RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
CALCOCO2-217ENST00000510356 USP35Q9P2H5 1018 aa12.3□□□□□ -0.44
CALCOCO2-217ENST00000510356 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
CALCOCO2-217ENST00000510356 RREB1Q92766 1687 aa12.29□□□□□ -0.44
CALCOCO2-217ENST00000510356 KIF3CO14782 793 aa12.29□□□□□ -0.44
CALCOCO2-217ENST00000510356 MFSD10Q14728 455 aa12.29□□□□□ -0.44
CALCOCO2-217ENST00000510356 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
CALCOCO2-217ENST00000510356 SAFB2Q14151 953 aaKnown RBP eCLIP12.28□□□□□ -0.44
CALCOCO2-217ENST00000510356 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
CALCOCO2-217ENST00000510356 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
CALCOCO2-217ENST00000510356 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
CALCOCO2-217ENST00000510356 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 ZC3H6P61129 1189 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 DSG2Q14126 1118 aa12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 CHRNA2Q15822 529 aa12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 MAMSTRQ6ZN01 415 aa12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 SCUBE2Q9NQ36 999 aa12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 SPATA31E1Q6ZUB1 1445 aa12.26□□□□□ -0.45
CALCOCO2-217ENST00000510356 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-217ENST00000510356 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
CALCOCO2-217ENST00000510356 SSH2Q76I76 1423 aa12.25□□□□□ -0.45
CALCOCO2-217ENST00000510356 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 PTGER2P43116 358 aa12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 FOXK1P85037 733 aa12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 ALS2Q96Q42 1657 aa12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 FHDC1Q9C0D6 1143 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 STK32BQ9NY57 414 aa12.24□□□□□ -0.45
CALCOCO2-217ENST00000510356 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 OVOS2A0A0G2JMS6 1433 aa12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 CFAP70Q5T0N1 1121 aa12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 LARP1Q6PKG0 1096 aaKnown RBP12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 MTFR1LQ9H019 292 aa12.23□□□□□ -0.45
CALCOCO2-217ENST00000510356 PLPP6Q8IY26 295 aa12.22□□□□□ -0.45
CALCOCO2-217ENST00000510356 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
CALCOCO2-217ENST00000510356 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
CALCOCO2-217ENST00000510356 ATP7BP35670 1465 aa12.21□□□□□ -0.45
CALCOCO2-217ENST00000510356 E2F4Q16254 413 aa12.21□□□□□ -0.45
CALCOCO2-217ENST00000510356 SLAIN1Q8ND83 568 aa12.21□□□□□ -0.45
CALCOCO2-217ENST00000510356 PRR36Q9H6K5 1346 aa12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 SLC15A2Q16348 729 aa12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 DDB1Q16531 1140 aa12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 GPR162Q16538 588 aa12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 TULP4Q9NRJ4 1543 aa12.2□□□□□ -0.46
CALCOCO2-217ENST00000510356 CPDO75976 1380 aa12.19□□□□□ -0.46
CALCOCO2-217ENST00000510356 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO2-217ENST00000510356 ARXQ96QS3 562 aa12.19□□□□□ -0.46
CALCOCO2-217ENST00000510356 RGPD3A6NKT7 1758 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO2-217ENST00000510356 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
CALCOCO2-217ENST00000510356 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
CALCOCO2-217ENST00000510356 NLRP13Q86W25 1043 aa12.18□□□□□ -0.46
CALCOCO2-217ENST00000510356 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
CALCOCO2-217ENST00000510356 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
CALCOCO2-217ENST00000510356 CHD4Q14839 1912 aa12.17□□□□□ -0.46
CALCOCO2-217ENST00000510356 TXNRD1Q16881 649 aa12.17□□□□□ -0.46
CALCOCO2-217ENST00000510356 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
CALCOCO2-217ENST00000510356 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
CALCOCO2-217ENST00000510356 PDGFDQ9GZP0 370 aaPredicted RBP12.17□□□□□ -0.46
CALCOCO2-217ENST00000510356 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
CALCOCO2-217ENST00000510356 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
CALCOCO2-217ENST00000510356 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
CALCOCO2-217ENST00000510356 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
CALCOCO2-217ENST00000510356 BCL9O00512 1426 aa12.16□□□□□ -0.46
CALCOCO2-217ENST00000510356 CRB1P82279 1406 aa12.16□□□□□ -0.46
CALCOCO2-217ENST00000510356 CAMK2BQ13554 666 aa12.15□□□□□ -0.46
CALCOCO2-217ENST00000510356 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
CALCOCO2-217ENST00000510356 MYOM1P52179 1685 aa12.15□□□□□ -0.46
CALCOCO2-217ENST00000510356 GCP02774 474 aa12.14□□□□□ -0.47
CALCOCO2-217ENST00000510356 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
CALCOCO2-217ENST00000510356 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
CALCOCO2-217ENST00000510356 USP19O94966 1318 aa12.13□□□□□ -0.47
CALCOCO2-217ENST00000510356 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
CALCOCO2-217ENST00000510356 POLR3AO14802 1390 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO2-217ENST00000510356 AATKQ6ZMQ8 1374 aa12.13□□□□□ -0.47
CALCOCO2-217ENST00000510356 PHRF1Q9P1Y6 1649 aaKnown RBP12.12□□□□□ -0.47
CALCOCO2-217ENST00000510356 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
CALCOCO2-217ENST00000510356 POLD1P28340 1107 aa12.12□□□□□ -0.47
CALCOCO2-217ENST00000510356 SLC16A10Q8TF71 515 aa12.12□□□□□ -0.47
CALCOCO2-217ENST00000510356 COL5A2P05997 1499 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO2-217ENST00000510356 ACEP12821 1306 aa12.11□□□□□ -0.47
CALCOCO2-217ENST00000510356 BRD4O60885 1362 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO2-217ENST00000510356 EXOC5O00471 708 aa12.11□□□□□ -0.47
CALCOCO2-217ENST00000510356 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
CALCOCO2-217ENST00000510356 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
CALCOCO2-217ENST00000510356 MARCH10Q8NA82 808 aaPredicted RBP12.1□□□□□ -0.47
CALCOCO2-217ENST00000510356 CDK19Q9BWU1 502 aa12.1□□□□□ -0.47
CALCOCO2-217ENST00000510356 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
CALCOCO2-217ENST00000510356 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
CALCOCO2-217ENST00000510356 ITSN1Q15811 1721 aa12.09□□□□□ -0.47
CALCOCO2-217ENST00000510356 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
CALCOCO2-217ENST00000510356 HSPA6P17066 643 aa12.08□□□□□ -0.48
CALCOCO2-217ENST00000510356 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
CALCOCO2-217ENST00000510356 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms