RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 PDE3BQ13370 1112 aa25.71■■□□□ 1.71
SMN1-209ENST00000514951 SHANK3Q9BYB0 1731 aa25.71■■□□□ 1.71
SMN1-209ENST00000514951 DDB1Q16531 1140 aa25.7■■□□□ 1.71
SMN1-209ENST00000514951 SULT6B1Q6IMI4 303 aa25.69■■□□□ 1.7
SMN1-209ENST00000514951 RAPGEF4Q8WZA2 1011 aa25.69■■□□□ 1.7
SMN1-209ENST00000514951 PKD1L3Q7Z443 1732 aa25.69■■□□□ 1.7
SMN1-209ENST00000514951 EXOC5O00471 708 aa25.67■■□□□ 1.7
SMN1-209ENST00000514951 U2SURPO15042 1029 aaKnown RBP25.67■■□□□ 1.7
SMN1-209ENST00000514951 TATP17735 454 aaPredicted RBP25.67■■□□□ 1.7
SMN1-209ENST00000514951 EN1Q05925 392 aaPredicted RBP25.67■■□□□ 1.7
SMN1-209ENST00000514951 FAM196AQ6ZSG2 479 aa25.67■■□□□ 1.7
SMN1-209ENST00000514951 TNS1Q9HBL0 1735 aaKnown RBP25.67■■□□□ 1.7
SMN1-209ENST00000514951 TRIM37O94972 964 aa25.66■■□□□ 1.7
SMN1-209ENST00000514951 HMOX1P09601 288 aa25.65■■□□□ 1.7
SMN1-209ENST00000514951 NUDCQ9Y266 331 aa25.65■■□□□ 1.7
SMN1-209ENST00000514951 PLEKHG2Q9H7P9 1386 aa25.64■■□□□ 1.69
SMN1-209ENST00000514951 MARCH10Q8NA82 808 aaPredicted RBP25.63■■□□□ 1.69
SMN1-209ENST00000514951 ZCRB1Q8TBF4 217 aaKnown RBP25.63■■□□□ 1.69
SMN1-209ENST00000514951 CCDC184Q52MB2 194 aa25.62■■□□□ 1.69
SMN1-209ENST00000514951 PSDA5PKW4 1024 aaPredicted RBP25.61■■□□□ 1.69
SMN1-209ENST00000514951 U2AF1L5P0DN76 240 aaPredicted RBP25.61■■□□□ 1.69
SMN1-209ENST00000514951 U2AF1Q01081 240 aaKnown RBP eCLIP25.61■■□□□ 1.69
SMN1-209ENST00000514951 DIEXFQ68CQ4 756 aaKnown RBP25.61■■□□□ 1.69
SMN1-209ENST00000514951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.6■■□□□ 1.69
SMN1-209ENST00000514951 APBA3O96018 575 aa25.59■■□□□ 1.69
SMN1-209ENST00000514951 EZH2Q15910 746 aaKnown RBP25.59■■□□□ 1.69
SMN1-209ENST00000514951 RSPH6AQ9H0K4 717 aa25.59■■□□□ 1.69
SMN1-209ENST00000514951 DDX54Q8TDD1 881 aaKnown RBP25.58■■□□□ 1.69
SMN1-209ENST00000514951 SPG7Q9UQ90 795 aa25.57■■□□□ 1.68
SMN1-209ENST00000514951 PCDH11XQ9BZA7 1347 aa25.57■■□□□ 1.68
SMN1-209ENST00000514951 PCDH11YQ9BZA8 1340 aa25.57■■□□□ 1.68
SMN1-209ENST00000514951 SBF2Q86WG5 1849 aa25.56■■□□□ 1.68
SMN1-209ENST00000514951 CYP27B1O15528 508 aa25.56■■□□□ 1.68
SMN1-209ENST00000514951 BCL9O00512 1426 aa25.55■■□□□ 1.68
SMN1-209ENST00000514951 FCHSD2O94868 740 aa25.55■■□□□ 1.68
SMN1-209ENST00000514951 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
SMN1-209ENST00000514951 AMOTQ4VCS5 1084 aa25.54■■□□□ 1.68
SMN1-209ENST00000514951 PLEKHO1Q53GL0 409 aaPredicted RBP25.54■■□□□ 1.68
SMN1-209ENST00000514951 PHACTR3Q96KR7 559 aa25.51■■□□□ 1.67
SMN1-209ENST00000514951 CAMKK2Q96RR4 588 aa25.51■■□□□ 1.67
SMN1-209ENST00000514951 MRS2Q9HD23 443 aa25.51■■□□□ 1.67
SMN1-209ENST00000514951 DOT1LQ8TEK3 1739 aa25.51■■□□□ 1.67
SMN1-209ENST00000514951 SRCAPQ6ZRS2 3230 aa25.5■■□□□ 1.67
SMN1-209ENST00000514951 PHKG2P15735 406 aa25.5■■□□□ 1.67
SMN1-209ENST00000514951 R3HDM1Q15032 1099 aaKnown RBP25.5■■□□□ 1.67
SMN1-209ENST00000514951 ZNF530Q6P9A1 599 aaPredicted RBP25.5■■□□□ 1.67
SMN1-209ENST00000514951 TOGARAM1Q9Y4F4 1720 aa25.5■■□□□ 1.67
SMN1-209ENST00000514951 WDR43Q15061 677 aaKnown RBP eCLIP25.49■■□□□ 1.67
SMN1-209ENST00000514951 MTHFSDQ2M296 383 aaKnown RBP25.49■■□□□ 1.67
SMN1-209ENST00000514951 NHSQ6T4R5 1651 aa25.48■■□□□ 1.67
SMN1-209ENST00000514951 NKX1-1Q15270 411 aaPredicted RBP25.48■■□□□ 1.67
SMN1-209ENST00000514951 IFNL2Q8IZJ0 200 aa25.48■■□□□ 1.67
SMN1-209ENST00000514951 PLEKHF1Q96S99 279 aa25.48■■□□□ 1.67
SMN1-209ENST00000514951 ADAMTS8Q9UP79 889 aa25.48■■□□□ 1.67
SMN1-209ENST00000514951 KAT6BQ8WYB5 2073 aa25.48■■□□□ 1.67
SMN1-209ENST00000514951 PNISRQ8TF01 805 aaKnown RBP25.46■■□□□ 1.67
SMN1-209ENST00000514951 RREB1Q92766 1687 aa25.46■■□□□ 1.67
SMN1-209ENST00000514951 LRP5O75197 1615 aa25.44■■□□□ 1.66
SMN1-209ENST00000514951 PTF1AQ7RTS3 328 aa25.44■■□□□ 1.66
SMN1-209ENST00000514951 ACSBG1Q96GR2 724 aa25.44■■□□□ 1.66
SMN1-209ENST00000514951 VIRMAQ69YN4 1812 aaKnown RBP25.44■■□□□ 1.66
SMN1-209ENST00000514951 NUP188Q5SRE5 1749 aa25.43■■□□□ 1.66
SMN1-209ENST00000514951 KDM6AO15550 1401 aaPredicted RBP25.43■■□□□ 1.66
SMN1-209ENST00000514951 ITGB4P16144 1822 aa25.43■■□□□ 1.66
SMN1-209ENST00000514951 KCNQ2O43526 872 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 AKAP4Q5JQC9 854 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 MIER1Q8N108 512 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 GAS2L2Q8NHY3 880 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 SCN11AQ9UI33 1791 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
SMN1-209ENST00000514951 PNNQ9H307 717 aaKnown RBP25.41■■□□□ 1.66
SMN1-209ENST00000514951 DLG5Q8TDM6 1919 aa25.4■■□□□ 1.66
SMN1-209ENST00000514951 NBPF14Q5TI25 921 aa25.4■■□□□ 1.66
SMN1-209ENST00000514951 CCDC146Q8IYE0 955 aa25.4■■□□□ 1.66
SMN1-209ENST00000514951 BTAF1O14981 1849 aa25.4■■□□□ 1.66
SMN1-209ENST00000514951 CCER2I3L3R5 266 aa25.39■■□□□ 1.66
SMN1-209ENST00000514951 HSP90AB1P08238 724 aaKnown RBP25.39■■□□□ 1.66
SMN1-209ENST00000514951 PRIM1P49642 420 aaKnown RBP25.39■■□□□ 1.66
SMN1-209ENST00000514951 DCAF5Q96JK2 942 aa25.39■■□□□ 1.66
SMN1-209ENST00000514951 BCL11BQ9C0K0 894 aaPredicted RBP25.39■■□□□ 1.66
SMN1-209ENST00000514951 MAP3K5Q99683 1374 aa25.39■■□□□ 1.65
SMN1-209ENST00000514951 MPRIPQ6WCQ1 1025 aa25.38■■□□□ 1.65
SMN1-209ENST00000514951 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
SMN1-209ENST00000514951 NEFMP07197 916 aa25.37■■□□□ 1.65
SMN1-209ENST00000514951 RUNDC1Q96C34 613 aa25.37■■□□□ 1.65
SMN1-209ENST00000514951 GNAT3A8MTJ3 354 aa25.36■■□□□ 1.65
SMN1-209ENST00000514951 SYTL4Q96C24 671 aaPredicted RBP25.36■■□□□ 1.65
SMN1-209ENST00000514951 LGR6Q9HBX8 967 aa25.36■■□□□ 1.65
SMN1-209ENST00000514951 NFE2L2Q16236 605 aa25.35■■□□□ 1.65
SMN1-209ENST00000514951 RGPD3A6NKT7 1758 aaPredicted RBP25.34■■□□□ 1.65
SMN1-209ENST00000514951 RGPD4Q7Z3J3 1758 aa25.34■■□□□ 1.65
SMN1-209ENST00000514951 RNMTO43148 476 aaKnown RBP25.34■■□□□ 1.65
SMN1-209ENST00000514951 MRC1P22897 1456 aa25.33■■□□□ 1.65
SMN1-209ENST00000514951 ERVV-2B6SEH9 535 aa25.33■■□□□ 1.64
SMN1-209ENST00000514951 IL17REQ8NFR9 667 aa25.32■■□□□ 1.64
SMN1-209ENST00000514951 FAM9BQ8IZU0 186 aa25.31■■□□□ 1.64
SMN1-209ENST00000514951 PIGBQ92521 554 aa25.31■■□□□ 1.64
SMN1-209ENST00000514951 SIPA1L3O60292 1781 aaPredicted RBP25.3■■□□□ 1.64
SMN1-209ENST00000514951 PLSCR1O15162 318 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms