RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-208ENST00000513965 SLC16A10Q8TF71 515 aa15.97■□□□□ 0.15
COPG1-208ENST00000513965 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
COPG1-208ENST00000513965 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
COPG1-208ENST00000513965 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
COPG1-208ENST00000513965 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
COPG1-208ENST00000513965 ANKRD36BQ8N2N9 1353 aa15.95■□□□□ 0.14
COPG1-208ENST00000513965 FYB1O15117 783 aa15.94■□□□□ 0.14
COPG1-208ENST00000513965 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
COPG1-208ENST00000513965 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
COPG1-208ENST00000513965 USP54Q70EL1 1684 aa15.93■□□□□ 0.14
COPG1-208ENST00000513965 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
COPG1-208ENST00000513965 MSL1Q68DK7 614 aa15.93■□□□□ 0.14
COPG1-208ENST00000513965 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
COPG1-208ENST00000513965 C1QTNF8P60827 252 aa15.92■□□□□ 0.14
COPG1-208ENST00000513965 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
COPG1-208ENST00000513965 COL23A1Q86Y22 540 aaPredicted RBP15.92■□□□□ 0.14
COPG1-208ENST00000513965 USP47Q96K76 1375 aa15.91■□□□□ 0.14
COPG1-208ENST00000513965 MAP3K5Q99683 1374 aa15.91■□□□□ 0.14
COPG1-208ENST00000513965 MEGF6O75095 1541 aa15.91■□□□□ 0.14
COPG1-208ENST00000513965 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
COPG1-208ENST00000513965 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
COPG1-208ENST00000513965 NSD2O96028 1365 aa15.9■□□□□ 0.14
COPG1-208ENST00000513965 TMF1P82094 1093 aa15.9■□□□□ 0.14
COPG1-208ENST00000513965 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
COPG1-208ENST00000513965 PPM1GO15355 546 aaPredicted RBP15.87■□□□□ 0.13
COPG1-208ENST00000513965 YBX3P16989 372 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■□□□□ 10.2
COPG1-208ENST00000513965 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
COPG1-208ENST00000513965 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
COPG1-208ENST00000513965 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
COPG1-208ENST00000513965 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
COPG1-208ENST00000513965 SMIM5Q71RC9 77 aa15.85■□□□□ 0.13
COPG1-208ENST00000513965 CHD4Q14839 1912 aa15.85■□□□□ 0.13
COPG1-208ENST00000513965 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
COPG1-208ENST00000513965 FAM208AQ9UK61 1670 aaKnown RBP15.84■□□□□ 0.13
COPG1-208ENST00000513965 CYP27B1O15528 508 aa15.84■□□□□ 0.13
COPG1-208ENST00000513965 GRIN3BO60391 1043 aa15.84■□□□□ 0.13
COPG1-208ENST00000513965 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
COPG1-208ENST00000513965 PCDH11XQ9BZA7 1347 aa15.84■□□□□ 0.13
COPG1-208ENST00000513965 PCDH11YQ9BZA8 1340 aa15.84■□□□□ 0.13
COPG1-208ENST00000513965 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
COPG1-208ENST00000513965 GOLGB1Q14789 3259 aaKnown RBP15.83■□□□□ 0.13
COPG1-208ENST00000513965 CARD14Q9BXL6 1004 aa15.83■□□□□ 0.12
COPG1-208ENST00000513965 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.12
COPG1-208ENST00000513965 INSRP06213 1382 aa15.83■□□□□ 0.12
COPG1-208ENST00000513965 PHF14O94880 888 aa15.82■□□□□ 0.12
COPG1-208ENST00000513965 PALLDQ8WX93 1383 aa15.82■□□□□ 0.12
COPG1-208ENST00000513965 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
COPG1-208ENST00000513965 FLAD1Q8NFF5 587 aa15.81■□□□□ 0.12
COPG1-208ENST00000513965 PIGBQ92521 554 aa15.81■□□□□ 0.12
COPG1-208ENST00000513965 AK7Q96M32 723 aa15.81■□□□□ 0.12
COPG1-208ENST00000513965 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
COPG1-208ENST00000513965 LY75O60449 1722 aa15.8■□□□□ 0.12
COPG1-208ENST00000513965 FLT4P35916 1363 aa15.8■□□□□ 0.12
COPG1-208ENST00000513965 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
COPG1-208ENST00000513965 SMARCC1Q92922 1105 aaPredicted RBP15.8■□□□□ 0.12
COPG1-208ENST00000513965 POLR3GLQ9BT43 218 aa15.8■□□□□ 0.12
COPG1-208ENST00000513965 SHANK3Q9BYB0 1731 aa15.8■□□□□ 0.12
COPG1-208ENST00000513965 CD2APQ9Y5K6 639 aa15.79■□□□□ 0.12
COPG1-208ENST00000513965 QSER1Q2KHR3 1735 aa15.79■□□□□ 0.12
COPG1-208ENST00000513965 ZNF526Q8TF50 670 aaPredicted RBP15.78■□□□□ 0.12
COPG1-208ENST00000513965 SPG7Q9UQ90 795 aa15.78■□□□□ 0.12
COPG1-208ENST00000513965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.77■□□□□ 0.12
COPG1-208ENST00000513965 HMGB2P26583 209 aaKnown RBP15.77■□□□□ 0.12
COPG1-208ENST00000513965 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
COPG1-208ENST00000513965 EYA1Q99502 592 aa15.76■□□□□ 0.11
COPG1-208ENST00000513965 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
COPG1-208ENST00000513965 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
COPG1-208ENST00000513965 COL24A1Q17RW2 1714 aa15.75■□□□□ 0.11
COPG1-208ENST00000513965 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
COPG1-208ENST00000513965 SIK1P57059 783 aa15.75■□□□□ 0.11
COPG1-208ENST00000513965 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
COPG1-208ENST00000513965 TMOD3Q9NYL9 352 aa15.75■□□□□ 0.11
COPG1-208ENST00000513965 ATP6V1AP38606 617 aa15.74■□□□□ 0.11
COPG1-208ENST00000513965 NKX1-1Q15270 411 aaPredicted RBP15.74■□□□□ 0.11
COPG1-208ENST00000513965 GPBP1L1Q9HC44 474 aaPredicted RBP15.74■□□□□ 0.11
COPG1-208ENST00000513965 KIF24Q5T7B8 1368 aa15.74■□□□□ 0.11
COPG1-208ENST00000513965 GNPATO15228 680 aa15.73■□□□□ 0.11
COPG1-208ENST00000513965 ITPK1Q13572 414 aa15.73■□□□□ 0.11
COPG1-208ENST00000513965 WASHC2AQ641Q2 1341 aa15.72■□□□□ 0.11
COPG1-208ENST00000513965 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
COPG1-208ENST00000513965 ATP10DQ9P241 1426 aa15.72■□□□□ 0.11
COPG1-208ENST00000513965 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
COPG1-208ENST00000513965 IFNL2Q8IZJ0 200 aa15.72■□□□□ 0.11
COPG1-208ENST00000513965 POLKQ9UBT6 870 aa15.72■□□□□ 0.11
COPG1-208ENST00000513965 C5P01031 1676 aa15.72■□□□□ 0.11
COPG1-208ENST00000513965 PHKG2P15735 406 aa15.71■□□□□ 0.11
COPG1-208ENST00000513965 SSFA2P28290 1259 aa15.71■□□□□ 0.11
COPG1-208ENST00000513965 ATG3Q9NT62 314 aa15.7■□□□□ 0.1
COPG1-208ENST00000513965 C4BP0C0L5 1744 aa15.69■□□□□ 0.1
COPG1-208ENST00000513965 KIF20BQ96Q89 1820 aa15.69■□□□□ 0.1
COPG1-208ENST00000513965 EIF4A2Q14240 407 aaKnown RBP15.69■□□□□ 0.1
COPG1-208ENST00000513965 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
COPG1-208ENST00000513965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.1
COPG1-208ENST00000513965 MMP10P09238 476 aa15.68■□□□□ 0.1
COPG1-208ENST00000513965 ITGB4P16144 1822 aa15.67■□□□□ 0.1
COPG1-208ENST00000513965 TRAPPC3LQ5T215 181 aa15.67■□□□□ 0.1
COPG1-208ENST00000513965 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
COPG1-208ENST00000513965 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
COPG1-208ENST00000513965 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
COPG1-208ENST00000513965 RTCBQ9Y3I0 505 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms