RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 SMG6Q86US8 1419 aaKnown RBP35.18■■■■□ 3.22
CLDND1-226ENST00000513287 INSRP06213 1382 aa35.18■■■■□ 3.22
CLDND1-226ENST00000513287 YY1P25490 414 aa35.18■■■■□ 3.22
CLDND1-226ENST00000513287 NBPF6Q5VWK0 638 aa35.18■■■■□ 3.22
CLDND1-226ENST00000513287 NBPF4Q96M43 638 aa35.18■■■■□ 3.22
CLDND1-226ENST00000513287 KIF20BQ96Q89 1820 aa35.18■■■■□ 3.22
CLDND1-226ENST00000513287 MEGF6O75095 1541 aa35.17■■■■□ 3.22
CLDND1-226ENST00000513287 AKT1S1Q96B36 256 aa35.17■■■■□ 3.22
CLDND1-226ENST00000513287 SLC16A10Q8TF71 515 aa35.16■■■■□ 3.22
CLDND1-226ENST00000513287 PRIM1P49642 420 aaKnown RBP35.15■■■■□ 3.22
CLDND1-226ENST00000513287 FLT4P35916 1363 aa35.14■■■■□ 3.22
CLDND1-226ENST00000513287 ZNF827Q17R98 1081 aa35.14■■■■□ 3.22
CLDND1-226ENST00000513287 SYT17Q9BSW7 474 aa35.14■■■■□ 3.22
CLDND1-226ENST00000513287 LY75O60449 1722 aa35.14■■■■□ 3.22
CLDND1-226ENST00000513287 NSD2O96028 1365 aa35.13■■■■□ 3.21
CLDND1-226ENST00000513287 DOT1LQ8TEK3 1739 aa35.13■■■■□ 3.21
CLDND1-226ENST00000513287 RAPGEF4Q8WZA2 1011 aa35.12■■■■□ 3.21
CLDND1-226ENST00000513287 CARD14Q9BXL6 1004 aa35.12■■■■□ 3.21
CLDND1-226ENST00000513287 MAP3K5Q99683 1374 aa35.12■■■■□ 3.21
CLDND1-226ENST00000513287 FHDC1Q9C0D6 1143 aaPredicted RBP35.11■■■■□ 3.21
CLDND1-226ENST00000513287 HSP90AB2PQ58FF8 381 aa35.09■■■■□ 3.21
CLDND1-226ENST00000513287 SYTL4Q96C24 671 aaPredicted RBP35.09■■■■□ 3.21
CLDND1-226ENST00000513287 COL24A1Q17RW2 1714 aa35.09■■■■□ 3.21
CLDND1-226ENST00000513287 HMGB2P26583 209 aaKnown RBP35.08■■■■□ 3.21
CLDND1-226ENST00000513287 ARXQ96QS3 562 aa35.08■■■■□ 3.21
CLDND1-226ENST00000513287 TATP17735 454 aaPredicted RBP35.07■■■■□ 3.2
CLDND1-226ENST00000513287 PCDH11XQ9BZA7 1347 aa35.04■■■■□ 3.2
CLDND1-226ENST00000513287 PCDH11YQ9BZA8 1340 aa35.04■■■■□ 3.2
CLDND1-226ENST00000513287 NSD3Q9BZ95 1437 aa35.03■■■■□ 3.2
CLDND1-226ENST00000513287 PNPLA7Q6ZV29 1317 aa35.03■■■■□ 3.2
CLDND1-226ENST00000513287 NCAPD2Q15021 1401 aa35.02■■■■□ 3.2
CLDND1-226ENST00000513287 USHBP1Q8N6Y0 703 aa35.02■■■■□ 3.2
CLDND1-226ENST00000513287 TFCP2L1Q9NZI6 479 aa35■■■■□ 3.19
CLDND1-226ENST00000513287 ANKRD26Q9UPS8 1709 aa35■■■■□ 3.19
CLDND1-226ENST00000513287 CCNL1Q9UK58 526 aaPredicted RBP34.98■■■■□ 3.19
CLDND1-226ENST00000513287 TUBGCP6Q96RT7 1819 aa34.97■■■■□ 3.19
CLDND1-226ENST00000513287 WASHC2AQ641Q2 1341 aa34.97■■■■□ 3.19
CLDND1-226ENST00000513287 EMILIN1Q9Y6C2 1016 aa34.96■■■■□ 3.19
CLDND1-226ENST00000513287 POLD1P28340 1107 aa34.95■■■■□ 3.19
CLDND1-226ENST00000513287 PKD1L3Q7Z443 1732 aa34.94■■■■□ 3.18
CLDND1-226ENST00000513287 UTRNP46939 3433 aa34.93■■■■□ 3.18
CLDND1-226ENST00000513287 MAP2P11137 1827 aaKnown RBP34.93■■■■□ 3.18
CLDND1-226ENST00000513287 KCNQ4P56696 695 aa34.93■■■■□ 3.18
CLDND1-226ENST00000513287 CYP27B1O15528 508 aa34.92■■■■□ 3.18
CLDND1-226ENST00000513287 NKX1-1Q15270 411 aaPredicted RBP34.91■■■■□ 3.18
CLDND1-226ENST00000513287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.91■■■■□ 3.18
CLDND1-226ENST00000513287 CHD4Q14839 1912 aa34.91■■■■□ 3.18
CLDND1-226ENST00000513287 PLEKHG2Q9H7P9 1386 aa34.88■■■■□ 3.17
CLDND1-226ENST00000513287 SMARCC1Q92922 1105 aaPredicted RBP34.86■■■■□ 3.17
CLDND1-226ENST00000513287 POLKQ9UBT6 870 aa34.86■■■■□ 3.17
CLDND1-226ENST00000513287 SPG7Q9UQ90 795 aa34.86■■■■□ 3.17
CLDND1-226ENST00000513287 ITGB4P16144 1822 aa34.85■■■■□ 3.17
CLDND1-226ENST00000513287 FLAD1Q8NFF5 587 aa34.85■■■■□ 3.17
CLDND1-226ENST00000513287 C5P01031 1676 aa34.85■■■■□ 3.17
CLDND1-226ENST00000513287 TAF1LQ8IZX4 1826 aa34.84■■■■□ 3.17
CLDND1-226ENST00000513287 COL23A1Q86Y22 540 aaPredicted RBP34.84■■■■□ 3.17
CLDND1-226ENST00000513287 EYA1Q99502 592 aa34.84■■■■□ 3.17
CLDND1-226ENST00000513287 PCGF6Q9BYE7 350 aa34.84■■■■□ 3.17
CLDND1-226ENST00000513287 PALLDQ8WX93 1383 aa34.84■■■■□ 3.17
CLDND1-226ENST00000513287 PPM1GO15355 546 aaPredicted RBP34.83■■■■□ 3.17
CLDND1-226ENST00000513287 MPRIPQ6WCQ1 1025 aa34.83■■■■□ 3.17
CLDND1-226ENST00000513287 TOGARAM1Q9Y4F4 1720 aa34.82■■■■□ 3.16
CLDND1-226ENST00000513287 EIF4G2P78344 907 aaKnown RBP eCLIP34.82■■■■□ 3.16
CLDND1-226ENST00000513287 ZNF784Q8NCA9 323 aaPredicted RBP34.78■■■■□ 3.16
CLDND1-226ENST00000513287 PIGBQ92521 554 aa34.77■■■■□ 3.16
CLDND1-226ENST00000513287 GPR162Q16538 588 aa34.75■■■■□ 3.15
CLDND1-226ENST00000513287 IFNL2Q8IZJ0 200 aa34.74■■■■□ 3.15
CLDND1-226ENST00000513287 C4BP0C0L5 1744 aa34.72■■■■□ 3.15
CLDND1-226ENST00000513287 MSH5O43196 834 aa34.72■■■■□ 3.15
CLDND1-226ENST00000513287 EIF4A2Q14240 407 aaKnown RBP34.72■■■■□ 3.15
CLDND1-226ENST00000513287 HSPA5P11021 654 aaKnown RBP34.71■■■■□ 3.15
CLDND1-226ENST00000513287 PHKG2P15735 406 aa34.71■■■■□ 3.15
CLDND1-226ENST00000513287 PANK3Q9H999 370 aa34.69■■■■□ 3.14
CLDND1-226ENST00000513287 KLHL34Q8N239 644 aa34.68■■■■□ 3.14
CLDND1-226ENST00000513287 IGSF1Q8N6C5 1336 aa34.68■■■■□ 3.14
CLDND1-226ENST00000513287 POLR3GLQ9BT43 218 aa34.68■■■■□ 3.14
CLDND1-226ENST00000513287 TMOD3Q9NYL9 352 aa34.68■■■■□ 3.14
CLDND1-226ENST00000513287 LOC102724428A0A0B4J2F2 783 aa34.67■■■■□ 3.14
CLDND1-226ENST00000513287 SIK1P57059 783 aa34.67■■■■□ 3.14
CLDND1-226ENST00000513287 NLGN2Q8NFZ4 835 aa34.67■■■■□ 3.14
CLDND1-226ENST00000513287 CD2APQ9Y5K6 639 aa34.67■■■■□ 3.14
CLDND1-226ENST00000513287 UBR3Q6ZT12 1888 aa34.67■■■■□ 3.14
CLDND1-226ENST00000513287 AK7Q96M32 723 aa34.66■■■■□ 3.14
CLDND1-226ENST00000513287 GRIN3BO60391 1043 aa34.64■■■■□ 3.14
CLDND1-226ENST00000513287 SSFA2P28290 1259 aa34.64■■■■□ 3.14
CLDND1-226ENST00000513287 GOLGB1Q14789 3259 aaKnown RBP34.63■■■■□ 3.13
CLDND1-226ENST00000513287 TNNT2P45379 298 aaPredicted RBP34.62■■■■□ 3.13
CLDND1-226ENST00000513287 ERVV-2B6SEH9 535 aa34.61■■■■□ 3.13
CLDND1-226ENST00000513287 HSP90AB1P08238 724 aaKnown RBP34.6■■■■□ 3.13
CLDND1-226ENST00000513287 MSL1Q68DK7 614 aa34.6■■■■□ 3.13
CLDND1-226ENST00000513287 ASAP1Q9ULH1 1129 aa34.6■■■■□ 3.13
CLDND1-226ENST00000513287 ZNF831Q5JPB2 1677 aa34.59■■■■□ 3.13
CLDND1-226ENST00000513287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.58■■■■□ 3.13
CLDND1-226ENST00000513287 ATG3Q9NT62 314 aa34.58■■■■□ 3.13
CLDND1-226ENST00000513287 AMOTQ4VCS5 1084 aa34.57■■■■□ 3.12
CLDND1-226ENST00000513287 PLEKHO1Q53GL0 409 aaPredicted RBP34.57■■■■□ 3.12
CLDND1-226ENST00000513287 AMIGO3Q86WK7 504 aa34.57■■■■□ 3.12
CLDND1-226ENST00000513287 LINC00116Q8NCU8 138 aa34.57■■■■□ 3.12
CLDND1-226ENST00000513287 CCER1Q8TC90 406 aaPredicted RBP34.57■■■■□ 3.12
CLDND1-226ENST00000513287 DCAF5Q96JK2 942 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms