RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 ARHGAP9Q9BRR9 750 aa3.69□□□□□ -1.82
CAST-226ENST00000509529 CDV3Q9UKY7 258 aaKnown RBP3.69□□□□□ -1.82
CAST-226ENST00000509529 C1QTNF9BB2RNN3 333 aa3.68□□□□□ -1.82
CAST-226ENST00000509529 LILRA1O75019 489 aa3.68□□□□□ -1.82
CAST-226ENST00000509529 PTGIRP43119 386 aa3.68□□□□□ -1.82
CAST-226ENST00000509529 AMHR2Q16671 573 aa3.68□□□□□ -1.82
CAST-226ENST00000509529 ZMYM1Q5SVZ6 1142 aa3.68□□□□□ -1.82
CAST-226ENST00000509529 C1orf229Q6ZS94 237 aaPredicted RBP3.68□□□□□ -1.82
CAST-226ENST00000509529 OXCT2Q9BYC2 517 aaPredicted RBP3.68□□□□□ -1.82
CAST-226ENST00000509529 SUV39H2Q9H5I1 410 aa3.68□□□□□ -1.82
CAST-226ENST00000509529 CD163Q86VB7 1156 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 TRERF1Q96PN7 1200 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 LIMD1Q9UGP4 676 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 NUTM2BA6NNL0 878 aaPredicted RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 NUTM2EB1AL46 878 aaPredicted RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 CHRNA4P43681 627 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 RAB15P59190 212 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 NUTM2DQ5VT03 806 aaPredicted RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 NUTM2AQ8IVF1 878 aaPredicted RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 HELBQ8NG08 1087 aaPredicted RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 SEMA6BQ9H3T3 888 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 RRAGCQ9HB90 399 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 TULP1O00294 542 aaPredicted RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 PDXDC2PQ6P474 469 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 OCSTAMPQ9BR26 566 aa3.67□□□□□ -1.82
CAST-226ENST00000509529 NSFL1CQ9UNZ2 370 aaKnown RBP3.67□□□□□ -1.82
CAST-226ENST00000509529 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
CAST-226ENST00000509529 HOXB4P17483 251 aaPredicted RBP3.66□□□□□ -1.82
CAST-226ENST00000509529 RNF144AP50876 292 aaPredicted RBP3.66□□□□□ -1.82
CAST-226ENST00000509529 ZBTB33Q86T24 672 aa3.66□□□□□ -1.82
CAST-226ENST00000509529 GAS2L1Q99501 681 aaPredicted RBP3.66□□□□□ -1.82
CAST-226ENST00000509529 BTBD11A6QL63 1104 aa3.66□□□□□ -1.82
CAST-226ENST00000509529 H7C1W4 665 aa3.66□□□□□ -1.82
CAST-226ENST00000509529 LILRB3O75022 631 aa3.66□□□□□ -1.82
CAST-226ENST00000509529 DYRK1BQ9Y463 629 aa3.66□□□□□ -1.82
CAST-226ENST00000509529 ERVH48-1M5A8F1 160 aa3.65□□□□□ -1.82
CAST-226ENST00000509529 FOXD4L6Q3SYB3 417 aaPredicted RBP3.65□□□□□ -1.82
CAST-226ENST00000509529 FOXD4L3Q6VB84 417 aaPredicted RBP3.65□□□□□ -1.82
CAST-226ENST00000509529 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.82
CAST-226ENST00000509529 DOC2BQ14184 412 aa3.65□□□□□ -1.83
CAST-226ENST00000509529 RTL5Q5HYW3 569 aaPredicted RBP3.65□□□□□ -1.83
CAST-226ENST00000509529 LINC00114Q6XXX2 140 aa3.65□□□□□ -1.83
CAST-226ENST00000509529 PARP9Q8IXQ6 854 aa3.65□□□□□ -1.83
CAST-226ENST00000509529 MAP2K3P46734 347 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 NBPF20Q3BBV1 942 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 FKBPLQ9UIM3 349 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 SCO2A0A1W2PP80 73 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 EDARADDQ8WWZ3 215 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 POU4F2Q12837 409 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 MYSM1Q5VVJ2 828 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 ADAM32Q8TC27 787 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 KLRG1Q96E93 195 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 CYLDQ9NQC7 956 aa3.64□□□□□ -1.83
CAST-226ENST00000509529 THBS1P07996 1170 aa3.63□□□□□ -1.83
CAST-226ENST00000509529 NUCKS1Q9H1E3 243 aaKnown RBP3.63□□□□□ -1.83
CAST-226ENST00000509529 CTDSPL2Q05D32 466 aa3.63□□□□□ -1.83
CAST-226ENST00000509529 MEN1O00255 615 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 GNB5O14775 395 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 AMPD1P23109 780 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 GPC1P35052 558 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 TUSC1Q2TAM9 212 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 GDF2Q9UK05 429 aaPredicted RBP3.62□□□□□ -1.83
CAST-226ENST00000509529 ZEB1P37275 1124 aaPredicted RBP3.62□□□□□ -1.83
CAST-226ENST00000509529 NBPF10Q6P3W6 841 aaKnown RBP3.62□□□□□ -1.83
CAST-226ENST00000509529 NBPF15Q8N660 670 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 LRRN4Q8WUT4 740 aa3.62□□□□□ -1.83
CAST-226ENST00000509529 ATP5J2-PTCD1G3V325 749 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 PTK2Q05397 1052 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 BARGINQ6ZT62 677 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 GOLGA6L1Q8N7Z2 621 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 ESPNB1AK53 854 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 DGKGP49619 791 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 NR6A1Q15406 480 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 SLC27A3Q5K4L6 730 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 CFHR5Q9BXR6 569 aa3.61□□□□□ -1.83
CAST-226ENST00000509529 ZC3H4Q9UPT8 1303 aaKnown RBP3.61□□□□□ -1.83
CAST-226ENST00000509529 A0A1W2PRU2 124 aa3.6□□□□□ -1.83
CAST-226ENST00000509529 ZFP64Q9NPA5 681 aa3.6□□□□□ -1.83
CAST-226ENST00000509529 F11P03951 625 aa3.6□□□□□ -1.83
CAST-226ENST00000509529 ARTNQ5T4W7 220 aa3.6□□□□□ -1.83
CAST-226ENST00000509529 SLCO4C1Q6ZQN7 724 aa3.6□□□□□ -1.83
CAST-226ENST00000509529 TIMMDC1Q9NPL8 285 aa3.6□□□□□ -1.83
CAST-226ENST00000509529 PIK3R2O00459 728 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 C2CD2LO14523 706 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 RSPO4Q2I0M5 234 aaPredicted RBP3.59□□□□□ -1.83
CAST-226ENST00000509529 GPAMQ9HCL2 828 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 NOP53Q9NZM5 478 aaKnown RBP3.59□□□□□ -1.83
CAST-226ENST00000509529 GGA1Q9UJY5 639 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 KDM2AQ9Y2K7 1162 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 GPSM3Q9Y4H4 160 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 MYO15BQ96JP2 1530 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 UBAP2LQ14157 1087 aaKnown RBP3.59□□□□□ -1.83
CAST-226ENST00000509529 DZIP3Q86Y13 1208 aaKnown RBP3.59□□□□□ -1.83
CAST-226ENST00000509529 GRIP2Q9C0E4 1043 aa3.59□□□□□ -1.83
CAST-226ENST00000509529 SPATA31C2B4DYI2 1134 aa3.59□□□□□ -1.84
CAST-226ENST00000509529 ZMYND10O75800 440 aa3.59□□□□□ -1.84
CAST-226ENST00000509529 GATA4P43694 442 aa3.59□□□□□ -1.84
CAST-226ENST00000509529 CLK2P49760 499 aaKnown RBP3.59□□□□□ -1.84
CAST-226ENST00000509529 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.59□□□□□ -1.84
CAST-226ENST00000509529 BTBD6Q96KE9 485 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms