RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 ATF3P18847 181 aa6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 RXRBP28702 533 aa6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 SSTR3P32745 418 aaPredicted RBP6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 ADGRD1Q6QNK2 874 aa6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 REPIN1Q9BWE0 567 aaKnown RBP6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 NRXN3Q9Y4C0 1643 aa6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 ASXL1Q8IXJ9 1541 aa6.76□□□□□ -1.33
CALCOCO2-213ENST00000509112 PPP1R15AO75807 674 aaPredicted RBP6.75□□□□□ -1.33
CALCOCO2-213ENST00000509112 FAM161AQ3B820 660 aa6.75□□□□□ -1.33
CALCOCO2-213ENST00000509112 MEX3CQ5U5Q3 659 aaKnown RBP6.75□□□□□ -1.33
CALCOCO2-213ENST00000509112 RSPH6AQ9H0K4 717 aa6.75□□□□□ -1.33
CALCOCO2-213ENST00000509112 MST1RQ04912 1400 aa6.75□□□□□ -1.33
CALCOCO2-213ENST00000509112 ROCK1Q13464 1354 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 C3orf80F5H4A9 247 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 MS4A1P11836 297 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 BRINP3Q76B58 766 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 LRRC59Q96AG4 307 aaKnown RBP6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 FAM117AQ9C073 453 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 PRAG1Q86YV5 1406 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 PTPRUQ92729 1446 aa6.74□□□□□ -1.33
CALCOCO2-213ENST00000509112 CD46P15529 392 aa6.73□□□□□ -1.33
CALCOCO2-213ENST00000509112 GJA5P36382 358 aa6.73□□□□□ -1.33
CALCOCO2-213ENST00000509112 RBM6P78332 1123 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-213ENST00000509112 SLF2Q8IX21 1173 aa6.73□□□□□ -1.33
CALCOCO2-213ENST00000509112 MRPL50Q8N5N7 158 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-213ENST00000509112 COL22A1Q8NFW1 1626 aaPredicted RBP6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 PLEKHG3A1L390 1219 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 ERICH6Q7L0X2 663 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 TRIM52Q96A61 297 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 PCDH10Q9P2E7 1040 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 CHIC2Q9UKJ5 165 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 AMOTL2Q9Y2J4 779 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 RGS12O14924 1447 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 ADGRL3Q9HAR2 1447 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 SPHKAPQ2M3C7 1700 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 AFF2P51816 1311 aa6.72□□□□□ -1.33
CALCOCO2-213ENST00000509112 PNPLA6Q8IY17 1366 aa6.71□□□□□ -1.33
CALCOCO2-213ENST00000509112 NALCNQ8IZF0 1738 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 PTCH1Q13635 1447 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 USP46P62068 366 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 SH3D19Q5HYK7 790 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 C14orf37Q86TY3 774 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 NGLY1Q96IV0 654 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 ZFRQ96KR1 1074 aaKnown RBP6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
CALCOCO2-213ENST00000509112 ATAD2Q6PL18 1390 aa6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 SMAPO00193 183 aa6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 CCDC125Q86Z20 511 aa6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 IL27Q8NEV9 243 aa6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 STAC3Q96MF2 364 aa6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 SEPT9Q9UHD8 586 aaPredicted RBP6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 MARF1Q9Y4F3 1742 aaKnown RBP6.7□□□□□ -1.34
CALCOCO2-213ENST00000509112 SKIV2LQ15477 1246 aaKnown RBP6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 SWT1Q5T5J6 900 aaKnown RBP6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 POTEGQ6S5H5 508 aa6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 FNBP4Q8N3X1 1017 aaPredicted RBP6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 PRR14Q9BWN1 585 aa6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 QTRT2Q9H974 415 aaKnown RBP6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 NEXMIFQ5QGS0 1516 aa6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 SOS2Q07890 1332 aaPredicted RBP6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 KIF1BO60333 1816 aa6.69□□□□□ -1.34
CALCOCO2-213ENST00000509112 C1orf167Q5SNV9 1468 aa6.68□□□□□ -1.34
CALCOCO2-213ENST00000509112 POTEMA6NI47 508 aa6.68□□□□□ -1.34
CALCOCO2-213ENST00000509112 ANKK1Q8NFD2 765 aa6.68□□□□□ -1.34
CALCOCO2-213ENST00000509112 TRPC5Q9UL62 973 aaPredicted RBP6.68□□□□□ -1.34
CALCOCO2-213ENST00000509112 METP08581 1390 aa6.68□□□□□ -1.34
CALCOCO2-213ENST00000509112 ATRNO75882 1429 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 LOC105371045A0A1W2PR82 267 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 NUTM2BA6NNL0 878 aaPredicted RBP6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 NUTM2EB1AL46 878 aaPredicted RBP6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 GCGRP47871 477 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 ANKRD13DQ6ZTN6 518 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 SAMD7Q7Z3H4 446 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 NUTM2AQ8IVF1 878 aaPredicted RBP6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 NLRP7Q8WX94 980 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 LRCH3Q96II8 777 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 NUP155O75694 1391 aa6.67□□□□□ -1.34
CALCOCO2-213ENST00000509112 SOWAHBA6NEL2 793 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 GOLGA8CPA6NN73 597 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 NYAP1Q6ZVC0 841 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 CDAN1Q8IWY9 1227 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 HFM1A2PYH4 1435 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 MYOM2P54296 1465 aa6.66□□□□□ -1.34
CALCOCO2-213ENST00000509112 CDC42BPGQ6DT37 1551 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 CLTCL1P53675 1640 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 KDM4AO75164 1064 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 SLC10A3P09131 477 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 FAM50AQ14320 339 aaKnown RBP6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 KMT5BQ4FZB7 885 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 GRIPAP1Q4V328 841 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 MYSM1Q5VVJ2 828 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 NUTM1Q86Y26 1132 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms