RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 MEGF6O75095 1541 aa17.39■□□□□ 0.37
UBE2D3-231ENST00000513098 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-231ENST00000513098 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
UBE2D3-231ENST00000513098 PTGER2P43116 358 aa17.38■□□□□ 0.37
UBE2D3-231ENST00000513098 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
UBE2D3-231ENST00000513098 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
UBE2D3-231ENST00000513098 PPP1R1BQ9UD71 204 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-231ENST00000513098 PAPPAQ13219 1627 aa17.36■□□□□ 0.37
UBE2D3-231ENST00000513098 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-231ENST00000513098 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-231ENST00000513098 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
UBE2D3-231ENST00000513098 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
UBE2D3-231ENST00000513098 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
UBE2D3-231ENST00000513098 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 SGIP1Q9BQI5 828 aa17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 NSD2O96028 1365 aa17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
UBE2D3-231ENST00000513098 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
UBE2D3-231ENST00000513098 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
UBE2D3-231ENST00000513098 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
UBE2D3-231ENST00000513098 ZNF827Q17R98 1081 aa17.33■□□□□ 0.36
UBE2D3-231ENST00000513098 SYTL4Q96C24 671 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-231ENST00000513098 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-231ENST00000513098 UTRNP46939 3433 aa17.33■□□□□ 0.36
UBE2D3-231ENST00000513098 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-231ENST00000513098 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
UBE2D3-231ENST00000513098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBE2D3-231ENST00000513098 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-231ENST00000513098 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
UBE2D3-231ENST00000513098 CYP27B1O15528 508 aa17.31■□□□□ 0.36
UBE2D3-231ENST00000513098 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
UBE2D3-231ENST00000513098 PANK3Q9H999 370 aa17.31■□□□□ 0.36
UBE2D3-231ENST00000513098 LY75O60449 1722 aa17.3■□□□□ 0.36
UBE2D3-231ENST00000513098 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
UBE2D3-231ENST00000513098 EYA1Q99502 592 aa17.29■□□□□ 0.36
UBE2D3-231ENST00000513098 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
UBE2D3-231ENST00000513098 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
UBE2D3-231ENST00000513098 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
UBE2D3-231ENST00000513098 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
UBE2D3-231ENST00000513098 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
UBE2D3-231ENST00000513098 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
UBE2D3-231ENST00000513098 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
UBE2D3-231ENST00000513098 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
UBE2D3-231ENST00000513098 PNPLA7Q6ZV29 1317 aa17.26■□□□□ 0.35
UBE2D3-231ENST00000513098 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
UBE2D3-231ENST00000513098 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
UBE2D3-231ENST00000513098 PKD1L3Q7Z443 1732 aa17.25■□□□□ 0.35
UBE2D3-231ENST00000513098 KCNQ4P56696 695 aa17.25■□□□□ 0.35
UBE2D3-231ENST00000513098 EIF4A2Q14240 407 aaKnown RBP17.25■□□□□ 0.35
UBE2D3-231ENST00000513098 ARXQ96QS3 562 aa17.25■□□□□ 0.35
UBE2D3-231ENST00000513098 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
UBE2D3-231ENST00000513098 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
UBE2D3-231ENST00000513098 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
UBE2D3-231ENST00000513098 MPRIPQ6WCQ1 1025 aa17.23■□□□□ 0.35
UBE2D3-231ENST00000513098 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-231ENST00000513098 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
UBE2D3-231ENST00000513098 PIGBQ92521 554 aa17.22■□□□□ 0.35
UBE2D3-231ENST00000513098 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
UBE2D3-231ENST00000513098 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 ITGB4P16144 1822 aa17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 PHKG2P15735 406 aa17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 YY1P25490 414 aa17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
UBE2D3-231ENST00000513098 POLD1P28340 1107 aa17.19■□□□□ 0.34
UBE2D3-231ENST00000513098 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
UBE2D3-231ENST00000513098 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
UBE2D3-231ENST00000513098 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
UBE2D3-231ENST00000513098 TUBGCP6Q96RT7 1819 aa17.18■□□□□ 0.34
UBE2D3-231ENST00000513098 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
UBE2D3-231ENST00000513098 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
UBE2D3-231ENST00000513098 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
UBE2D3-231ENST00000513098 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
UBE2D3-231ENST00000513098 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
UBE2D3-231ENST00000513098 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
UBE2D3-231ENST00000513098 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
UBE2D3-231ENST00000513098 LOC102724428A0A0B4J2F2 783 aa17.15■□□□□ 0.34
UBE2D3-231ENST00000513098 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-231ENST00000513098 SIK1P57059 783 aa17.15■□□□□ 0.34
UBE2D3-231ENST00000513098 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-231ENST00000513098 C5P01031 1676 aa17.15■□□□□ 0.34
UBE2D3-231ENST00000513098 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
UBE2D3-231ENST00000513098 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
UBE2D3-231ENST00000513098 IL13P35225 146 aa17.13■□□□□ 0.33
UBE2D3-231ENST00000513098 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
UBE2D3-231ENST00000513098 KDRP35968 1356 aa17.12■□□□□ 0.33
UBE2D3-231ENST00000513098 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
UBE2D3-231ENST00000513098 MSH5O43196 834 aa17.11■□□□□ 0.33
UBE2D3-231ENST00000513098 SSFA2P28290 1259 aa17.1■□□□□ 0.33
UBE2D3-231ENST00000513098 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
UBE2D3-231ENST00000513098 AK7Q96M32 723 aa17.1■□□□□ 0.33
UBE2D3-231ENST00000513098 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
UBE2D3-231ENST00000513098 ITPK1Q13572 414 aa17.09■□□□□ 0.33
UBE2D3-231ENST00000513098 SULT6B1Q6IMI4 303 aa17.09■□□□□ 0.33
UBE2D3-231ENST00000513098 AMIGO3Q86WK7 504 aa17.09■□□□□ 0.33
UBE2D3-231ENST00000513098 AEBP1Q8IUX7 1158 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms