RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 NPC1L1Q9UHC9 1359 aa18.98■□□□□ 0.63
DDX41-212ENST00000511040 KCNQ2O43526 872 aa18.98■□□□□ 0.63
DDX41-212ENST00000511040 BCL9O00512 1426 aa18.98■□□□□ 0.63
DDX41-212ENST00000511040 CAMKK2Q96RR4 588 aa18.97■□□□□ 0.63
DDX41-212ENST00000511040 BCL11BQ9C0K0 894 aaPredicted RBP18.97■□□□□ 0.63
DDX41-212ENST00000511040 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
DDX41-212ENST00000511040 NCAPD2Q15021 1401 aa18.96■□□□□ 0.63
DDX41-212ENST00000511040 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
DDX41-212ENST00000511040 IGSF1Q8N6C5 1336 aa18.94■□□□□ 0.62
DDX41-212ENST00000511040 IL13P35225 146 aa18.93■□□□□ 0.62
DDX41-212ENST00000511040 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
DDX41-212ENST00000511040 AEBP1Q8IUX7 1158 aa18.92■□□□□ 0.62
DDX41-212ENST00000511040 DDX10Q13206 875 aaKnown RBP18.91■□□□□ 0.62
DDX41-212ENST00000511040 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
DDX41-212ENST00000511040 PCDH11XQ9BZA7 1347 aa18.91■□□□□ 0.62
DDX41-212ENST00000511040 PCDH11YQ9BZA8 1340 aa18.91■□□□□ 0.62
DDX41-212ENST00000511040 CYP27B1O15528 508 aa18.9■□□□□ 0.62
DDX41-212ENST00000511040 PRIM1P49642 420 aaKnown RBP18.9■□□□□ 0.62
DDX41-212ENST00000511040 PKD1L3Q7Z443 1732 aa18.89■□□□□ 0.61
DDX41-212ENST00000511040 PSDA5PKW4 1024 aaPredicted RBP18.89■□□□□ 0.61
DDX41-212ENST00000511040 SULT6B1Q6IMI4 303 aa18.89■□□□□ 0.61
DDX41-212ENST00000511040 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
DDX41-212ENST00000511040 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
DDX41-212ENST00000511040 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
DDX41-212ENST00000511040 BTAF1O14981 1849 aa18.88■□□□□ 0.61
DDX41-212ENST00000511040 PLSCR1O15162 318 aa18.87■□□□□ 0.61
DDX41-212ENST00000511040 DIAPH1O60610 1272 aaKnown RBP18.87■□□□□ 0.61
DDX41-212ENST00000511040 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
DDX41-212ENST00000511040 RREB1Q92766 1687 aa18.87■□□□□ 0.61
DDX41-212ENST00000511040 NUP188Q5SRE5 1749 aa18.86■□□□□ 0.61
DDX41-212ENST00000511040 PROM2Q8N271 834 aa18.86■□□□□ 0.61
DDX41-212ENST00000511040 COL3A1P02461 1466 aaPredicted RBP18.85■□□□□ 0.61
DDX41-212ENST00000511040 HMOX1P09601 288 aa18.85■□□□□ 0.61
DDX41-212ENST00000511040 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
DDX41-212ENST00000511040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
DDX41-212ENST00000511040 RGPD3A6NKT7 1758 aaPredicted RBP18.83■□□□□ 0.61
DDX41-212ENST00000511040 RGPD4Q7Z3J3 1758 aa18.83■□□□□ 0.61
DDX41-212ENST00000511040 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.6
DDX41-212ENST00000511040 PHKG2P15735 406 aa18.83■□□□□ 0.6
DDX41-212ENST00000511040 TXNRD1Q16881 649 aa18.83■□□□□ 0.6
DDX41-212ENST00000511040 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.6
DDX41-212ENST00000511040 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
DDX41-212ENST00000511040 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
DDX41-212ENST00000511040 CFAP53Q96M91 514 aa18.82■□□□□ 0.6
DDX41-212ENST00000511040 KDRP35968 1356 aa18.81■□□□□ 0.6
DDX41-212ENST00000511040 TOGARAM1Q9Y4F4 1720 aa18.81■□□□□ 0.6
DDX41-212ENST00000511040 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
DDX41-212ENST00000511040 MPRIPQ6WCQ1 1025 aa18.81■□□□□ 0.6
DDX41-212ENST00000511040 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
DDX41-212ENST00000511040 ANO8Q9HCE9 1232 aaPredicted RBP18.8■□□□□ 0.6
DDX41-212ENST00000511040 KCNQ4P56696 695 aa18.79■□□□□ 0.6
DDX41-212ENST00000511040 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
DDX41-212ENST00000511040 ITGB4P16144 1822 aa18.77■□□□□ 0.6
DDX41-212ENST00000511040 LRRC4BQ9NT99 713 aa18.77■□□□□ 0.6
DDX41-212ENST00000511040 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
DDX41-212ENST00000511040 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
DDX41-212ENST00000511040 PIGBQ92521 554 aa18.76■□□□□ 0.59
DDX41-212ENST00000511040 TMOD3Q9NYL9 352 aa18.75■□□□□ 0.59
DDX41-212ENST00000511040 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
DDX41-212ENST00000511040 NUDCQ9Y266 331 aa18.74■□□□□ 0.59
DDX41-212ENST00000511040 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
DDX41-212ENST00000511040 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
DDX41-212ENST00000511040 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.593e-7■■■■□ 19.9
DDX41-212ENST00000511040 RALBP1Q15311 655 aa18.73■□□□□ 0.59
DDX41-212ENST00000511040 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
DDX41-212ENST00000511040 DCAF5Q96JK2 942 aa18.73■□□□□ 0.59
DDX41-212ENST00000511040 STK32BQ9NY57 414 aa18.73■□□□□ 0.59
DDX41-212ENST00000511040 PALLDQ8WX93 1383 aa18.72■□□□□ 0.59
DDX41-212ENST00000511040 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
DDX41-212ENST00000511040 SLC27A3Q5K4L6 730 aa18.72■□□□□ 0.59
DDX41-212ENST00000511040 CCNL1Q9UK58 526 aaPredicted RBP18.72■□□□□ 0.59
DDX41-212ENST00000511040 LY75O60449 1722 aa18.71■□□□□ 0.59
DDX41-212ENST00000511040 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
DDX41-212ENST00000511040 ZNF827Q17R98 1081 aa18.71■□□□□ 0.59
DDX41-212ENST00000511040 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.59
DDX41-212ENST00000511040 SRCAPQ6ZRS2 3230 aa18.71■□□□□ 0.59
DDX41-212ENST00000511040 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
DDX41-212ENST00000511040 CABP4P57796 275 aa18.7■□□□□ 0.58
DDX41-212ENST00000511040 SLC15A2Q16348 729 aa18.7■□□□□ 0.58
DDX41-212ENST00000511040 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
DDX41-212ENST00000511040 PDGFDQ9GZP0 370 aaPredicted RBP18.7■□□□□ 0.58
DDX41-212ENST00000511040 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
DDX41-212ENST00000511040 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
DDX41-212ENST00000511040 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
DDX41-212ENST00000511040 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
DDX41-212ENST00000511040 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
DDX41-212ENST00000511040 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
DDX41-212ENST00000511040 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
DDX41-212ENST00000511040 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
DDX41-212ENST00000511040 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
DDX41-212ENST00000511040 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
DDX41-212ENST00000511040 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
DDX41-212ENST00000511040 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
DDX41-212ENST00000511040 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.57
DDX41-212ENST00000511040 FCHSD2O94868 740 aa18.64■□□□□ 0.57
DDX41-212ENST00000511040 SIK1P57059 783 aa18.64■□□□□ 0.57
DDX41-212ENST00000511040 PRKRIP1Q9H875 184 aaPredicted RBP18.64■□□□□ 0.57
DDX41-212ENST00000511040 CASZ1Q86V15 1759 aa18.63■□□□□ 0.57
DDX41-212ENST00000511040 ZBTB7AO95365 584 aa18.63■□□□□ 0.57
DDX41-212ENST00000511040 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms