RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
NEDD9-214ENST00000513989 NHSQ6T4R5 1651 aa13.55□□□□□ -0.24
NEDD9-214ENST00000513989 INSRP06213 1382 aa13.55□□□□□ -0.24
NEDD9-214ENST00000513989 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
NEDD9-214ENST00000513989 BCL9O00512 1426 aa13.55□□□□□ -0.24
NEDD9-214ENST00000513989 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
NEDD9-214ENST00000513989 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
NEDD9-214ENST00000513989 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
NEDD9-214ENST00000513989 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
NEDD9-214ENST00000513989 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
NEDD9-214ENST00000513989 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
NEDD9-214ENST00000513989 UTRNP46939 3433 aa13.54□□□□□ -0.24
NEDD9-214ENST00000513989 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
NEDD9-214ENST00000513989 DDB1Q16531 1140 aa13.53□□□□□ -0.24
NEDD9-214ENST00000513989 BTAF1O14981 1849 aa13.53□□□□□ -0.24
NEDD9-214ENST00000513989 IL13P35225 146 aa13.52□□□□□ -0.25
NEDD9-214ENST00000513989 EIF4A2Q14240 407 aaKnown RBP13.52□□□□□ -0.25
NEDD9-214ENST00000513989 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
NEDD9-214ENST00000513989 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.25
NEDD9-214ENST00000513989 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
NEDD9-214ENST00000513989 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
NEDD9-214ENST00000513989 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
NEDD9-214ENST00000513989 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
NEDD9-214ENST00000513989 NEFMP07197 916 aa13.51□□□□□ -0.25
NEDD9-214ENST00000513989 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
NEDD9-214ENST00000513989 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■□□□□ 8.9
NEDD9-214ENST00000513989 PROM2Q8N271 834 aa13.51□□□□□ -0.25
NEDD9-214ENST00000513989 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
NEDD9-214ENST00000513989 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
NEDD9-214ENST00000513989 ERBB3P21860 1342 aa13.49□□□□□ -0.25
NEDD9-214ENST00000513989 PLSCR1O15162 318 aa13.49□□□□□ -0.25
NEDD9-214ENST00000513989 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
NEDD9-214ENST00000513989 FCHSD2O94868 740 aa13.48□□□□□ -0.25
NEDD9-214ENST00000513989 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
NEDD9-214ENST00000513989 EYA1Q99502 592 aa13.48□□□□□ -0.25
NEDD9-214ENST00000513989 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
NEDD9-214ENST00000513989 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 NBPF6Q5VWK0 638 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 NBPF4Q96M43 638 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
NEDD9-214ENST00000513989 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
NEDD9-214ENST00000513989 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
NEDD9-214ENST00000513989 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
NEDD9-214ENST00000513989 ANKRD26Q9UPS8 1709 aa13.45□□□□□ -0.26
NEDD9-214ENST00000513989 KCNQ2O43526 872 aa13.45□□□□□ -0.26
NEDD9-214ENST00000513989 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
NEDD9-214ENST00000513989 HMOX1P09601 288 aa13.44□□□□□ -0.26
NEDD9-214ENST00000513989 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
NEDD9-214ENST00000513989 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
NEDD9-214ENST00000513989 EXOC5O00471 708 aa13.43□□□□□ -0.26
NEDD9-214ENST00000513989 LY75O60449 1722 aa13.43□□□□□ -0.26
NEDD9-214ENST00000513989 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
NEDD9-214ENST00000513989 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 IL2RBP14784 551 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 AMOTQ4VCS5 1084 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
NEDD9-214ENST00000513989 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
NEDD9-214ENST00000513989 GOLGB1Q14789 3259 aaKnown RBP13.41□□□□□ -0.26
NEDD9-214ENST00000513989 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
NEDD9-214ENST00000513989 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
NEDD9-214ENST00000513989 SPG7Q9UQ90 795 aa13.41□□□□□ -0.26
NEDD9-214ENST00000513989 PRKAR2BP31323 418 aa13.4□□□□□ -0.26
NEDD9-214ENST00000513989 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
NEDD9-214ENST00000513989 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
NEDD9-214ENST00000513989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.26
NEDD9-214ENST00000513989 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
NEDD9-214ENST00000513989 PTGER2P43116 358 aa13.39□□□□□ -0.27
NEDD9-214ENST00000513989 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
NEDD9-214ENST00000513989 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
NEDD9-214ENST00000513989 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
NEDD9-214ENST00000513989 CHD4Q14839 1912 aa13.38□□□□□ -0.27
NEDD9-214ENST00000513989 KDRP35968 1356 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 MEGF6O75095 1541 aa13.37□□□□□ -0.27
NEDD9-214ENST00000513989 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
NEDD9-214ENST00000513989 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
NEDD9-214ENST00000513989 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
NEDD9-214ENST00000513989 LRRC4BQ9NT99 713 aa13.36□□□□□ -0.27
NEDD9-214ENST00000513989 ITGB4P16144 1822 aa13.36□□□□□ -0.27
NEDD9-214ENST00000513989 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
NEDD9-214ENST00000513989 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
NEDD9-214ENST00000513989 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
NEDD9-214ENST00000513989 ZNF827Q17R98 1081 aa13.35□□□□□ -0.27
NEDD9-214ENST00000513989 RTF1Q92541 710 aaKnown RBP13.35□□□□□ -0.27
NEDD9-214ENST00000513989 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
NEDD9-214ENST00000513989 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
NEDD9-214ENST00000513989 APAF1O14727 1248 aa13.34□□□□□ -0.27
NEDD9-214ENST00000513989 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
NEDD9-214ENST00000513989 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
NEDD9-214ENST00000513989 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms