RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TRPM3Q9HCF6 1732 aaPredicted RBP15.58■□□□□ 0.08
LIN54-206ENST00000506560 ATF3P18847 181 aa15.58■□□□□ 0.08
LIN54-206ENST00000506560 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
LIN54-206ENST00000506560 MSH6P52701 1360 aa15.57■□□□□ 0.08
LIN54-206ENST00000506560 ZC3H6P61129 1189 aaKnown RBP15.57■□□□□ 0.08
LIN54-206ENST00000506560 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
LIN54-206ENST00000506560 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
LIN54-206ENST00000506560 KIF24Q5T7B8 1368 aa15.56■□□□□ 0.08
LIN54-206ENST00000506560 MS4A1P11836 297 aa15.56■□□□□ 0.08
LIN54-206ENST00000506560 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
LIN54-206ENST00000506560 RTF1Q92541 710 aaKnown RBP15.56■□□□□ 0.08
LIN54-206ENST00000506560 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
LIN54-206ENST00000506560 KCNH5Q8NCM2 988 aa15.55■□□□□ 0.08
LIN54-206ENST00000506560 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
LIN54-206ENST00000506560 C1orf115Q9H7X2 142 aa15.55■□□□□ 0.08
LIN54-206ENST00000506560 RTL1A6NKG5 1358 aa15.55■□□□□ 0.08
LIN54-206ENST00000506560 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
LIN54-206ENST00000506560 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
LIN54-206ENST00000506560 BRPF1P55201 1214 aaPredicted RBP15.54■□□□□ 0.08
LIN54-206ENST00000506560 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
LIN54-206ENST00000506560 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
LIN54-206ENST00000506560 STRCQ7RTU9 1775 aa15.54■□□□□ 0.08
LIN54-206ENST00000506560 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
LIN54-206ENST00000506560 USP19O94966 1318 aa15.53■□□□□ 0.08
LIN54-206ENST00000506560 SLIT3O75094 1523 aa15.53■□□□□ 0.08
LIN54-206ENST00000506560 GNAT3A8MTJ3 354 aa15.53■□□□□ 0.08
LIN54-206ENST00000506560 ZNF428Q96B54 188 aa15.53■□□□□ 0.08
LIN54-206ENST00000506560 PDZRN3Q9UPQ7 1066 aa15.53■□□□□ 0.08
LIN54-206ENST00000506560 XIRP1Q702N8 1843 aaKnown RBP15.53■□□□□ 0.08
LIN54-206ENST00000506560 C8orf34Q49A92 452 aa15.53■□□□□ 0.08
LIN54-206ENST00000506560 MED1Q15648 1581 aaPredicted RBP15.52■□□□□ 0.08
LIN54-206ENST00000506560 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
LIN54-206ENST00000506560 LGR6Q9HBX8 967 aa15.52■□□□□ 0.08
LIN54-206ENST00000506560 ANKRD24Q8TF21 1146 aa15.52■□□□□ 0.07
LIN54-206ENST00000506560 NECTIN2Q92692 538 aa15.52■□□□□ 0.07
LIN54-206ENST00000506560 MAP3K5Q99683 1374 aa15.51■□□□□ 0.07
LIN54-206ENST00000506560 G2E3Q7L622 706 aa15.51■□□□□ 0.07
LIN54-206ENST00000506560 ABCC4O15439 1325 aa15.51■□□□□ 0.07
LIN54-206ENST00000506560 KIF1AQ12756 1690 aa15.5■□□□□ 0.07
LIN54-206ENST00000506560 ALS2Q96Q42 1657 aa15.5■□□□□ 0.07
LIN54-206ENST00000506560 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
LIN54-206ENST00000506560 RWDD1Q9H446 243 aaPredicted RBP15.5■□□□□ 0.07
LIN54-206ENST00000506560 CHRNA2Q15822 529 aa15.49■□□□□ 0.07
LIN54-206ENST00000506560 CADPS2Q86UW7 1296 aa15.49■□□□□ 0.07
LIN54-206ENST00000506560 RGS12O14924 1447 aa15.49■□□□□ 0.07
LIN54-206ENST00000506560 ARHGAP45Q92619 1136 aa15.49■□□□□ 0.07
LIN54-206ENST00000506560 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
LIN54-206ENST00000506560 PXDNQ92626 1479 aa15.49■□□□□ 0.07
LIN54-206ENST00000506560 AAMPQ13685 434 aa15.48■□□□□ 0.07
LIN54-206ENST00000506560 LRRC37A3O60309 1634 aa15.48■□□□□ 0.07
LIN54-206ENST00000506560 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
LIN54-206ENST00000506560 PHRF1Q9P1Y6 1649 aaKnown RBP15.48■□□□□ 0.07
LIN54-206ENST00000506560 KCNQ3O43525 872 aa15.47■□□□□ 0.07
LIN54-206ENST00000506560 MPRIPQ6WCQ1 1025 aa15.47■□□□□ 0.07
LIN54-206ENST00000506560 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
LIN54-206ENST00000506560 F6X3S4 739 aa15.47■□□□□ 0.07
LIN54-206ENST00000506560 DCCP43146 1447 aa15.47■□□□□ 0.07
LIN54-206ENST00000506560 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
LIN54-206ENST00000506560 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.07
LIN54-206ENST00000506560 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
LIN54-206ENST00000506560 ERBB3P21860 1342 aa15.45■□□□□ 0.06
LIN54-206ENST00000506560 HDAC1Q13547 482 aaPredicted RBP15.45■□□□□ 0.06
LIN54-206ENST00000506560 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
LIN54-206ENST00000506560 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
LIN54-206ENST00000506560 SEC24BO95487 1268 aa15.45■□□□□ 0.06
LIN54-206ENST00000506560 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
LIN54-206ENST00000506560 API5Q9BZZ5 524 aaKnown RBP15.45■□□□□ 0.06
LIN54-206ENST00000506560 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
LIN54-206ENST00000506560 CEMIPQ8WUJ3 1361 aa15.43■□□□□ 0.06
LIN54-206ENST00000506560 NCOA3Q9Y6Q9 1424 aa15.43■□□□□ 0.06
LIN54-206ENST00000506560 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
LIN54-206ENST00000506560 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
LIN54-206ENST00000506560 SMC5Q8IY18 1101 aa15.42■□□□□ 0.06
LIN54-206ENST00000506560 NLRP2Q9NX02 1062 aa15.42■□□□□ 0.06
LIN54-206ENST00000506560 SLC4A10Q6U841 1118 aa15.41■□□□□ 0.06
LIN54-206ENST00000506560 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
LIN54-206ENST00000506560 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
LIN54-206ENST00000506560 MEIS3Q99687 375 aa15.41■□□□□ 0.06
LIN54-206ENST00000506560 LNPKQ9C0E8 428 aa15.41■□□□□ 0.06
LIN54-206ENST00000506560 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
LIN54-206ENST00000506560 PLEKHO1Q53GL0 409 aaPredicted RBP15.41■□□□□ 0.06
LIN54-206ENST00000506560 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
LIN54-206ENST00000506560 INTS3Q68E01 1043 aaKnown RBP15.4■□□□□ 0.06
LIN54-206ENST00000506560 AKAP4Q5JQC9 854 aa15.4■□□□□ 0.06
LIN54-206ENST00000506560 COL18A1P39060 1754 aa15.4■□□□□ 0.06
LIN54-206ENST00000506560 ANXA1P04083 346 aa15.39■□□□□ 0.05
LIN54-206ENST00000506560 EIF2S2P20042 333 aaKnown RBP15.39■□□□□ 0.05
LIN54-206ENST00000506560 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
LIN54-206ENST00000506560 VIRMAQ69YN4 1812 aaKnown RBP15.39■□□□□ 0.05
LIN54-206ENST00000506560 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
LIN54-206ENST00000506560 CSB-PGBD3P0DP91 1061 aa15.38■□□□□ 0.05
LIN54-206ENST00000506560 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
LIN54-206ENST00000506560 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
LIN54-206ENST00000506560 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
LIN54-206ENST00000506560 FAM208AQ9UK61 1670 aaKnown RBP15.38■□□□□ 0.05
LIN54-206ENST00000506560 CAMTA1Q9Y6Y1 1673 aa15.38■□□□□ 0.05
LIN54-206ENST00000506560 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
LIN54-206ENST00000506560 TEFQ10587 303 aa15.37■□□□□ 0.05
LIN54-206ENST00000506560 FLIIQ13045 1269 aa15.37■□□□□ 0.05
LIN54-206ENST00000506560 MEGF6O75095 1541 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms