RNA–Protein interactions for RNA: ENST00000514426.1

TSC22D3-216, Transcript of TSC22 domain family member 3, humanhuman

TSL 5 BASIC

Gene TSC22D3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-216ENST00000514426 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
TSC22D3-216ENST00000514426 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
TSC22D3-216ENST00000514426 EXOC5O00471 708 aa13.37□□□□□ -0.27
TSC22D3-216ENST00000514426 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
TSC22D3-216ENST00000514426 SULT6B1Q6IMI4 303 aa13.37□□□□□ -0.27
TSC22D3-216ENST00000514426 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
TSC22D3-216ENST00000514426 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
TSC22D3-216ENST00000514426 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
TSC22D3-216ENST00000514426 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 NEFMP07197 916 aa13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
TSC22D3-216ENST00000514426 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
TSC22D3-216ENST00000514426 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
TSC22D3-216ENST00000514426 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
TSC22D3-216ENST00000514426 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
TSC22D3-216ENST00000514426 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
TSC22D3-216ENST00000514426 KRT27Q7Z3Y8 459 aa13.34□□□□□ -0.27
TSC22D3-216ENST00000514426 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
TSC22D3-216ENST00000514426 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
TSC22D3-216ENST00000514426 NGEFQ8N5V2 710 aa13.33□□□□□ -0.28
TSC22D3-216ENST00000514426 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
TSC22D3-216ENST00000514426 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
TSC22D3-216ENST00000514426 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
TSC22D3-216ENST00000514426 SCN11AQ9UI33 1791 aa13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 PLEKHF1Q96S99 279 aa13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
TSC22D3-216ENST00000514426 HMOX1P09601 288 aa13.31□□□□□ -0.28
TSC22D3-216ENST00000514426 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
TSC22D3-216ENST00000514426 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
TSC22D3-216ENST00000514426 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
TSC22D3-216ENST00000514426 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
TSC22D3-216ENST00000514426 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
TSC22D3-216ENST00000514426 MRC1P22897 1456 aa13.3□□□□□ -0.28
TSC22D3-216ENST00000514426 A0A0G2JS52 829 aa13.3□□□□□ -0.28
TSC22D3-216ENST00000514426 MYT1Q01538 1121 aa13.3□□□□□ -0.28
TSC22D3-216ENST00000514426 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
TSC22D3-216ENST00000514426 DOT1LQ8TEK3 1739 aa13.3□□□□□ -0.28
TSC22D3-216ENST00000514426 PHKG2P15735 406 aa13.29□□□□□ -0.28
TSC22D3-216ENST00000514426 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
TSC22D3-216ENST00000514426 ADAMTS8Q9UP79 889 aa13.29□□□□□ -0.28
TSC22D3-216ENST00000514426 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
TSC22D3-216ENST00000514426 LMOD3Q0VAK6 560 aa13.28□□□□□ -0.28
TSC22D3-216ENST00000514426 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
TSC22D3-216ENST00000514426 MARCH10Q8NA82 808 aaPredicted RBP13.28□□□□□ -0.28
TSC22D3-216ENST00000514426 DCAF5Q96JK2 942 aa13.28□□□□□ -0.28
TSC22D3-216ENST00000514426 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
TSC22D3-216ENST00000514426 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
TSC22D3-216ENST00000514426 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
TSC22D3-216ENST00000514426 ITGB4P16144 1822 aa13.27□□□□□ -0.28
TSC22D3-216ENST00000514426 CYP27B1O15528 508 aa13.27□□□□□ -0.29
TSC22D3-216ENST00000514426 CCDC184Q52MB2 194 aa13.27□□□□□ -0.29
TSC22D3-216ENST00000514426 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
TSC22D3-216ENST00000514426 MIER1Q8N108 512 aa13.27□□□□□ -0.29
TSC22D3-216ENST00000514426 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.29
TSC22D3-216ENST00000514426 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 NFE2L2Q16236 605 aa13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 MTHFSDQ2M296 383 aaKnown RBP13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
TSC22D3-216ENST00000514426 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
TSC22D3-216ENST00000514426 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
TSC22D3-216ENST00000514426 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
TSC22D3-216ENST00000514426 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
TSC22D3-216ENST00000514426 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
TSC22D3-216ENST00000514426 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
TSC22D3-216ENST00000514426 BTAF1O14981 1849 aa13.23□□□□□ -0.29
TSC22D3-216ENST00000514426 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
TSC22D3-216ENST00000514426 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
TSC22D3-216ENST00000514426 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
TSC22D3-216ENST00000514426 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
TSC22D3-216ENST00000514426 LY75O60449 1722 aa13.22□□□□□ -0.29
TSC22D3-216ENST00000514426 CALD1Q05682 793 aaKnown RBP13.21□□□□□ -0.29
TSC22D3-216ENST00000514426 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
TSC22D3-216ENST00000514426 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
TSC22D3-216ENST00000514426 PLSCR1O15162 318 aa13.19□□□□□ -0.3
TSC22D3-216ENST00000514426 RIPK4P57078 832 aa13.19□□□□□ -0.3
TSC22D3-216ENST00000514426 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
TSC22D3-216ENST00000514426 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
TSC22D3-216ENST00000514426 SLC52A2Q9HAB3 445 aa13.19□□□□□ -0.3
TSC22D3-216ENST00000514426 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
TSC22D3-216ENST00000514426 TEFQ10587 303 aa13.18□□□□□ -0.3
TSC22D3-216ENST00000514426 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
TSC22D3-216ENST00000514426 RREB1Q92766 1687 aa13.18□□□□□ -0.3
TSC22D3-216ENST00000514426 IL16Q14005 1332 aa13.17□□□□□ -0.3
TSC22D3-216ENST00000514426 APAF1O14727 1248 aa13.17□□□□□ -0.3
TSC22D3-216ENST00000514426 CABP4P57796 275 aa13.17□□□□□ -0.3
TSC22D3-216ENST00000514426 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
TSC22D3-216ENST00000514426 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms