RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 TWISTNBQ3B726 338 aaPredicted RBP24.52■■□□□ 1.52
APBB3-219ENST00000511896 NBPF6Q5VWK0 638 aa24.52■■□□□ 1.52
APBB3-219ENST00000511896 RTF1Q92541 710 aaKnown RBP24.52■■□□□ 1.52
APBB3-219ENST00000511896 NBPF4Q96M43 638 aa24.52■■□□□ 1.52
APBB3-219ENST00000511896 CRB1P82279 1406 aa24.52■■□□□ 1.52
APBB3-219ENST00000511896 FTSJ3Q8IY81 847 aaKnown RBP24.51■■□□□ 1.51
APBB3-219ENST00000511896 USHBP1Q8N6Y0 703 aa24.51■■□□□ 1.51
APBB3-219ENST00000511896 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
APBB3-219ENST00000511896 MVPQ14764 893 aaKnown RBP24.5■■□□□ 1.51
APBB3-219ENST00000511896 HTATSF1O43719 755 aaKnown RBP24.49■■□□□ 1.51
APBB3-219ENST00000511896 MED1Q15648 1581 aaPredicted RBP24.47■■□□□ 1.51
APBB3-219ENST00000511896 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
APBB3-219ENST00000511896 MRPL50Q8N5N7 158 aaKnown RBP24.46■■□□□ 1.51
APBB3-219ENST00000511896 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
APBB3-219ENST00000511896 TCERG1O14776 1098 aaKnown RBP24.45■■□□□ 1.51
APBB3-219ENST00000511896 AXIN2Q9Y2T1 843 aa24.45■■□□□ 1.51
APBB3-219ENST00000511896 BRINP3Q76B58 766 aa24.45■■□□□ 1.5
APBB3-219ENST00000511896 PXDNQ92626 1479 aa24.45■■□□□ 1.5
APBB3-219ENST00000511896 KIAA0232Q92628 1395 aa24.45■■□□□ 1.5
APBB3-219ENST00000511896 RGPD2P0DJD1 1756 aa24.44■■□□□ 1.5
APBB3-219ENST00000511896 TNS3Q68CZ2 1445 aa24.44■■□□□ 1.5
APBB3-219ENST00000511896 IGHDP01880 384 aa24.44■■□□□ 1.5
APBB3-219ENST00000511896 ZC3H6P61129 1189 aaKnown RBP24.44■■□□□ 1.5
APBB3-219ENST00000511896 ANKRD24Q8TF21 1146 aa24.44■■□□□ 1.5
APBB3-219ENST00000511896 MAP3K5Q99683 1374 aa24.43■■□□□ 1.5
APBB3-219ENST00000511896 ARHGAP45Q92619 1136 aa24.43■■□□□ 1.5
APBB3-219ENST00000511896 KRT24Q2M2I5 525 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 SLAIN2Q9P270 581 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 SPATA31A3Q5VYP0 1347 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 SKAP1Q86WV1 359 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 MIS18AQ9NYP9 233 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 DDX19BQ9UMR2 479 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 PCDHB15Q9Y5E8 787 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 NCAPD2Q15021 1401 aa24.42■■□□□ 1.5
APBB3-219ENST00000511896 HAP1P54257 671 aaPredicted RBP24.41■■□□□ 1.5
APBB3-219ENST00000511896 IL17REQ8NFR9 667 aa24.41■■□□□ 1.5
APBB3-219ENST00000511896 ITPRIPQ8IWB1 547 aa24.4■■□□□ 1.5
APBB3-219ENST00000511896 TMEM57Q8N5G2 664 aa24.4■■□□□ 1.5
APBB3-219ENST00000511896 TSPYL4Q9UJ04 414 aa24.4■■□□□ 1.5
APBB3-219ENST00000511896 LRRC37A3O60309 1634 aa24.39■■□□□ 1.5
APBB3-219ENST00000511896 CABLES1Q8TDN4 633 aa24.39■■□□□ 1.49
APBB3-219ENST00000511896 ERBB3P21860 1342 aa24.38■■□□□ 1.49
APBB3-219ENST00000511896 RGPD5Q99666 1765 aa24.37■■□□□ 1.49
APBB3-219ENST00000511896 CAMTA1Q9Y6Y1 1673 aa24.35■■□□□ 1.49
APBB3-219ENST00000511896 PLEKHO1Q53GL0 409 aaPredicted RBP24.34■■□□□ 1.49
APBB3-219ENST00000511896 CEMIPQ8WUJ3 1361 aa24.34■■□□□ 1.49
APBB3-219ENST00000511896 TAF7Q15545 349 aaPredicted RBP24.34■■□□□ 1.49
APBB3-219ENST00000511896 AMOTQ4VCS5 1084 aa24.34■■□□□ 1.49
APBB3-219ENST00000511896 ZBTB40Q9NUA8 1239 aa24.34■■□□□ 1.49
APBB3-219ENST00000511896 BABAM1Q9NWV8 329 aa24.34■■□□□ 1.49
APBB3-219ENST00000511896 SOS2Q07890 1332 aaPredicted RBP24.33■■□□□ 1.49
APBB3-219ENST00000511896 ABCC4O15439 1325 aa24.32■■□□□ 1.48
APBB3-219ENST00000511896 API5Q9BZZ5 524 aaKnown RBP24.32■■□□□ 1.48
APBB3-219ENST00000511896 CRYBG1Q9Y4K1 1723 aa24.32■■□□□ 1.48
APBB3-219ENST00000511896 COL18A1P39060 1754 aa24.31■■□□□ 1.48
APBB3-219ENST00000511896 AKAP4Q5JQC9 854 aa24.31■■□□□ 1.48
APBB3-219ENST00000511896 ZNF530Q6P9A1 599 aaPredicted RBP24.31■■□□□ 1.48
APBB3-219ENST00000511896 RWDD1Q9H446 243 aaPredicted RBP24.31■■□□□ 1.48
APBB3-219ENST00000511896 CPDO75976 1380 aa24.29■■□□□ 1.48
APBB3-219ENST00000511896 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
APBB3-219ENST00000511896 LMO7Q8WWI1 1683 aa24.29■■□□□ 1.48
APBB3-219ENST00000511896 CHRNA2Q15822 529 aa24.28■■□□□ 1.48
APBB3-219ENST00000511896 ABCC6O95255 1503 aa24.27■■□□□ 1.48
APBB3-219ENST00000511896 ZBTB7BO15156 539 aaPredicted RBP24.27■■□□□ 1.48
APBB3-219ENST00000511896 NLRP2Q9NX02 1062 aa24.27■■□□□ 1.48
APBB3-219ENST00000511896 PDE4AP27815 886 aa24.27■■□□□ 1.48
APBB3-219ENST00000511896 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
APBB3-219ENST00000511896 HDAC1Q13547 482 aaPredicted RBP24.26■■□□□ 1.47
APBB3-219ENST00000511896 RGS3P49796 1198 aa24.25■■□□□ 1.47
APBB3-219ENST00000511896 C1orf141Q5JVX7 400 aa24.25■■□□□ 1.47
APBB3-219ENST00000511896 BACH2Q9BYV9 841 aa24.25■■□□□ 1.47
APBB3-219ENST00000511896 CHMP4BQ9H444 224 aaKnown RBP24.25■■□□□ 1.47
APBB3-219ENST00000511896 PTPRCP08575 1304 aa24.24■■□□□ 1.47
APBB3-219ENST00000511896 SOS1Q07889 1333 aaPredicted RBP24.24■■□□□ 1.47
APBB3-219ENST00000511896 MPRIPQ6WCQ1 1025 aa24.24■■□□□ 1.47
APBB3-219ENST00000511896 RGS12O14924 1447 aa24.24■■□□□ 1.47
APBB3-219ENST00000511896 RAPGEF4Q8WZA2 1011 aa24.23■■□□□ 1.47
APBB3-219ENST00000511896 CSB-PGBD3P0DP91 1061 aa24.22■■□□□ 1.47
APBB3-219ENST00000511896 RNMTO43148 476 aaKnown RBP24.22■■□□□ 1.47
APBB3-219ENST00000511896 INTS3Q68E01 1043 aaKnown RBP24.22■■□□□ 1.47
APBB3-219ENST00000511896 TEFQ10587 303 aa24.21■■□□□ 1.47
APBB3-219ENST00000511896 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
APBB3-219ENST00000511896 CCDC30Q5VVM6 783 aa24.2■■□□□ 1.47
APBB3-219ENST00000511896 STK31Q9BXU1 1019 aa24.2■■□□□ 1.46
APBB3-219ENST00000511896 OVOS2A0A0G2JMS6 1433 aa24.2■■□□□ 1.46
APBB3-219ENST00000511896 G2E3Q7L622 706 aa24.18■■□□□ 1.46
APBB3-219ENST00000511896 PRDM11Q9NQV5 511 aa24.18■■□□□ 1.46
APBB3-219ENST00000511896 PDZRN3Q9UPQ7 1066 aa24.18■■□□□ 1.46
APBB3-219ENST00000511896 TATP17735 454 aaPredicted RBP24.18■■□□□ 1.46
APBB3-219ENST00000511896 EIF4A1P60842 406 aaKnown RBP24.18■■□□□ 1.46
APBB3-219ENST00000511896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.18■■□□□ 1.46
APBB3-219ENST00000511896 NHSL1Q5SYE7 1610 aa24.18■■□□□ 1.46
APBB3-219ENST00000511896 BTBD11A6QL63 1104 aa24.17■■□□□ 1.46
APBB3-219ENST00000511896 VIRMAQ69YN4 1812 aaKnown RBP24.16■■□□□ 1.46
APBB3-219ENST00000511896 MEGF6O75095 1541 aa24.16■■□□□ 1.46
APBB3-219ENST00000511896 KDM3BQ7LBC6 1761 aa24.16■■□□□ 1.46
APBB3-219ENST00000511896 SMC5Q8IY18 1101 aa24.16■■□□□ 1.46
APBB3-219ENST00000511896 CACNA1FO60840 1977 aa24.15■■□□□ 1.46
APBB3-219ENST00000511896 PLEKHG2Q9H7P9 1386 aa24.15■■□□□ 1.46
APBB3-219ENST00000511896 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms