RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 DDB1Q16531 1140 aa13.95□□□□□ -0.18
NR1I3-227ENST00000510951 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
NR1I3-227ENST00000510951 CDCA7Q9BWT1 371 aaPredicted RBP13.95□□□□□ -0.18
NR1I3-227ENST00000510951 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
NR1I3-227ENST00000510951 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
NR1I3-227ENST00000510951 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
NR1I3-227ENST00000510951 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
NR1I3-227ENST00000510951 KDRP35968 1356 aa13.94□□□□□ -0.18
NR1I3-227ENST00000510951 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
NR1I3-227ENST00000510951 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
NR1I3-227ENST00000510951 PDE3BQ13370 1112 aa13.93□□□□□ -0.18
NR1I3-227ENST00000510951 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
NR1I3-227ENST00000510951 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
NR1I3-227ENST00000510951 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
NR1I3-227ENST00000510951 DLG5Q8TDM6 1919 aa13.92□□□□□ -0.18
NR1I3-227ENST00000510951 EP400Q96L91 3159 aa13.91□□□□□ -0.18
NR1I3-227ENST00000510951 EXOC5O00471 708 aa13.91□□□□□ -0.18
NR1I3-227ENST00000510951 ZCRB1Q8TBF4 217 aaKnown RBP13.9□□□□□ -0.18
NR1I3-227ENST00000510951 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
NR1I3-227ENST00000510951 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
NR1I3-227ENST00000510951 ITGB4P16144 1822 aa13.9□□□□□ -0.18
NR1I3-227ENST00000510951 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
NR1I3-227ENST00000510951 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
NR1I3-227ENST00000510951 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
NR1I3-227ENST00000510951 MARCH10Q8NA82 808 aaPredicted RBP13.89□□□□□ -0.19
NR1I3-227ENST00000510951 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
NR1I3-227ENST00000510951 PCDH11XQ9BZA7 1347 aa13.89□□□□□ -0.19
NR1I3-227ENST00000510951 PCDH11YQ9BZA8 1340 aa13.89□□□□□ -0.19
NR1I3-227ENST00000510951 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
NR1I3-227ENST00000510951 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
NR1I3-227ENST00000510951 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
NR1I3-227ENST00000510951 BTAF1O14981 1849 aa13.87□□□□□ -0.19
NR1I3-227ENST00000510951 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
NR1I3-227ENST00000510951 CYP27B1O15528 508 aa13.86□□□□□ -0.19
NR1I3-227ENST00000510951 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
NR1I3-227ENST00000510951 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
NR1I3-227ENST00000510951 MSH5O43196 834 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 FCHSD2O94868 740 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 FAM196AQ6ZSG2 479 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 MIER1Q8N108 512 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
NR1I3-227ENST00000510951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
NR1I3-227ENST00000510951 PHKG2P15735 406 aa13.83□□□□□ -0.2
NR1I3-227ENST00000510951 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
NR1I3-227ENST00000510951 C1orf141Q5JVX7 400 aa13.83□□□□□ -0.2
NR1I3-227ENST00000510951 ADAMTS8Q9UP79 889 aa13.83□□□□□ -0.2
NR1I3-227ENST00000510951 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
NR1I3-227ENST00000510951 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
NR1I3-227ENST00000510951 TRIM37O94972 964 aa13.82□□□□□ -0.2
NR1I3-227ENST00000510951 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
NR1I3-227ENST00000510951 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
NR1I3-227ENST00000510951 BCL9O00512 1426 aa13.81□□□□□ -0.2
NR1I3-227ENST00000510951 NEFMP07197 916 aa13.81□□□□□ -0.2
NR1I3-227ENST00000510951 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
NR1I3-227ENST00000510951 PLEKHF1Q96S99 279 aa13.81□□□□□ -0.2
NR1I3-227ENST00000510951 MAP3K5Q99683 1374 aa13.81□□□□□ -0.2
NR1I3-227ENST00000510951 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
NR1I3-227ENST00000510951 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
NR1I3-227ENST00000510951 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
NR1I3-227ENST00000510951 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
NR1I3-227ENST00000510951 KCNQ2O43526 872 aa13.79□□□□□ -0.2
NR1I3-227ENST00000510951 AKAP4Q5JQC9 854 aa13.79□□□□□ -0.2
NR1I3-227ENST00000510951 MPRIPQ6WCQ1 1025 aa13.79□□□□□ -0.2
NR1I3-227ENST00000510951 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
NR1I3-227ENST00000510951 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
NR1I3-227ENST00000510951 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
NR1I3-227ENST00000510951 RGPD4Q7Z3J3 1758 aa13.78□□□□□ -0.2
NR1I3-227ENST00000510951 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
NR1I3-227ENST00000510951 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
NR1I3-227ENST00000510951 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
NR1I3-227ENST00000510951 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
NR1I3-227ENST00000510951 LY75O60449 1722 aa13.77□□□□□ -0.21
NR1I3-227ENST00000510951 HSP90AB1P08238 724 aaKnown RBP13.77□□□□□ -0.21
NR1I3-227ENST00000510951 MRC1P22897 1456 aa13.77□□□□□ -0.21
NR1I3-227ENST00000510951 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
NR1I3-227ENST00000510951 RUNDC1Q96C34 613 aa13.77□□□□□ -0.21
NR1I3-227ENST00000510951 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
NR1I3-227ENST00000510951 RREB1Q92766 1687 aa13.76□□□□□ -0.21
NR1I3-227ENST00000510951 PAPPAQ13219 1627 aa13.76□□□□□ -0.21
NR1I3-227ENST00000510951 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
NR1I3-227ENST00000510951 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
NR1I3-227ENST00000510951 NFE2L2Q16236 605 aa13.76□□□□□ -0.21
NR1I3-227ENST00000510951 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
NR1I3-227ENST00000510951 RNMTO43148 476 aaKnown RBP13.75□□□□□ -0.21
NR1I3-227ENST00000510951 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
NR1I3-227ENST00000510951 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-227ENST00000510951 LGR6Q9HBX8 967 aa13.75□□□□□ -0.21
NR1I3-227ENST00000510951 NUP188Q5SRE5 1749 aa13.75□□□□□ -0.21
NR1I3-227ENST00000510951 SOCS7O14512 581 aa13.74□□□□□ -0.21
NR1I3-227ENST00000510951 APBA3O96018 575 aa13.74□□□□□ -0.21
NR1I3-227ENST00000510951 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
NR1I3-227ENST00000510951 MCM10Q7L590 875 aa13.74□□□□□ -0.21
NR1I3-227ENST00000510951 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
NR1I3-227ENST00000510951 TMOD3Q9NYL9 352 aa13.74□□□□□ -0.21
NR1I3-227ENST00000510951 APAF1O14727 1248 aa13.73□□□□□ -0.21
NR1I3-227ENST00000510951 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
NR1I3-227ENST00000510951 CABP4P57796 275 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms