RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RGPD4Q7Z3J3 1758 aa19.9■□□□□ 0.78
CDC42SE2-209ENST00000506419 ZBTB7AO95365 584 aa19.9■□□□□ 0.78
CDC42SE2-209ENST00000506419 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
CDC42SE2-209ENST00000506419 KIF24Q5T7B8 1368 aa19.9■□□□□ 0.78
CDC42SE2-209ENST00000506419 FAM208AQ9UK61 1670 aaKnown RBP19.9■□□□□ 0.78
CDC42SE2-209ENST00000506419 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
CDC42SE2-209ENST00000506419 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
CDC42SE2-209ENST00000506419 SYTL4Q96C24 671 aaPredicted RBP19.89■□□□□ 0.77
CDC42SE2-209ENST00000506419 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
CDC42SE2-209ENST00000506419 RGPD2P0DJD1 1756 aa19.88■□□□□ 0.77
CDC42SE2-209ENST00000506419 NHSQ6T4R5 1651 aa19.88■□□□□ 0.77
CDC42SE2-209ENST00000506419 KCNQ4P56696 695 aa19.88■□□□□ 0.77
CDC42SE2-209ENST00000506419 PTGER2P43116 358 aa19.87■□□□□ 0.77
CDC42SE2-209ENST00000506419 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
CDC42SE2-209ENST00000506419 ZNF827Q17R98 1081 aa19.87■□□□□ 0.77
CDC42SE2-209ENST00000506419 EYA1Q99502 592 aa19.87■□□□□ 0.77
CDC42SE2-209ENST00000506419 SMG6Q86US8 1419 aaKnown RBP19.86■□□□□ 0.77
CDC42SE2-209ENST00000506419 NSD2O96028 1365 aa19.86■□□□□ 0.77
CDC42SE2-209ENST00000506419 CYP27B1O15528 508 aa19.86■□□□□ 0.77
CDC42SE2-209ENST00000506419 AKT1S1Q96B36 256 aa19.85■□□□□ 0.77
CDC42SE2-209ENST00000506419 PPP1R1BQ9UD71 204 aaPredicted RBP19.85■□□□□ 0.77
CDC42SE2-209ENST00000506419 KAT6BQ8WYB5 2073 aa19.84■□□□□ 0.77
CDC42SE2-209ENST00000506419 SLC27A3Q5K4L6 730 aa19.84■□□□□ 0.77
CDC42SE2-209ENST00000506419 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.77
CDC42SE2-209ENST00000506419 BTAF1O14981 1849 aa19.82■□□□□ 0.76
CDC42SE2-209ENST00000506419 SGIP1Q9BQI5 828 aa19.82■□□□□ 0.76
CDC42SE2-209ENST00000506419 EIF4A2Q14240 407 aaKnown RBP19.81■□□□□ 0.76
CDC42SE2-209ENST00000506419 CASZ1Q86V15 1759 aa19.8■□□□□ 0.76
CDC42SE2-209ENST00000506419 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
CDC42SE2-209ENST00000506419 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
CDC42SE2-209ENST00000506419 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
CDC42SE2-209ENST00000506419 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
CDC42SE2-209ENST00000506419 NKX1-1Q15270 411 aaPredicted RBP19.79■□□□□ 0.76
CDC42SE2-209ENST00000506419 SHANK3Q9BYB0 1731 aa19.79■□□□□ 0.76
CDC42SE2-209ENST00000506419 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
CDC42SE2-209ENST00000506419 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
CDC42SE2-209ENST00000506419 PAPPAQ13219 1627 aa19.76■□□□□ 0.75
CDC42SE2-209ENST00000506419 MORC1Q86VD1 984 aa19.76■□□□□ 0.75
CDC42SE2-209ENST00000506419 SPG7Q9UQ90 795 aa19.76■□□□□ 0.75
CDC42SE2-209ENST00000506419 KIF7Q2M1P5 1343 aa19.76■□□□□ 0.75
CDC42SE2-209ENST00000506419 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
CDC42SE2-209ENST00000506419 PIGBQ92521 554 aa19.75■□□□□ 0.75
CDC42SE2-209ENST00000506419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.75■□□□□ 0.753e-12■□□□□ 8.9
CDC42SE2-209ENST00000506419 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
CDC42SE2-209ENST00000506419 MAP2P11137 1827 aaKnown RBP19.74■□□□□ 0.75
CDC42SE2-209ENST00000506419 AMER1Q5JTC6 1135 aaPredicted RBP19.74■□□□□ 0.75
CDC42SE2-209ENST00000506419 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
CDC42SE2-209ENST00000506419 SYT17Q9BSW7 474 aa19.73■□□□□ 0.75
CDC42SE2-209ENST00000506419 FHDC1Q9C0D6 1143 aaPredicted RBP19.73■□□□□ 0.75
CDC42SE2-209ENST00000506419 PER1O15534 1290 aaPredicted RBP19.72■□□□□ 0.75
CDC42SE2-209ENST00000506419 PHKG2P15735 406 aa19.72■□□□□ 0.75
CDC42SE2-209ENST00000506419 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
CDC42SE2-209ENST00000506419 ARXQ96QS3 562 aa19.72■□□□□ 0.75
CDC42SE2-209ENST00000506419 IFNL2Q8IZJ0 200 aa19.71■□□□□ 0.75
CDC42SE2-209ENST00000506419 SLC16A10Q8TF71 515 aa19.71■□□□□ 0.75
CDC42SE2-209ENST00000506419 IGSF1Q8N6C5 1336 aa19.71■□□□□ 0.75
CDC42SE2-209ENST00000506419 COL23A1Q86Y22 540 aaPredicted RBP19.7■□□□□ 0.74
CDC42SE2-209ENST00000506419 ANKRD26Q9UPS8 1709 aa19.7■□□□□ 0.74
CDC42SE2-209ENST00000506419 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
CDC42SE2-209ENST00000506419 AEBP1Q8IUX7 1158 aa19.68■□□□□ 0.74
CDC42SE2-209ENST00000506419 SMARCC1Q92922 1105 aaPredicted RBP19.68■□□□□ 0.74
CDC42SE2-209ENST00000506419 ASAP1Q9ULH1 1129 aa19.68■□□□□ 0.74
CDC42SE2-209ENST00000506419 UTRNP46939 3433 aa19.68■□□□□ 0.74
CDC42SE2-209ENST00000506419 IL13P35225 146 aa19.67■□□□□ 0.74
CDC42SE2-209ENST00000506419 LY75O60449 1722 aa19.66■□□□□ 0.74
CDC42SE2-209ENST00000506419 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
CDC42SE2-209ENST00000506419 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
CDC42SE2-209ENST00000506419 AMIGO3Q86WK7 504 aa19.65■□□□□ 0.74
CDC42SE2-209ENST00000506419 ATG3Q9NT62 314 aa19.65■□□□□ 0.74
CDC42SE2-209ENST00000506419 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
CDC42SE2-209ENST00000506419 MSH5O43196 834 aa19.64■□□□□ 0.73
CDC42SE2-209ENST00000506419 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.73
CDC42SE2-209ENST00000506419 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
CDC42SE2-209ENST00000506419 PKD1L3Q7Z443 1732 aa19.64■□□□□ 0.73
CDC42SE2-209ENST00000506419 LOC102724428A0A0B4J2F2 783 aa19.63■□□□□ 0.73
CDC42SE2-209ENST00000506419 MTHFSP49914 203 aa19.63■□□□□ 0.73
CDC42SE2-209ENST00000506419 SIK1P57059 783 aa19.63■□□□□ 0.73
CDC42SE2-209ENST00000506419 TOGARAM1Q9Y4F4 1720 aa19.62■□□□□ 0.73
CDC42SE2-209ENST00000506419 YY1P25490 414 aa19.62■□□□□ 0.73
CDC42SE2-209ENST00000506419 POLD1P28340 1107 aa19.62■□□□□ 0.73
CDC42SE2-209ENST00000506419 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
CDC42SE2-209ENST00000506419 ERVV-2B6SEH9 535 aa19.61■□□□□ 0.73
CDC42SE2-209ENST00000506419 ITPK1Q13572 414 aa19.61■□□□□ 0.73
CDC42SE2-209ENST00000506419 AMOTQ4VCS5 1084 aa19.61■□□□□ 0.73
CDC42SE2-209ENST00000506419 ZNF530Q6P9A1 599 aaPredicted RBP19.61■□□□□ 0.73
CDC42SE2-209ENST00000506419 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
CDC42SE2-209ENST00000506419 MSL1Q68DK7 614 aa19.6■□□□□ 0.73
CDC42SE2-209ENST00000506419 DCAF5Q96JK2 942 aa19.6■□□□□ 0.73
CDC42SE2-209ENST00000506419 SLC4A9Q96Q91 983 aa19.6■□□□□ 0.73
CDC42SE2-209ENST00000506419 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
CDC42SE2-209ENST00000506419 PLEKHG2Q9H7P9 1386 aa19.59■□□□□ 0.73
CDC42SE2-209ENST00000506419 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
CDC42SE2-209ENST00000506419 HMGB2P26583 209 aaKnown RBP19.58■□□□□ 0.72
CDC42SE2-209ENST00000506419 ATP6V1AP38606 617 aa19.58■□□□□ 0.72
CDC42SE2-209ENST00000506419 FLAD1Q8NFF5 587 aa19.58■□□□□ 0.72
CDC42SE2-209ENST00000506419 AK7Q96M32 723 aa19.58■□□□□ 0.72
CDC42SE2-209ENST00000506419 ITGB4P16144 1822 aa19.58■□□□□ 0.72
CDC42SE2-209ENST00000506419 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
CDC42SE2-209ENST00000506419 KLHL34Q8N239 644 aa19.57■□□□□ 0.72
CDC42SE2-209ENST00000506419 KDRP35968 1356 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms