RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 DEFB132Q7Z7B7 95 aa16.77■□□□□ 0.28
COPB2-212ENST00000514508 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
COPB2-212ENST00000514508 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
COPB2-212ENST00000514508 APBA3O96018 575 aa16.75■□□□□ 0.27
COPB2-212ENST00000514508 IL13P35225 146 aa16.75■□□□□ 0.27
COPB2-212ENST00000514508 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
COPB2-212ENST00000514508 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
COPB2-212ENST00000514508 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
COPB2-212ENST00000514508 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
COPB2-212ENST00000514508 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
COPB2-212ENST00000514508 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
COPB2-212ENST00000514508 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
COPB2-212ENST00000514508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.276e-10■■■■□ 19.5
COPB2-212ENST00000514508 PPP2R1AP30153 589 aa16.72■□□□□ 0.27
COPB2-212ENST00000514508 SPG7Q9UQ90 795 aa16.72■□□□□ 0.27
COPB2-212ENST00000514508 PARD3Q8TEW0 1356 aa16.72■□□□□ 0.27
COPB2-212ENST00000514508 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
COPB2-212ENST00000514508 KDRP35968 1356 aa16.71■□□□□ 0.27
COPB2-212ENST00000514508 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.27
COPB2-212ENST00000514508 RGPD3A6NKT7 1758 aaPredicted RBP16.71■□□□□ 0.27
COPB2-212ENST00000514508 RGPD4Q7Z3J3 1758 aa16.71■□□□□ 0.27
COPB2-212ENST00000514508 SULT6B1Q6IMI4 303 aa16.7■□□□□ 0.26
COPB2-212ENST00000514508 ACSBG1Q96GR2 724 aa16.7■□□□□ 0.26
COPB2-212ENST00000514508 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
COPB2-212ENST00000514508 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
COPB2-212ENST00000514508 PLSCR1O15162 318 aa16.69■□□□□ 0.26
COPB2-212ENST00000514508 KCNQ2O43526 872 aa16.69■□□□□ 0.26
COPB2-212ENST00000514508 PTF1AQ7RTS3 328 aa16.69■□□□□ 0.26
COPB2-212ENST00000514508 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
COPB2-212ENST00000514508 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
COPB2-212ENST00000514508 BTAF1O14981 1849 aa16.68■□□□□ 0.26
COPB2-212ENST00000514508 CYP27B1O15528 508 aa16.68■□□□□ 0.26
COPB2-212ENST00000514508 RALBP1Q15311 655 aa16.68■□□□□ 0.26
COPB2-212ENST00000514508 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
COPB2-212ENST00000514508 PLEKHO1Q53GL0 409 aaPredicted RBP16.68■□□□□ 0.26
COPB2-212ENST00000514508 RREB1Q92766 1687 aa16.67■□□□□ 0.26
COPB2-212ENST00000514508 AMOTQ4VCS5 1084 aa16.67■□□□□ 0.26
COPB2-212ENST00000514508 IFNL2Q8IZJ0 200 aa16.67■□□□□ 0.26
COPB2-212ENST00000514508 NKX1-1Q15270 411 aaPredicted RBP16.66■□□□□ 0.26
COPB2-212ENST00000514508 PHKG2P15735 406 aa16.65■□□□□ 0.26
COPB2-212ENST00000514508 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
COPB2-212ENST00000514508 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
COPB2-212ENST00000514508 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
COPB2-212ENST00000514508 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
COPB2-212ENST00000514508 HMOX1P09601 288 aa16.64■□□□□ 0.25
COPB2-212ENST00000514508 ITGB4P16144 1822 aa16.63■□□□□ 0.25
COPB2-212ENST00000514508 NUP188Q5SRE5 1749 aa16.63■□□□□ 0.25
COPB2-212ENST00000514508 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
COPB2-212ENST00000514508 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
COPB2-212ENST00000514508 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
COPB2-212ENST00000514508 TXNRD1Q16881 649 aa16.6■□□□□ 0.25
COPB2-212ENST00000514508 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
COPB2-212ENST00000514508 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
COPB2-212ENST00000514508 NBPF14Q5TI25 921 aa16.59■□□□□ 0.25
COPB2-212ENST00000514508 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
COPB2-212ENST00000514508 PROM2Q8N271 834 aa16.59■□□□□ 0.25
COPB2-212ENST00000514508 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
COPB2-212ENST00000514508 LY75O60449 1722 aa16.59■□□□□ 0.25
COPB2-212ENST00000514508 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
COPB2-212ENST00000514508 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
COPB2-212ENST00000514508 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
COPB2-212ENST00000514508 ERVV-2B6SEH9 535 aa16.57■□□□□ 0.24
COPB2-212ENST00000514508 AKAP4Q5JQC9 854 aa16.57■□□□□ 0.24
COPB2-212ENST00000514508 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
COPB2-212ENST00000514508 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
COPB2-212ENST00000514508 FCHSD2O94868 740 aa16.56■□□□□ 0.24
COPB2-212ENST00000514508 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
COPB2-212ENST00000514508 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
COPB2-212ENST00000514508 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
COPB2-212ENST00000514508 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
COPB2-212ENST00000514508 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
COPB2-212ENST00000514508 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
COPB2-212ENST00000514508 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
COPB2-212ENST00000514508 PIGBQ92521 554 aa16.55■□□□□ 0.24
COPB2-212ENST00000514508 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
COPB2-212ENST00000514508 PSDA5PKW4 1024 aaPredicted RBP16.53■□□□□ 0.24
COPB2-212ENST00000514508 CABP4P57796 275 aa16.53■□□□□ 0.24
COPB2-212ENST00000514508 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
COPB2-212ENST00000514508 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
COPB2-212ENST00000514508 HMGB2P26583 209 aaKnown RBP16.52■□□□□ 0.24
COPB2-212ENST00000514508 PAPPAQ13219 1627 aa16.52■□□□□ 0.23
COPB2-212ENST00000514508 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
COPB2-212ENST00000514508 NEFMP07197 916 aa16.51■□□□□ 0.23
COPB2-212ENST00000514508 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
COPB2-212ENST00000514508 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
COPB2-212ENST00000514508 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
COPB2-212ENST00000514508 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
COPB2-212ENST00000514508 CCNL1Q9UK58 526 aaPredicted RBP16.51■□□□□ 0.23
COPB2-212ENST00000514508 GNAT3A8MTJ3 354 aa16.5■□□□□ 0.23
COPB2-212ENST00000514508 SLC15A2Q16348 729 aa16.5■□□□□ 0.23
COPB2-212ENST00000514508 ANO8Q9HCE9 1232 aaPredicted RBP16.5■□□□□ 0.23
COPB2-212ENST00000514508 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
COPB2-212ENST00000514508 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
COPB2-212ENST00000514508 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
COPB2-212ENST00000514508 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
COPB2-212ENST00000514508 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
COPB2-212ENST00000514508 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
COPB2-212ENST00000514508 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
COPB2-212ENST00000514508 MRC1P22897 1456 aa16.48■□□□□ 0.23
COPB2-212ENST00000514508 C5P01031 1676 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms