RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRIX1-205ENST00000515798 SRLQ86TD4 932 aa12.86□□□□□ -0.35
BRIX1-205ENST00000515798 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
BRIX1-205ENST00000515798 GSCP56915 257 aaPredicted RBP12.85□□□□□ -0.35
BRIX1-205ENST00000515798 GPS2Q13227 327 aa12.85□□□□□ -0.35
BRIX1-205ENST00000515798 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
BRIX1-205ENST00000515798 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
BRIX1-205ENST00000515798 SWT1Q5T5J6 900 aaKnown RBP12.85□□□□□ -0.35
BRIX1-205ENST00000515798 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
BRIX1-205ENST00000515798 TMX1Q9H3N1 280 aa12.85□□□□□ -0.35
BRIX1-205ENST00000515798 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
BRIX1-205ENST00000515798 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
BRIX1-205ENST00000515798 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
BRIX1-205ENST00000515798 MX1P20591 662 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 MED4Q9NPJ6 270 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 MYOM1P52179 1685 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 TRIM66O15016 1216 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 MCCP23508 829 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 GYS2P54840 703 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 SUGP1Q8IWZ8 645 aaKnown RBP12.84□□□□□ -0.35
BRIX1-205ENST00000515798 C16orf45Q96MC5 204 aaPredicted RBP12.84□□□□□ -0.35
BRIX1-205ENST00000515798 ZBTB40Q9NUA8 1239 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
BRIX1-205ENST00000515798 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
BRIX1-205ENST00000515798 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 ZSCAN26Q16670 478 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 GOLGA5Q8TBA6 731 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 USP26Q9BXU7 913 aa12.83□□□□□ -0.36
BRIX1-205ENST00000515798 ZNF215Q9UL58 517 aaPredicted RBP12.83□□□□□ -0.36
BRIX1-205ENST00000515798 WDR62O43379 1518 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 AP5Z1O43299 807 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 ATP8B1O43520 1251 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 EP400NLQ6ZTU2 488 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 TICAM2Q86XR7 235 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 NEK11Q8NG66 645 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 CXorf56Q9H5V9 222 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 PSD3Q9NYI0 1048 aa12.82□□□□□ -0.36
BRIX1-205ENST00000515798 RRP15Q9Y3B9 282 aaKnown RBP12.82□□□□□ -0.36
BRIX1-205ENST00000515798 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
BRIX1-205ENST00000515798 PTGS1P23219 599 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 MAGEA9P43362 315 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
BRIX1-205ENST00000515798 BCL2L13Q9BXK5 485 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 RAI14Q9P0K7 980 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 ERBB3P21860 1342 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 SLU7O95391 586 aaKnown RBP12.81□□□□□ -0.36
BRIX1-205ENST00000515798 ELF2Q15723 593 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 CHAMP1Q96JM3 812 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 CDK13Q14004 1512 aaKnown RBP12.81□□□□□ -0.36
BRIX1-205ENST00000515798 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
BRIX1-205ENST00000515798 PPRC1Q5VV67 1664 aaKnown RBP12.81□□□□□ -0.36
BRIX1-205ENST00000515798 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
BRIX1-205ENST00000515798 MCM2P49736 904 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.8□□□□□ -0.36
BRIX1-205ENST00000515798 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 TRIM27P14373 513 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 CUL4AQ13619 759 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
BRIX1-205ENST00000515798 RPAINQ86UA6 219 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
BRIX1-205ENST00000515798 INTS4Q96HW7 963 aaKnown RBP12.8□□□□□ -0.36
BRIX1-205ENST00000515798 A2MP01023 1474 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 GADD45BO75293 160 aaPredicted RBP12.79□□□□□ -0.36
BRIX1-205ENST00000515798 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 SPC24Q8NBT2 197 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 GTF3C6Q969F1 213 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 DRC1Q96MC2 740 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 NUP155O75694 1391 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRIX1-205ENST00000515798 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRIX1-205ENST00000515798 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
BRIX1-205ENST00000515798 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
BRIX1-205ENST00000515798 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
BRIX1-205ENST00000515798 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
BRIX1-205ENST00000515798 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
BRIX1-205ENST00000515798 ELP1O95163 1332 aa12.78□□□□□ -0.36
BRIX1-205ENST00000515798 MED14O60244 1454 aa12.77□□□□□ -0.36
BRIX1-205ENST00000515798 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.36
BRIX1-205ENST00000515798 CPP00450 1065 aa12.77□□□□□ -0.36
BRIX1-205ENST00000515798 MCTP2Q6DN12 878 aa12.77□□□□□ -0.36
BRIX1-205ENST00000515798 ZSCAN25Q6NSZ9 544 aa12.77□□□□□ -0.36
BRIX1-205ENST00000515798 SMARCE1Q969G3 411 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms