RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 BCL9O00512 1426 aa27.21■■□□□ 1.95
HOXC6-204ENST00000509328 DIAPH1O60610 1272 aaKnown RBP27.2■■□□□ 1.94
HOXC6-204ENST00000509328 TNS1Q9HBL0 1735 aaKnown RBP27.2■■□□□ 1.94
HOXC6-204ENST00000509328 RALBP1Q15311 655 aa27.19■■□□□ 1.94
HOXC6-204ENST00000509328 CFAP53Q96M91 514 aa27.19■■□□□ 1.94
HOXC6-204ENST00000509328 SF3B2Q13435 895 aaKnown RBP27.18■■□□□ 1.94
HOXC6-204ENST00000509328 DDX54Q8TDD1 881 aaKnown RBP27.17■■□□□ 1.94
HOXC6-204ENST00000509328 TRIM37O94972 964 aa27.16■■□□□ 1.94
HOXC6-204ENST00000509328 PLEKHG2Q9H7P9 1386 aa27.16■■□□□ 1.94
HOXC6-204ENST00000509328 KAT6BQ8WYB5 2073 aa27.16■■□□□ 1.94
HOXC6-204ENST00000509328 KDRP35968 1356 aa27.14■■□□□ 1.94
HOXC6-204ENST00000509328 SULT6B1Q6IMI4 303 aa27.14■■□□□ 1.94
HOXC6-204ENST00000509328 PCDH11XQ9BZA7 1347 aa27.14■■□□□ 1.93
HOXC6-204ENST00000509328 PCDH11YQ9BZA8 1340 aa27.14■■□□□ 1.93
HOXC6-204ENST00000509328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.13■■□□□ 1.93
HOXC6-204ENST00000509328 SPG7Q9UQ90 795 aa27.13■■□□□ 1.93
HOXC6-204ENST00000509328 AEBP1Q8IUX7 1158 aa27.12■■□□□ 1.93
HOXC6-204ENST00000509328 NHSQ6T4R5 1651 aa27.11■■□□□ 1.93
HOXC6-204ENST00000509328 BAG6P46379 1132 aa27.09■■□□□ 1.93
HOXC6-204ENST00000509328 DOT1LQ8TEK3 1739 aa27.09■■□□□ 1.93
HOXC6-204ENST00000509328 U2SURPO15042 1029 aaKnown RBP27.08■■□□□ 1.93
HOXC6-204ENST00000509328 BCL11BQ9C0K0 894 aaPredicted RBP27.08■■□□□ 1.93
HOXC6-204ENST00000509328 NUDCQ9Y266 331 aa27.08■■□□□ 1.93
HOXC6-204ENST00000509328 MYBBP1AQ9BQG0 1328 aaKnown RBP27.08■■□□□ 1.93
HOXC6-204ENST00000509328 CYP27B1O15528 508 aa27.07■■□□□ 1.92
HOXC6-204ENST00000509328 APBA3O96018 575 aa27.06■■□□□ 1.92
HOXC6-204ENST00000509328 HMOX1P09601 288 aa27.06■■□□□ 1.92
HOXC6-204ENST00000509328 PLEKHO1Q53GL0 409 aaPredicted RBP27.06■■□□□ 1.92
HOXC6-204ENST00000509328 DEFB132Q7Z7B7 95 aa27.06■■□□□ 1.92
HOXC6-204ENST00000509328 PRKRIP1Q9H875 184 aaPredicted RBP27.06■■□□□ 1.92
HOXC6-204ENST00000509328 AMOTQ4VCS5 1084 aa27.05■■□□□ 1.92
HOXC6-204ENST00000509328 ACSBG1Q96GR2 724 aa27.05■■□□□ 1.92
HOXC6-204ENST00000509328 RGPD3A6NKT7 1758 aaPredicted RBP27.04■■□□□ 1.92
HOXC6-204ENST00000509328 RGPD4Q7Z3J3 1758 aa27.04■■□□□ 1.92
HOXC6-204ENST00000509328 BTAF1O14981 1849 aa27.04■■□□□ 1.92
HOXC6-204ENST00000509328 KCNQ2O43526 872 aa27.02■■□□□ 1.92
HOXC6-204ENST00000509328 PTF1AQ7RTS3 328 aa27.02■■□□□ 1.92
HOXC6-204ENST00000509328 IFNL2Q8IZJ0 200 aa27.02■■□□□ 1.92
HOXC6-204ENST00000509328 EN1Q05925 392 aaPredicted RBP27.01■■□□□ 1.91
HOXC6-204ENST00000509328 NKX1-1Q15270 411 aaPredicted RBP27.01■■□□□ 1.91
HOXC6-204ENST00000509328 ITGB4P16144 1822 aa27■■□□□ 1.91
HOXC6-204ENST00000509328 TOGARAM1Q9Y4F4 1720 aa27■■□□□ 1.91
HOXC6-204ENST00000509328 PHKG2P15735 406 aa27■■□□□ 1.91
HOXC6-204ENST00000509328 ZNF530Q6P9A1 599 aaPredicted RBP26.99■■□□□ 1.91
HOXC6-204ENST00000509328 U2AF1L5P0DN76 240 aaPredicted RBP26.98■■□□□ 1.91
HOXC6-204ENST00000509328 U2AF1Q01081 240 aaKnown RBP eCLIP26.98■■□□□ 1.91
HOXC6-204ENST00000509328 PLSCR1O15162 318 aa26.97■■□□□ 1.91
HOXC6-204ENST00000509328 PRIM1P49642 420 aaKnown RBP26.97■■□□□ 1.91
HOXC6-204ENST00000509328 CAMKK2Q96RR4 588 aa26.97■■□□□ 1.91
HOXC6-204ENST00000509328 RREB1Q92766 1687 aa26.96■■□□□ 1.91
HOXC6-204ENST00000509328 SYTL4Q96C24 671 aaPredicted RBP26.96■■□□□ 1.91
HOXC6-204ENST00000509328 HSP90AB1P08238 724 aaKnown RBP26.95■■□□□ 1.9
HOXC6-204ENST00000509328 EZH2Q15910 746 aaKnown RBP26.95■■□□□ 1.9
HOXC6-204ENST00000509328 C1orf141Q5JVX7 400 aa26.95■■□□□ 1.9
HOXC6-204ENST00000509328 RSPH6AQ9H0K4 717 aa26.95■■□□□ 1.9
HOXC6-204ENST00000509328 VIRMAQ69YN4 1812 aaKnown RBP26.95■■□□□ 1.9
HOXC6-204ENST00000509328 FCHSD2O94868 740 aa26.93■■□□□ 1.9
HOXC6-204ENST00000509328 SCN11AQ9UI33 1791 aa26.92■■□□□ 1.9
HOXC6-204ENST00000509328 PRKAR2BP31323 418 aa26.92■■□□□ 1.9
HOXC6-204ENST00000509328 NUP188Q5SRE5 1749 aa26.91■■□□□ 1.9
HOXC6-204ENST00000509328 ANP32CO43423 234 aa26.91■■□□□ 1.9
HOXC6-204ENST00000509328 MTHFSDQ2M296 383 aaKnown RBP26.91■■□□□ 1.9
HOXC6-204ENST00000509328 DCAF5Q96JK2 942 aa26.91■■□□□ 1.9
HOXC6-204ENST00000509328 AKAP4Q5JQC9 854 aa26.9■■□□□ 1.9
HOXC6-204ENST00000509328 MPRIPQ6WCQ1 1025 aa26.88■■□□□ 1.89
HOXC6-204ENST00000509328 GAS2L2Q8NHY3 880 aa26.88■■□□□ 1.89
HOXC6-204ENST00000509328 KDM6AO15550 1401 aaPredicted RBP26.88■■□□□ 1.89
HOXC6-204ENST00000509328 LY75O60449 1722 aa26.87■■□□□ 1.89
HOXC6-204ENST00000509328 ERVV-2B6SEH9 535 aa26.86■■□□□ 1.89
HOXC6-204ENST00000509328 PHACTR3Q96KR7 559 aa26.86■■□□□ 1.89
HOXC6-204ENST00000509328 PNNQ9H307 717 aaKnown RBP26.85■■□□□ 1.89
HOXC6-204ENST00000509328 TMOD3Q9NYL9 352 aa26.85■■□□□ 1.89
HOXC6-204ENST00000509328 ADAMTS7Q9UKP4 1686 aa26.85■■□□□ 1.89
HOXC6-204ENST00000509328 TXNRD1Q16881 649 aa26.84■■□□□ 1.89
HOXC6-204ENST00000509328 PIGBQ92521 554 aa26.84■■□□□ 1.89
HOXC6-204ENST00000509328 PROM2Q8N271 834 aa26.83■■□□□ 1.89
HOXC6-204ENST00000509328 NEFMP07197 916 aa26.82■■□□□ 1.88
HOXC6-204ENST00000509328 MAP3K5Q99683 1374 aa26.82■■□□□ 1.88
HOXC6-204ENST00000509328 WDR43Q15061 677 aaKnown RBP eCLIP26.81■■□□□ 1.88
HOXC6-204ENST00000509328 GNAT3A8MTJ3 354 aa26.8■■□□□ 1.88
HOXC6-204ENST00000509328 CABP4P57796 275 aa26.8■■□□□ 1.88
HOXC6-204ENST00000509328 PLEKHF1Q96S99 279 aa26.8■■□□□ 1.88
HOXC6-204ENST00000509328 DLG5Q8TDM6 1919 aa26.8■■□□□ 1.88
HOXC6-204ENST00000509328 RNMTO43148 476 aaKnown RBP26.79■■□□□ 1.88
HOXC6-204ENST00000509328 SMARCC1Q92922 1105 aaPredicted RBP26.79■■□□□ 1.88
HOXC6-204ENST00000509328 SLC27A3Q5K4L6 730 aa26.78■■□□□ 1.88
HOXC6-204ENST00000509328 LGR6Q9HBX8 967 aa26.78■■□□□ 1.88
HOXC6-204ENST00000509328 MRC1P22897 1456 aa26.77■■□□□ 1.88
HOXC6-204ENST00000509328 PALLDQ8WX93 1383 aa26.77■■□□□ 1.88
HOXC6-204ENST00000509328 NBPF14Q5TI25 921 aa26.77■■□□□ 1.88
HOXC6-204ENST00000509328 MAPK8IP3Q9UPT6 1336 aa26.76■■□□□ 1.87
HOXC6-204ENST00000509328 NFATC2IPQ8NCF5 419 aa26.75■■□□□ 1.87
HOXC6-204ENST00000509328 SLC52A2Q9HAB3 445 aa26.74■■□□□ 1.87
HOXC6-204ENST00000509328 ASAP1Q9ULH1 1129 aa26.74■■□□□ 1.87
HOXC6-204ENST00000509328 PAPPAQ13219 1627 aa26.74■■□□□ 1.87
HOXC6-204ENST00000509328 CCDC184Q52MB2 194 aa26.73■■□□□ 1.87
HOXC6-204ENST00000509328 ATG3Q9NT62 314 aa26.73■■□□□ 1.87
HOXC6-204ENST00000509328 LRRC4BQ9NT99 713 aa26.73■■□□□ 1.87
HOXC6-204ENST00000509328 CCNL1Q9UK58 526 aaPredicted RBP26.73■■□□□ 1.87
HOXC6-204ENST00000509328 ADAMTS8Q9UP79 889 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms