RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 AXIN2Q9Y2T1 843 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 SPATA31E1Q6ZUB1 1445 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 POLR3AO14802 1390 aaPredicted RBP5.29□□□□□ -1.56
TCOF1-208ENST00000506063 LTBP1Q14766 1721 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 ERBB3P21860 1342 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 ADAMTS7Q9UKP4 1686 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 GCP02774 474 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 SAFB2Q14151 953 aaKnown RBP eCLIP5.28□□□□□ -1.56
TCOF1-208ENST00000506063 PRPF38BQ5VTL8 546 aaKnown RBP5.28□□□□□ -1.56
TCOF1-208ENST00000506063 C9orf131Q5VYM1 1079 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 CREBZFQ9NS37 354 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 PPIP5K1Q6PFW1 1433 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 ADGRB1O14514 1584 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 TIAM2Q8IVF5 1701 aa5.28□□□□□ -1.56
TCOF1-208ENST00000506063 POTECB2RU33 542 aa5.27□□□□□ -1.57
TCOF1-208ENST00000506063 TOM1L2Q6ZVM7 507 aa5.27□□□□□ -1.57
TCOF1-208ENST00000506063 NGDNQ8NEJ9 315 aaKnown RBP5.27□□□□□ -1.57
TCOF1-208ENST00000506063 CARD10Q9BWT7 1032 aa5.27□□□□□ -1.57
TCOF1-208ENST00000506063 KDM2BQ8NHM5 1336 aa5.26□□□□□ -1.57
TCOF1-208ENST00000506063 C4BP0C0L5 1744 aa5.26□□□□□ -1.57
TCOF1-208ENST00000506063 KDM6AO15550 1401 aaPredicted RBP5.26□□□□□ -1.57
TCOF1-208ENST00000506063 EXOC5O00471 708 aa5.26□□□□□ -1.57
TCOF1-208ENST00000506063 VEGFBP49765 207 aa5.26□□□□□ -1.57
TCOF1-208ENST00000506063 SMIM5Q71RC9 77 aa5.26□□□□□ -1.57
TCOF1-208ENST00000506063 C14orf93Q9H972 538 aaKnown RBP5.26□□□□□ -1.57
TCOF1-208ENST00000506063 DICER1Q9UPY3 1922 aaKnown RBP5.25□□□□□ -1.57
TCOF1-208ENST00000506063 CPSF1Q10570 1443 aaKnown RBP5.25□□□□□ -1.57
TCOF1-208ENST00000506063 WASLO00401 505 aaPredicted RBP5.25□□□□□ -1.57
TCOF1-208ENST00000506063 EIF3AQ14152 1382 aaKnown RBP5.25□□□□□ -1.57
TCOF1-208ENST00000506063 MAP2P11137 1827 aaKnown RBP5.25□□□□□ -1.57
TCOF1-208ENST00000506063 KCNA3P22001 575 aa5.24□□□□□ -1.57
TCOF1-208ENST00000506063 ARHGAP27Q6ZUM4 889 aa5.24□□□□□ -1.57
TCOF1-208ENST00000506063 ABTB2Q8N961 1025 aa5.24□□□□□ -1.57
TCOF1-208ENST00000506063 AIDAQ96BJ3 306 aa5.24□□□□□ -1.57
TCOF1-208ENST00000506063 BCS1LQ9Y276 419 aa5.24□□□□□ -1.57
TCOF1-208ENST00000506063 CCDC7Q96M83 1385 aa5.24□□□□□ -1.57
TCOF1-208ENST00000506063 ACEP12821 1306 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 PASKQ96RG2 1323 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 NFAT5O94916 1531 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 DLL1O00548 723 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 MSH5O43196 834 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 VEGFAP15692 232 aaPredicted RBP5.23□□□□□ -1.57
TCOF1-208ENST00000506063 DCAF5Q96JK2 942 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 MCOLN1Q9GZU1 580 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 RNF181Q9P0P0 153 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 ADAMTSL1Q8N6G6 1762 aa5.23□□□□□ -1.57
TCOF1-208ENST00000506063 MINK1Q8N4C8 1332 aaPredicted RBP5.23□□□□□ -1.57
TCOF1-208ENST00000506063 ANKRD36BQ8N2N9 1353 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 A0A0G2JLW4 131 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 POTEIP0CG38 1075 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 POTEJP0CG39 1038 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 FXR1P51114 621 aaKnown RBP eCLIP5.22□□□□□ -1.57
TCOF1-208ENST00000506063 HABP4Q5JVS0 413 aaKnown RBP5.22□□□□□ -1.57
TCOF1-208ENST00000506063 CFAP70Q5T0N1 1121 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 ARHGEF25Q86VW2 580 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 NUDT16Q96DE0 195 aaKnown RBP5.22□□□□□ -1.57
TCOF1-208ENST00000506063 CCNL1Q9UK58 526 aaPredicted RBP5.22□□□□□ -1.57
TCOF1-208ENST00000506063 C4AP0C0L4 1744 aa5.22□□□□□ -1.57
TCOF1-208ENST00000506063 ZC3H4Q9UPT8 1303 aaKnown RBP5.22□□□□□ -1.57
TCOF1-208ENST00000506063 PLEKHG3A1L390 1219 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 GLTPD2A6NH11 291 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 DPEP1P16444 411 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 TGFB2P61812 414 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 FAM50AQ14320 339 aaKnown RBP5.21□□□□□ -1.58
TCOF1-208ENST00000506063 NLRP13Q86W25 1043 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 MEGF6O75095 1541 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 LTN1O94822 1766 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 NSD3Q9BZ95 1437 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 PITPNM2Q9BZ72 1349 aa5.21□□□□□ -1.58
TCOF1-208ENST00000506063 ITGB4P16144 1822 aa5.2□□□□□ -1.58
TCOF1-208ENST00000506063 BRCA2P51587 3418 aa5.2□□□□□ -1.58
TCOF1-208ENST00000506063 TRIOBPQ9H2D6 2365 aa5.2□□□□□ -1.58
TCOF1-208ENST00000506063 DLEC1Q9Y238 1755 aa5.2□□□□□ -1.58
TCOF1-208ENST00000506063 RASSF10A6NK89 507 aa5.2□□□□□ -1.58
TCOF1-208ENST00000506063 FCHSD2O94868 740 aa5.2□□□□□ -1.58
TCOF1-208ENST00000506063 PRIM1P49642 420 aaKnown RBP5.2□□□□□ -1.58
TCOF1-208ENST00000506063 FAM208AQ9UK61 1670 aaKnown RBP5.2□□□□□ -1.58
TCOF1-208ENST00000506063 UNC80Q8N2C7 3258 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 RGPD2P0DJD1 1756 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 SCN4AP35499 1836 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 ZBTB7CA1YPR0 619 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 ITGBL1O95965 494 aaPredicted RBP5.19□□□□□ -1.58
TCOF1-208ENST00000506063 SOX10P56693 466 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 RGL3Q3MIN7 710 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 CHADLQ6NUI6 762 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 FLAD1Q8NFF5 587 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 CFAP44Q96MT7 982 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 POGKQ9P215 609 aa5.19□□□□□ -1.58
TCOF1-208ENST00000506063 RANBP2P49792 3224 aaKnown RBP5.18□□□□□ -1.58
TCOF1-208ENST00000506063 FER1L6Q2WGJ9 1857 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 TRPM7Q96QT4 1865 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.18□□□□□ -1.58
TCOF1-208ENST00000506063 MMP10P09238 476 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 IL2RBP14784 551 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 MAP2K1Q02750 393 aaPredicted RBP5.18□□□□□ -1.58
TCOF1-208ENST00000506063 RASSF7Q02833 373 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 TSKSQ9UJT2 592 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 VCANP13611 3396 aa5.18□□□□□ -1.58
TCOF1-208ENST00000506063 WDR33Q9C0J8 1336 aaKnown RBP5.18□□□□□ -1.58
TCOF1-208ENST00000506063 CENPFP49454 3210 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms