCARNA18.1-201ENST00000516330 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.09
SCARNA18.1-201ENST00000516330 ZNF831Q5JPB2 1677 aa8.21□□□□□ -1.09
SCARNA18.1-201ENST00000516330 TATP17735 454 aaPredicted RBP8.21□□□□□ -1.1
SCARNA18.1-201ENST00000516330 PANK3Q9H999 370 aa8.21□□□□□ -1.1
SCARNA18.1-201ENST00000516330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCARNA18.1-201ENST00000516330 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.1
SCARNA18.1-201ENST00000516330 IGSF1Q8N6C5 1336 aa8.21□□□□□ -1.1
SCARNA18.1-201ENST00000516330 KDRP35968 1356 aa8.21□□□□□ -1.1
SCARNA18.1-201ENST00000516330 HSP90AB2PQ58FF8 381 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 NBPF6Q5VWK0 638 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 ZCRB1Q8TBF4 217 aaKnown RBP8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 NBPF4Q96M43 638 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 POLR3GLQ9BT43 218 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 POLKQ9UBT6 870 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 C5P01031 1676 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 SRCAPQ6ZRS2 3230 aa8.2□□□□□ -1.1
SCARNA18.1-201ENST00000516330 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
SCARNA18.1-201ENST00000516330 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
SCARNA18.1-201ENST00000516330 LTV1Q96GA3 475 aaPredicted RBP8.19□□□□□ -1.1
SCARNA18.1-201ENST00000516330 COL24A1Q17RW2 1714 aa8.18□□□□□ -1.1
SCARNA18.1-201ENST00000516330 ITGB4P16144 1822 aa8.18□□□□□ -1.1
SCARNA18.1-201ENST00000516330 MORC1Q86VD1 984 aa8.18□□□□□ -1.1
SCARNA18.1-201ENST00000516330 ADAMTS7Q9UKP4 1686 aa8.18□□□□□ -1.1
SCARNA18.1-201ENST00000516330 FBLN1P23142 703 aa8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 EIF4A2Q14240 407 aaKnown RBP8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 R3HDM1Q15032 1099 aaKnown RBP8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 TXNRD1Q16881 649 aa8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 COL3A1P02461 1466 aaPredicted RBP8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 MRC1P22897 1456 aa8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 TAF1LQ8IZX4 1826 aa8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 TUBGCP6Q96RT7 1819 aa8.17□□□□□ -1.1
SCARNA18.1-201ENST00000516330 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
SCARNA18.1-201ENST00000516330 PER1O15534 1290 aaPredicted RBP8.16□□□□□ -1.1
SCARNA18.1-201ENST00000516330 HSP90AB1P08238 724 aaKnown RBP8.16□□□□□ -1.1
SCARNA18.1-201ENST00000516330 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
SCARNA18.1-201ENST00000516330 ANO8Q9HCE9 1232 aaPredicted RBP8.16□□□□□ -1.1
SCARNA18.1-201ENST00000516330 C4BP0C0L5 1744 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 PSDA5PKW4 1024 aaPredicted RBP8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 KCNQ2O43526 872 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 AMOTQ4VCS5 1084 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 USHBP1Q8N6Y0 703 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 DDX54Q8TDD1 881 aaKnown RBP8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 ACSBG1Q96GR2 724 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 EYA1Q99502 592 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 STK32BQ9NY57 414 aa8.15□□□□□ -1.1
SCARNA18.1-201ENST00000516330 SCN11AQ9UI33 1791 aa8.15□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PALLDQ8WX93 1383 aa8.14□□□□□ -1.11
SCARNA18.1-201ENST00000516330 CYP27B1O15528 508 aa8.14□□□□□ -1.11
SCARNA18.1-201ENST00000516330 SLC15A2Q16348 729 aa8.14□□□□□ -1.11
SCARNA18.1-201ENST00000516330 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
SCARNA18.1-201ENST00000516330 COL5A3P25940 1745 aaPredicted RBP8.14□□□□□ -1.11
SCARNA18.1-201ENST00000516330 MAP3K5Q99683 1374 aa8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PHKG2P15735 406 aa8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PTF1AQ7RTS3 328 aa8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PROM2Q8N271 834 aa8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 SYTL4Q96C24 671 aaPredicted RBP8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 SPON1Q9HCB6 807 aa8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
SCARNA18.1-201ENST00000516330 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
SCARNA18.1-201ENST00000516330 TNNT2P45379 298 aaPredicted RBP8.12□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
SCARNA18.1-201ENST00000516330 DCAF5Q96JK2 942 aa8.12□□□□□ -1.11
SCARNA18.1-201ENST00000516330 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
SCARNA18.1-201ENST00000516330 UBR3Q6ZT12 1888 aa8.12□□□□□ -1.11
SCARNA18.1-201ENST00000516330 IL13P35225 146 aa8.11□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PLEKHO1Q53GL0 409 aaPredicted RBP8.11□□□□□ -1.11
SCARNA18.1-201ENST00000516330 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
SCARNA18.1-201ENST00000516330 UBR2Q8IWV8 1755 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 ERVV-2B6SEH9 535 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 MTHFSP49914 203 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 C1orf141Q5JVX7 400 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 FLAD1Q8NFF5 587 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 AKT1S1Q96B36 256 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 KAT6BQ8WYB5 2073 aa8.1□□□□□ -1.11
SCARNA18.1-201ENST00000516330 TJP1Q07157 1748 aa8.09□□□□□ -1.11
SCARNA18.1-201ENST00000516330 DIAPH1O60610 1272 aaKnown RBP8.09□□□□□ -1.11
SCARNA18.1-201ENST00000516330 ZNF827Q17R98 1081 aa8.09□□□□□ -1.11
SCARNA18.1-201ENST00000516330 CFAP53Q96M91 514 aa8.09□□□□□ -1.11
SCARNA18.1-201ENST00000516330 SIPA1L3O60292 1781 aaPredicted RBP8.09□□□□□ -1.11
SCARNA18.1-201ENST00000516330 PNPLA7Q6ZV29 1317 aa8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 CC2D1BQ5T0F9 858 aaKnown RBP8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 SULT6B1Q6IMI4 303 aa8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 ZNF530Q6P9A1 599 aaPredicted RBP8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 PPP1R1BQ9UD71 204 aaPredicted RBP8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 C4AP0C0L4 1744 aa8.08□□□□□ -1.12
SCARNA18.1-201ENST00000516330 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
SCARNA18.1-201ENST00000516330 SSFA2P28290 1259 aa8.07□□□□□ -1.12
SCARNA18.1-201ENST00000516330 SIK1P57059 783 aa8.07□□□□□ -1.12
SCARNA18.1-201ENST00000516330 PIGBQ92521 554 aa8.07□□□□□ -1.12
SCARNA18.1-201ENST00000516330 SGIP1Q9BQI5 828 aa8.07□□□□□ -1.12
SCARNA18.1-201ENST00000516330 CNTNAP4Q9C0A0 1308 aa8.06□□□□□ -1.12
SCARNA18.1-201ENST00000516330 PTGER2P43116 358 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms