RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 GLI3P10071 1580 aa11.91□□□□□ -0.5
TRIO-209ENST00000507714 RGPD1P0DJD0 1748 aa11.91□□□□□ -0.5
TRIO-209ENST00000507714 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
TRIO-209ENST00000507714 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
TRIO-209ENST00000507714 PLEKHO1Q53GL0 409 aaPredicted RBP11.9□□□□□ -0.5
TRIO-209ENST00000507714 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
TRIO-209ENST00000507714 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
TRIO-209ENST00000507714 KDRP35968 1356 aa11.9□□□□□ -0.5
TRIO-209ENST00000507714 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
TRIO-209ENST00000507714 ONECUT3O60422 494 aaPredicted RBP11.89□□□□□ -0.51
TRIO-209ENST00000507714 IL2RBP14784 551 aa11.89□□□□□ -0.51
TRIO-209ENST00000507714 USHBP1Q8N6Y0 703 aa11.89□□□□□ -0.51
TRIO-209ENST00000507714 SPG7Q9UQ90 795 aa11.89□□□□□ -0.51
TRIO-209ENST00000507714 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
TRIO-209ENST00000507714 CCDC146Q8IYE0 955 aa11.88□□□□□ -0.51
TRIO-209ENST00000507714 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
TRIO-209ENST00000507714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIO-209ENST00000507714 NCAPD2Q15021 1401 aa11.87□□□□□ -0.51
TRIO-209ENST00000507714 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
TRIO-209ENST00000507714 DDB1Q16531 1140 aa11.87□□□□□ -0.51
TRIO-209ENST00000507714 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
TRIO-209ENST00000507714 EXOC5O00471 708 aa11.86□□□□□ -0.51
TRIO-209ENST00000507714 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
TRIO-209ENST00000507714 CCDC125Q86Z20 511 aa11.86□□□□□ -0.51
TRIO-209ENST00000507714 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
TRIO-209ENST00000507714 APAF1O14727 1248 aa11.85□□□□□ -0.51
TRIO-209ENST00000507714 HNRNPUQ00839 825 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRIO-209ENST00000507714 NFE2L2Q16236 605 aa11.85□□□□□ -0.51
TRIO-209ENST00000507714 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
TRIO-209ENST00000507714 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
TRIO-209ENST00000507714 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
TRIO-209ENST00000507714 TMPOP42166 694 aaKnown RBP11.84□□□□□ -0.51
TRIO-209ENST00000507714 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
TRIO-209ENST00000507714 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
TRIO-209ENST00000507714 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
TRIO-209ENST00000507714 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.51
TRIO-209ENST00000507714 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.51
TRIO-209ENST00000507714 RIPK4P57078 832 aa11.83□□□□□ -0.52
TRIO-209ENST00000507714 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
TRIO-209ENST00000507714 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
TRIO-209ENST00000507714 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
TRIO-209ENST00000507714 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
TRIO-209ENST00000507714 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
TRIO-209ENST00000507714 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
TRIO-209ENST00000507714 WNK3Q9BYP7 1800 aa11.82□□□□□ -0.52
TRIO-209ENST00000507714 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
TRIO-209ENST00000507714 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
TRIO-209ENST00000507714 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
TRIO-209ENST00000507714 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
TRIO-209ENST00000507714 IFNL2Q8IZJ0 200 aa11.82□□□□□ -0.52
TRIO-209ENST00000507714 UPF1Q92900 1129 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRIO-209ENST00000507714 OVOS2A0A0G2JMS6 1433 aa11.82□□□□□ -0.52
TRIO-209ENST00000507714 MEGF6O75095 1541 aa11.81□□□□□ -0.52
TRIO-209ENST00000507714 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
TRIO-209ENST00000507714 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
TRIO-209ENST00000507714 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
TRIO-209ENST00000507714 DISP2A7MBM2 1401 aa11.8□□□□□ -0.52
TRIO-209ENST00000507714 BAG6P46379 1132 aa11.8□□□□□ -0.52
TRIO-209ENST00000507714 CCDC27Q2M243 656 aa11.8□□□□□ -0.52
TRIO-209ENST00000507714 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
TRIO-209ENST00000507714 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
TRIO-209ENST00000507714 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
TRIO-209ENST00000507714 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
TRIO-209ENST00000507714 TNS2Q63HR2 1409 aa11.79□□□□□ -0.52
TRIO-209ENST00000507714 FAM182BQ5T319 152 aa11.79□□□□□ -0.52
TRIO-209ENST00000507714 LRRC37A3O60309 1634 aa11.78□□□□□ -0.52
TRIO-209ENST00000507714 PHKG2P15735 406 aa11.78□□□□□ -0.52
TRIO-209ENST00000507714 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
TRIO-209ENST00000507714 ZBED9Q6R2W3 1325 aa11.78□□□□□ -0.52
TRIO-209ENST00000507714 WDR63Q8IWG1 891 aa11.77□□□□□ -0.53
TRIO-209ENST00000507714 CYP27B1O15528 508 aa11.76□□□□□ -0.53
TRIO-209ENST00000507714 TRIM37O94972 964 aa11.76□□□□□ -0.53
TRIO-209ENST00000507714 TEFQ10587 303 aa11.76□□□□□ -0.53
TRIO-209ENST00000507714 WWC1Q8IX03 1113 aa11.76□□□□□ -0.53
TRIO-209ENST00000507714 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
TRIO-209ENST00000507714 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
TRIO-209ENST00000507714 RNMTO43148 476 aaKnown RBP11.75□□□□□ -0.53
TRIO-209ENST00000507714 APBA3O96018 575 aa11.75□□□□□ -0.53
TRIO-209ENST00000507714 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
TRIO-209ENST00000507714 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
TRIO-209ENST00000507714 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
TRIO-209ENST00000507714 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
TRIO-209ENST00000507714 IL16Q14005 1332 aa11.75□□□□□ -0.53
TRIO-209ENST00000507714 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
TRIO-209ENST00000507714 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
TRIO-209ENST00000507714 CABP4P57796 275 aa11.74□□□□□ -0.53
TRIO-209ENST00000507714 GNAI1P63096 354 aa11.74□□□□□ -0.53
TRIO-209ENST00000507714 MCM10Q7L590 875 aa11.74□□□□□ -0.53
TRIO-209ENST00000507714 MARCH10Q8NA82 808 aaPredicted RBP11.74□□□□□ -0.53
TRIO-209ENST00000507714 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
TRIO-209ENST00000507714 E9PSI1 815 aa11.73□□□□□ -0.53
TRIO-209ENST00000507714 TAF7Q15545 349 aaPredicted RBP11.73□□□□□ -0.53
TRIO-209ENST00000507714 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
TRIO-209ENST00000507714 SHANK3Q9BYB0 1731 aa11.73□□□□□ -0.53
TRIO-209ENST00000507714 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
TRIO-209ENST00000507714 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
TRIO-209ENST00000507714 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
TRIO-209ENST00000507714 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
TRIO-209ENST00000507714 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
TRIO-209ENST00000507714 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms