RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 NOP53Q9NZM5 478 aaKnown RBP3.52□□□□□ -1.85
SCARNA23-201ENST00000516060 GDF2Q9UK05 429 aaPredicted RBP3.52□□□□□ -1.85
SCARNA23-201ENST00000516060 AMPD1P23109 780 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 DHX9Q08211 1270 aaKnown RBP3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 MAP2K5Q13163 448 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 FZD5Q13467 585 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 ERFEQ4G0M1 354 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 ARMC2Q8NEN0 867 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 FMNL2Q96PY5 1086 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 KCTD15Q96SI1 283 aaPredicted RBP3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 DYRK1BQ9Y463 629 aa3.51□□□□□ -1.85
SCARNA23-201ENST00000516060 IRF6O14896 467 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 PER1O15534 1290 aaPredicted RBP3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 CLCN1P35523 988 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 PTGIRP43119 386 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 DGKGP49619 791 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 RNF144AP50876 292 aaPredicted RBP3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 LAMC2Q13753 1193 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 GIGYF2Q6Y7W6 1299 aaKnown RBP3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 GOLGA6L1Q8N7Z2 621 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 BTBD6Q96KE9 485 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 CARD14Q9BXL6 1004 aa3.5□□□□□ -1.85
SCARNA23-201ENST00000516060 PAX4O43316 350 aa3.49□□□□□ -1.85
SCARNA23-201ENST00000516060 ADH1AP07327 375 aa3.49□□□□□ -1.85
SCARNA23-201ENST00000516060 NBPF14Q5TI25 921 aa3.49□□□□□ -1.85
SCARNA23-201ENST00000516060 GAS2L1Q99501 681 aaPredicted RBP3.49□□□□□ -1.85
SCARNA23-201ENST00000516060 CFHR5Q9BXR6 569 aa3.49□□□□□ -1.85
SCARNA23-201ENST00000516060 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
SCARNA23-201ENST00000516060 COL17A1Q9UMD9 1497 aaPredicted RBP3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 LILRA1O75019 489 aa3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 ADD1P35611 737 aaKnown RBP3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 INTS6LQ5JSJ4 861 aaKnown RBP3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 SLCO4C1Q6ZQN7 724 aa3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 GPIHBP1Q8IV16 184 aa3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 NUCKS1Q9H1E3 243 aaKnown RBP3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 TMPRSS4Q9NRS4 437 aa3.48□□□□□ -1.85
SCARNA23-201ENST00000516060 THBS1P07996 1170 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 EPXP11678 715 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 RIC3Q7Z5B4 369 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 P3H3Q8IVL6 736 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 ZNF784Q8NCA9 323 aaPredicted RBP3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 GGA1Q9UJY5 639 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 CDV3Q9UKY7 258 aaKnown RBP3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 PCDHB15Q9Y5E8 787 aa3.47□□□□□ -1.85
SCARNA23-201ENST00000516060 C2CD2LO14523 706 aa3.46□□□□□ -1.86
SCARNA23-201ENST00000516060 SPATA31C1P0DKV0 1188 aa3.46□□□□□ -1.86
SCARNA23-201ENST00000516060 HRCP23327 699 aa3.46□□□□□ -1.86
SCARNA23-201ENST00000516060 GJA5P36382 358 aa3.46□□□□□ -1.86
SCARNA23-201ENST00000516060 POU4F2Q12837 409 aa3.46□□□□□ -1.86
SCARNA23-201ENST00000516060 MINK1Q8N4C8 1332 aaPredicted RBP3.45□□□□□ -1.86
SCARNA23-201ENST00000516060 SSTR3P32745 418 aaPredicted RBP3.45□□□□□ -1.86
SCARNA23-201ENST00000516060 GPKOWQ92917 476 aaPredicted RBP eCLIP3.45□□□□□ -1.86
SCARNA23-201ENST00000516060 SLC10A4Q96EP9 437 aa3.45□□□□□ -1.86
SCARNA23-201ENST00000516060 TRIM11Q96F44 468 aa3.45□□□□□ -1.86
SCARNA23-201ENST00000516060 F11P03951 625 aa3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 GPC1P35052 558 aa3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 UBAP2LQ14157 1087 aaKnown RBP3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 RSBN1LQ6PCB5 846 aaPredicted RBP3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 CCDC102AQ96A19 550 aa3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 PLVAPQ9BX97 442 aa3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 ZBTB3Q9H5J0 574 aa3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 PHF24Q9UPV7 400 aa3.44□□□□□ -1.86
SCARNA23-201ENST00000516060 BMP4P12644 408 aa3.43□□□□□ -1.86
SCARNA23-201ENST00000516060 NBPF10Q6P3W6 841 aaKnown RBP3.43□□□□□ -1.86
SCARNA23-201ENST00000516060 CHSY3Q70JA7 882 aa3.43□□□□□ -1.86
SCARNA23-201ENST00000516060 RNF135Q8IUD6 432 aa3.43□□□□□ -1.86
SCARNA23-201ENST00000516060 NBPF15Q8N660 670 aa3.43□□□□□ -1.86
SCARNA23-201ENST00000516060 TSHZ2Q9NRE2 1034 aa3.43□□□□□ -1.86
SCARNA23-201ENST00000516060 ERVH48-1M5A8F1 160 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 H2AFB1P0C5Y9 115 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 H2AFB2P0C5Z0 115 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 WDR44Q5JSH3 913 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 PDXDC2PQ6P474 469 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 KRI1Q8N9T8 703 aaKnown RBP3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 CABLES1Q8TDN4 633 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 ARHGAP9Q9BRR9 750 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 TIMMDC1Q9NPL8 285 aa3.42□□□□□ -1.86
SCARNA23-201ENST00000516060 NEURL1BA8MQ27 555 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 SPATA31C2B4DYI2 1134 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 MEN1O00255 615 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 ARAFP10398 606 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 ELNP15502 786 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 CTBSQ01459 385 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 GRIP2Q9C0E4 1043 aa3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 ATXN7L1Q9ULK2 861 aaPredicted RBP3.41□□□□□ -1.86
SCARNA23-201ENST00000516060 A0A1W2PRU2 124 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 APBA3O96018 575 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 RAB15P59190 212 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 SLC27A3Q5K4L6 730 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 ZBTB33Q86T24 672 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 TSC1Q92574 1164 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 OCSTAMPQ9BR26 566 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 TBC1D2Q9BYX2 928 aa3.4□□□□□ -1.87
SCARNA23-201ENST00000516060 ATP5J2-PTCD1G3V325 749 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 FGFR3P22607 806 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 ABHD17AQ96GS6 310 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 GPAMQ9HCL2 828 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms