RNA–Protein interactions for RNA: ENST00000506167.5

BRD8-222, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 1,363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-222	ENST00000506167	BCAR3	O75815	825 aa		13.55	□□□□□ -0.24
BRD8-222	ENST00000506167	EXOSC9	Q06265	439 aa	Known RBP	13.55	□□□□□ -0.24
BRD8-222	ENST00000506167	ZKSCAN2	Q63HK3	967 aa		13.55	□□□□□ -0.24
BRD8-222	ENST00000506167	DDX17	Q92841	729 aa	Known RBP	13.55	□□□□□ -0.24
BRD8-222	ENST00000506167	COL16A1	Q07092	1604 aa	Predicted RBP	13.55	□□□□□ -0.24
BRD8-222	ENST00000506167	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.55	□□□□□ -0.24
BRD8-222	ENST00000506167	NHSL1	Q5SYE7	1610 aa		13.54	□□□□□ -0.24
BRD8-222	ENST00000506167	TSR2	Q969E8	191 aa	Known RBP	13.54	□□□□□ -0.24
BRD8-222	ENST00000506167	CHMP4A	Q9BY43	222 aa		13.54	□□□□□ -0.24
BRD8-222	ENST00000506167	SMC4	Q9NTJ3	1288 aa		13.54	□□□□□ -0.24
BRD8-222	ENST00000506167	KIAA0232	Q92628	1395 aa		13.53	□□□□□ -0.24
BRD8-222	ENST00000506167	MARF1	Q9Y4F3	1742 aa	Known RBP	13.53	□□□□□ -0.24
BRD8-222	ENST00000506167	CAPN15	O75808	1086 aa		13.53	□□□□□ -0.24
BRD8-222	ENST00000506167	AMOT	Q4VCS5	1084 aa		13.53	□□□□□ -0.24
BRD8-222	ENST00000506167	TSHZ2	Q9NRE2	1034 aa		13.53	□□□□□ -0.24
BRD8-222	ENST00000506167	SPATA31A3	Q5VYP0	1347 aa		13.53	□□□□□ -0.24
BRD8-222	ENST00000506167	NCAPD2	Q15021	1401 aa		13.52	□□□□□ -0.24
BRD8-222	ENST00000506167	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.52	□□□□□ -0.24
BRD8-222	ENST00000506167	CHL1	O00533	1208 aa		13.52	□□□□□ -0.25
BRD8-222	ENST00000506167	CACNB1	Q02641	598 aa	Predicted RBP	13.52	□□□□□ -0.25
BRD8-222	ENST00000506167	LMOD2	Q6P5Q4	547 aa		13.52	□□□□□ -0.25
BRD8-222	ENST00000506167	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.52	□□□□□ -0.25
BRD8-222	ENST00000506167	ARHGAP45	Q92619	1136 aa		13.52	□□□□□ -0.25
BRD8-222	ENST00000506167	CPD	O75976	1380 aa		13.52	□□□□□ -0.25
BRD8-222	ENST00000506167	PXDN	Q92626	1479 aa		13.51	□□□□□ -0.25
BRD8-222	ENST00000506167	GNAT3	A8MTJ3	354 aa		13.51	□□□□□ -0.25
BRD8-222	ENST00000506167	FTSJ3	Q8IY81	847 aa	Known RBP	13.51	□□□□□ -0.25
BRD8-222	ENST00000506167	MBIP	Q9NS73	344 aa		13.51	□□□□□ -0.25
BRD8-222	ENST00000506167	MED1	Q15648	1581 aa	Predicted RBP	13.5	□□□□□ -0.25
BRD8-222	ENST00000506167	MTHFSD	Q2M296	383 aa	Known RBP	13.5	□□□□□ -0.25
BRD8-222	ENST00000506167	FRAT1	Q92837	279 aa	Predicted RBP	13.5	□□□□□ -0.25
BRD8-222	ENST00000506167	LAS1L	Q9Y4W2	734 aa	Known RBP	13.5	□□□□□ -0.25
BRD8-222	ENST00000506167	SOS2	Q07890	1332 aa	Predicted RBP	13.5	□□□□□ -0.25
BRD8-222	ENST00000506167	MAP3K5	Q99683	1374 aa		13.5	□□□□□ -0.25
BRD8-222	ENST00000506167	XPC	Q01831	940 aa	Predicted RBP	13.49	□□□□□ -0.25
BRD8-222	ENST00000506167	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.49	□□□□□ -0.25
BRD8-222	ENST00000506167	C20orf194	Q5TEA3	1177 aa		13.49	□□□□□ -0.25
BRD8-222	ENST00000506167	ATF7IP	Q6VMQ6	1270 aa		13.49	□□□□□ -0.25
BRD8-222	ENST00000506167	DZIP1L	Q8IYY4	767 aa	Known RBP	13.49	□□□□□ -0.25
BRD8-222	ENST00000506167	SSH1	Q8WYL5	1049 aa		13.49	□□□□□ -0.25
BRD8-222	ENST00000506167	VAMP4	O75379	141 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	TWISTNB	Q3B726	338 aa	Predicted RBP	13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	ANKRD24	Q8TF21	1146 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	CLUAP1	Q96AJ1	413 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	DDX19B	Q9UMR2	479 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	OVOS2	A0A0G2JMS6	1433 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	CRB1	P82279	1406 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	ALS2	Q96Q42	1657 aa		13.48	□□□□□ -0.25
BRD8-222	ENST00000506167	LTV1	Q96GA3	475 aa	Predicted RBP	13.47	□□□□□ -0.25
BRD8-222	ENST00000506167	ERBB3	P21860	1342 aa		13.46	□□□□□ -0.25
BRD8-222	ENST00000506167	MVP	Q14764	893 aa	Known RBP	13.46	□□□□□ -0.25
BRD8-222	ENST00000506167	THUMPD2	Q9BTF0	503 aa	Known RBP	13.46	□□□□□ -0.25
BRD8-222	ENST00000506167	API5	Q9BZZ5	524 aa	Known RBP	13.46	□□□□□ -0.25
BRD8-222	ENST00000506167	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.46	□□□□□ -0.25	4e-7	■■■□□ 18.8
BRD8-222	ENST00000506167	JCAD	Q9P266	1359 aa		13.46	□□□□□ -0.26
BRD8-222	ENST00000506167	TCERG1	O14776	1098 aa	Known RBP	13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	AKAP4	Q5JQC9	854 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	NBPF6	Q5VWK0	638 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	NBPF4	Q96M43	638 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	FAM83G	A6ND36	823 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	C1orf141	Q5JVX7	400 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	MCM10	Q7L590	875 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	TSPYL4	Q9UJ04	414 aa		13.45	□□□□□ -0.26
BRD8-222	ENST00000506167	KDM2B	Q8NHM5	1336 aa		13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	TRIM27	P14373	513 aa		13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	DCTN1	Q14203	1278 aa		13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	TAF7	Q15545	349 aa	Predicted RBP	13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	PANK1	Q8TE04	598 aa		13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	BCL2L13	Q9BXK5	485 aa		13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	NOB1	Q9ULX3	412 aa	Known RBP	13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	COG6	Q9Y2V7	657 aa		13.44	□□□□□ -0.26
BRD8-222	ENST00000506167	LRP6	O75581	1613 aa		13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	CEMIP	Q8WUJ3	1361 aa		13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	PTPRC	P08575	1304 aa		13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	ZBTB7C	A1YPR0	619 aa		13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	HOXB7	P09629	217 aa		13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	MRPL50	Q8N5N7	158 aa	Known RBP	13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	RAPGEF4	Q8WZA2	1011 aa		13.43	□□□□□ -0.26
BRD8-222	ENST00000506167	CAMTA1	Q9Y6Y1	1673 aa		13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	LRRC37A3	O60309	1634 aa		13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	ZC3H6	P61129	1189 aa	Known RBP	13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	C8orf58	Q8NAV2	365 aa		13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	LRRC59	Q96AG4	307 aa	Known RBP	13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	RWDD1	Q9H446	243 aa	Predicted RBP	13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	SPG7	Q9UQ90	795 aa		13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	LTN1	O94822	1766 aa		13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	DLG5	Q8TDM6	1919 aa		13.41	□□□□□ -0.26
BRD8-222	ENST00000506167	TAT	P17735	454 aa	Predicted RBP	13.4	□□□□□ -0.26
BRD8-222	ENST00000506167	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.4	□□□□□ -0.26
BRD8-222	ENST00000506167	TSPYL6	Q8N831	410 aa		13.4	□□□□□ -0.26
BRD8-222	ENST00000506167	HSP90AB1	P08238	724 aa	Known RBP	13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	CSB-PGBD3	P0DP91	1061 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	RLBP1	P12271	317 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	TEF	Q10587	303 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	CCDC30	Q5VVM6	783 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	ITPRIP	Q8IWB1	547 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	IL17RE	Q8NFR9	667 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	STK31	Q9BXU1	1019 aa		13.39	□□□□□ -0.27
BRD8-222	ENST00000506167	PRDM11	Q9NQV5	511 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms