RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 RAPGEF4Q8WZA2 1011 aa24.25■■□□□ 1.47
SMN1-204ENST00000506163 SHANK3Q9BYB0 1731 aa24.24■■□□□ 1.47
SMN1-204ENST00000506163 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
SMN1-204ENST00000506163 CAMKK2Q96RR4 588 aa24.24■■□□□ 1.47
SMN1-204ENST00000506163 IL13P35225 146 aa24.23■■□□□ 1.47
SMN1-204ENST00000506163 EZH2Q15910 746 aaKnown RBP24.23■■□□□ 1.47
SMN1-204ENST00000506163 BCL11BQ9C0K0 894 aaPredicted RBP24.23■■□□□ 1.47
SMN1-204ENST00000506163 IGSF1Q8N6C5 1336 aa24.23■■□□□ 1.47
SMN1-204ENST00000506163 ACSBG1Q96GR2 724 aa24.22■■□□□ 1.47
SMN1-204ENST00000506163 DDX10Q13206 875 aaKnown RBP24.19■■□□□ 1.46
SMN1-204ENST00000506163 AEBP1Q8IUX7 1158 aa24.19■■□□□ 1.46
SMN1-204ENST00000506163 CYP27B1O15528 508 aa24.18■■□□□ 1.46
SMN1-204ENST00000506163 KAT6BQ8WYB5 2073 aa24.18■■□□□ 1.46
SMN1-204ENST00000506163 PPP2R1AP30153 589 aa24.15■■□□□ 1.46
SMN1-204ENST00000506163 PLSCR1O15162 318 aa24.14■■□□□ 1.45
SMN1-204ENST00000506163 PROM2Q8N271 834 aa24.14■■□□□ 1.45
SMN1-204ENST00000506163 PKD1L3Q7Z443 1732 aa24.14■■□□□ 1.45
SMN1-204ENST00000506163 COL3A1P02461 1466 aaPredicted RBP24.14■■□□□ 1.45
SMN1-204ENST00000506163 SULT6B1Q6IMI4 303 aa24.13■■□□□ 1.45
SMN1-204ENST00000506163 NHSQ6T4R5 1651 aa24.13■■□□□ 1.45
SMN1-204ENST00000506163 PCDH11XQ9BZA7 1347 aa24.12■■□□□ 1.45
SMN1-204ENST00000506163 PCDH11YQ9BZA8 1340 aa24.12■■□□□ 1.45
SMN1-204ENST00000506163 PRIM1P49642 420 aaKnown RBP24.12■■□□□ 1.45
SMN1-204ENST00000506163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMN1-204ENST00000506163 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
SMN1-204ENST00000506163 KDRP35968 1356 aa24.11■■□□□ 1.45
SMN1-204ENST00000506163 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
SMN1-204ENST00000506163 PARD3Q8TEW0 1356 aa24.1■■□□□ 1.45
SMN1-204ENST00000506163 BTAF1O14981 1849 aa24.08■■□□□ 1.45
SMN1-204ENST00000506163 HMOX1P09601 288 aa24.08■■□□□ 1.44
SMN1-204ENST00000506163 NKX1-1Q15270 411 aaPredicted RBP24.08■■□□□ 1.44
SMN1-204ENST00000506163 RREB1Q92766 1687 aa24.08■■□□□ 1.44
SMN1-204ENST00000506163 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
SMN1-204ENST00000506163 PHKG2P15735 406 aa24.07■■□□□ 1.44
SMN1-204ENST00000506163 SYTL4Q96C24 671 aaPredicted RBP24.07■■□□□ 1.44
SMN1-204ENST00000506163 NUP188Q5SRE5 1749 aa24.05■■□□□ 1.44
SMN1-204ENST00000506163 TXNRD1Q16881 649 aa24.04■■□□□ 1.44
SMN1-204ENST00000506163 PLEKHO1Q53GL0 409 aaPredicted RBP24.04■■□□□ 1.44
SMN1-204ENST00000506163 RGPD3A6NKT7 1758 aaPredicted RBP24.04■■□□□ 1.44
SMN1-204ENST00000506163 RGPD4Q7Z3J3 1758 aa24.04■■□□□ 1.44
SMN1-204ENST00000506163 PLEKHG2Q9H7P9 1386 aa24.04■■□□□ 1.44
SMN1-204ENST00000506163 PSDA5PKW4 1024 aaPredicted RBP24.03■■□□□ 1.44
SMN1-204ENST00000506163 IFNL2Q8IZJ0 200 aa24.03■■□□□ 1.44
SMN1-204ENST00000506163 TOGARAM1Q9Y4F4 1720 aa24.03■■□□□ 1.44
SMN1-204ENST00000506163 U2SURPO15042 1029 aaKnown RBP24.01■■□□□ 1.43
SMN1-204ENST00000506163 R3HDM1Q15032 1099 aaKnown RBP24.01■■□□□ 1.43
SMN1-204ENST00000506163 AMOTQ4VCS5 1084 aa24.01■■□□□ 1.43
SMN1-204ENST00000506163 ZNF530Q6P9A1 599 aaPredicted RBP24.01■■□□□ 1.43
SMN1-204ENST00000506163 MPRIPQ6WCQ1 1025 aa24■■□□□ 1.43
SMN1-204ENST00000506163 CFAP53Q96M91 514 aa24■■□□□ 1.43
SMN1-204ENST00000506163 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
SMN1-204ENST00000506163 LRRC4BQ9NT99 713 aa24■■□□□ 1.43
SMN1-204ENST00000506163 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
SMN1-204ENST00000506163 PIGBQ92521 554 aa23.99■■□□□ 1.43
SMN1-204ENST00000506163 ITGB4P16144 1822 aa23.98■■□□□ 1.43
SMN1-204ENST00000506163 KCNQ4P56696 695 aa23.98■■□□□ 1.43
SMN1-204ENST00000506163 SRCAPQ6ZRS2 3230 aa23.97■■□□□ 1.43
SMN1-204ENST00000506163 RALBP1Q15311 655 aa23.97■■□□□ 1.43
SMN1-204ENST00000506163 KDM6AO15550 1401 aaPredicted RBP23.96■■□□□ 1.43
SMN1-204ENST00000506163 MTHFSDQ2M296 383 aaKnown RBP23.95■■□□□ 1.42
SMN1-204ENST00000506163 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
SMN1-204ENST00000506163 RSPH6AQ9H0K4 717 aa23.94■■□□□ 1.42
SMN1-204ENST00000506163 NBPF14Q5TI25 921 aa23.93■■□□□ 1.42
SMN1-204ENST00000506163 PHACTR3Q96KR7 559 aa23.93■■□□□ 1.42
SMN1-204ENST00000506163 U2AF1L5P0DN76 240 aaPredicted RBP23.92■■□□□ 1.42
SMN1-204ENST00000506163 U2AF1Q01081 240 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMN1-204ENST00000506163 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
SMN1-204ENST00000506163 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
SMN1-204ENST00000506163 LY75O60449 1722 aa23.91■■□□□ 1.42
SMN1-204ENST00000506163 ERVV-2B6SEH9 535 aa23.91■■□□□ 1.42
SMN1-204ENST00000506163 HSP90AB1P08238 724 aaKnown RBP23.91■■□□□ 1.42
SMN1-204ENST00000506163 LGR6Q9HBX8 967 aa23.91■■□□□ 1.42
SMN1-204ENST00000506163 TMOD3Q9NYL9 352 aa23.91■■□□□ 1.42
SMN1-204ENST00000506163 ASAP1Q9ULH1 1129 aa23.91■■□□□ 1.42
SMN1-204ENST00000506163 PRKAR2BP31323 418 aa23.9■■□□□ 1.42
SMN1-204ENST00000506163 AKAP4Q5JQC9 854 aa23.9■■□□□ 1.42
SMN1-204ENST00000506163 PAPPAQ13219 1627 aa23.89■■□□□ 1.41
SMN1-204ENST00000506163 SLC27A3Q5K4L6 730 aa23.89■■□□□ 1.41
SMN1-204ENST00000506163 PDGFDQ9GZP0 370 aaPredicted RBP23.89■■□□□ 1.41
SMN1-204ENST00000506163 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.41
SMN1-204ENST00000506163 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
SMN1-204ENST00000506163 SLC15A2Q16348 729 aa23.88■■□□□ 1.41
SMN1-204ENST00000506163 ZNF827Q17R98 1081 aa23.88■■□□□ 1.41
SMN1-204ENST00000506163 MYBBP1AQ9BQG0 1328 aaKnown RBP23.87■■□□□ 1.41
SMN1-204ENST00000506163 ATG3Q9NT62 314 aa23.87■■□□□ 1.41
SMN1-204ENST00000506163 CCNL1Q9UK58 526 aaPredicted RBP23.87■■□□□ 1.41
SMN1-204ENST00000506163 FCHSD2O94868 740 aa23.86■■□□□ 1.41
SMN1-204ENST00000506163 NFATC2IPQ8NCF5 419 aa23.85■■□□□ 1.41
SMN1-204ENST00000506163 AKT1S1Q96B36 256 aa23.85■■□□□ 1.41
SMN1-204ENST00000506163 RNMTO43148 476 aaKnown RBP23.84■■□□□ 1.41
SMN1-204ENST00000506163 CABP4P57796 275 aa23.84■■□□□ 1.41
SMN1-204ENST00000506163 SMARCC1Q92922 1105 aaPredicted RBP23.84■■□□□ 1.41
SMN1-204ENST00000506163 STK32BQ9NY57 414 aa23.84■■□□□ 1.41
SMN1-204ENST00000506163 SCN11AQ9UI33 1791 aa23.84■■□□□ 1.41
SMN1-204ENST00000506163 IL17REQ8NFR9 667 aa23.82■■□□□ 1.4
SMN1-204ENST00000506163 GAS2L2Q8NHY3 880 aa23.82■■□□□ 1.4
SMN1-204ENST00000506163 SLC4A9Q96Q91 983 aa23.82■■□□□ 1.4
SMN1-204ENST00000506163 LOC102724428A0A0B4J2F2 783 aa23.81■■□□□ 1.4
SMN1-204ENST00000506163 SIK1P57059 783 aa23.81■■□□□ 1.4
SMN1-204ENST00000506163 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms