RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
NR1I3-222ENST00000506018 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
NR1I3-222ENST00000506018 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
NR1I3-222ENST00000506018 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
NR1I3-222ENST00000506018 PTF1AQ7RTS3 328 aa14.35□□□□□ -0.11
NR1I3-222ENST00000506018 ZCRB1Q8TBF4 217 aaKnown RBP14.35□□□□□ -0.11
NR1I3-222ENST00000506018 CARD14Q9BXL6 1004 aa14.35□□□□□ -0.11
NR1I3-222ENST00000506018 STK32BQ9NY57 414 aa14.35□□□□□ -0.11
NR1I3-222ENST00000506018 KCNQ2O43526 872 aa14.34□□□□□ -0.11
NR1I3-222ENST00000506018 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
NR1I3-222ENST00000506018 SPON1Q9HCB6 807 aa14.34□□□□□ -0.11
NR1I3-222ENST00000506018 PPM1GO15355 546 aaPredicted RBP14.34□□□□□ -0.11
NR1I3-222ENST00000506018 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
NR1I3-222ENST00000506018 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
NR1I3-222ENST00000506018 DOT1LQ8TEK3 1739 aa14.33□□□□□ -0.12
NR1I3-222ENST00000506018 HSP90AB2PQ58FF8 381 aa14.33□□□□□ -0.12
NR1I3-222ENST00000506018 NBPF6Q5VWK0 638 aa14.33□□□□□ -0.12
NR1I3-222ENST00000506018 SYTL4Q96C24 671 aaPredicted RBP14.33□□□□□ -0.12
NR1I3-222ENST00000506018 NBPF4Q96M43 638 aa14.33□□□□□ -0.12
NR1I3-222ENST00000506018 SHANK3Q9BYB0 1731 aa14.32□□□□□ -0.12
NR1I3-222ENST00000506018 MEGF6O75095 1541 aa14.32□□□□□ -0.12
NR1I3-222ENST00000506018 PROM2Q8N271 834 aa14.32□□□□□ -0.12
NR1I3-222ENST00000506018 SLC15A2Q16348 729 aa14.31□□□□□ -0.12
NR1I3-222ENST00000506018 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
NR1I3-222ENST00000506018 ANO8Q9HCE9 1232 aaPredicted RBP14.31□□□□□ -0.12
NR1I3-222ENST00000506018 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
NR1I3-222ENST00000506018 CASZ1Q86V15 1759 aa14.31□□□□□ -0.12
NR1I3-222ENST00000506018 PCDH11XQ9BZA7 1347 aa14.3□□□□□ -0.12
NR1I3-222ENST00000506018 PCDH11YQ9BZA8 1340 aa14.3□□□□□ -0.12
NR1I3-222ENST00000506018 NSD2O96028 1365 aa14.3□□□□□ -0.12
NR1I3-222ENST00000506018 HMGB2P26583 209 aaKnown RBP14.3□□□□□ -0.12
NR1I3-222ENST00000506018 SLC27A3Q5K4L6 730 aa14.3□□□□□ -0.12
NR1I3-222ENST00000506018 PANK3Q9H999 370 aa14.29□□□□□ -0.12
NR1I3-222ENST00000506018 WASHC2AQ641Q2 1341 aa14.29□□□□□ -0.12
NR1I3-222ENST00000506018 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
NR1I3-222ENST00000506018 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.12
NR1I3-222ENST00000506018 LY75O60449 1722 aa14.27□□□□□ -0.13
NR1I3-222ENST00000506018 PKD1L3Q7Z443 1732 aa14.27□□□□□ -0.13
NR1I3-222ENST00000506018 TNNT2P45379 298 aaPredicted RBP14.26□□□□□ -0.13
NR1I3-222ENST00000506018 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
NR1I3-222ENST00000506018 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
NR1I3-222ENST00000506018 SPG7Q9UQ90 795 aa14.26□□□□□ -0.13
NR1I3-222ENST00000506018 KNSTRNQ9Y448 316 aa14.26□□□□□ -0.13
NR1I3-222ENST00000506018 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
NR1I3-222ENST00000506018 QSER1Q2KHR3 1735 aa14.26□□□□□ -0.13
NR1I3-222ENST00000506018 ZBTB7AO95365 584 aa14.24□□□□□ -0.13
NR1I3-222ENST00000506018 MORC1Q86VD1 984 aa14.24□□□□□ -0.13
NR1I3-222ENST00000506018 MTFR1LQ9H019 292 aa14.24□□□□□ -0.13
NR1I3-222ENST00000506018 ITGB4P16144 1822 aa14.24□□□□□ -0.13
NR1I3-222ENST00000506018 ZBTB22O15209 634 aa14.23□□□□□ -0.13
NR1I3-222ENST00000506018 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
NR1I3-222ENST00000506018 EYA1Q99502 592 aa14.22□□□□□ -0.13
NR1I3-222ENST00000506018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
NR1I3-222ENST00000506018 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
NR1I3-222ENST00000506018 LRRC4BQ9NT99 713 aa14.22□□□□□ -0.13
NR1I3-222ENST00000506018 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
NR1I3-222ENST00000506018 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
NR1I3-222ENST00000506018 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.14
NR1I3-222ENST00000506018 MPRIPQ6WCQ1 1025 aa14.21□□□□□ -0.14
NR1I3-222ENST00000506018 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.14
NR1I3-222ENST00000506018 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.14
NR1I3-222ENST00000506018 PDGFDQ9GZP0 370 aaPredicted RBP14.21□□□□□ -0.14
NR1I3-222ENST00000506018 TFCP2L1Q9NZI6 479 aa14.21□□□□□ -0.14
NR1I3-222ENST00000506018 CYP27B1O15528 508 aa14.2□□□□□ -0.14
NR1I3-222ENST00000506018 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
NR1I3-222ENST00000506018 C5P01031 1676 aa14.19□□□□□ -0.14
NR1I3-222ENST00000506018 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
NR1I3-222ENST00000506018 IFNL2Q8IZJ0 200 aa14.19□□□□□ -0.14
NR1I3-222ENST00000506018 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
NR1I3-222ENST00000506018 TUBGCP6Q96RT7 1819 aa14.19□□□□□ -0.14
NR1I3-222ENST00000506018 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
NR1I3-222ENST00000506018 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
NR1I3-222ENST00000506018 PALLDQ8WX93 1383 aa14.18□□□□□ -0.14
NR1I3-222ENST00000506018 POLD1P28340 1107 aa14.18□□□□□ -0.14
NR1I3-222ENST00000506018 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-222ENST00000506018 IGSF1Q8N6C5 1336 aa14.17□□□□□ -0.14
NR1I3-222ENST00000506018 HSP90AB1P08238 724 aaKnown RBP14.17□□□□□ -0.14
NR1I3-222ENST00000506018 PTGER2P43116 358 aa14.17□□□□□ -0.14
NR1I3-222ENST00000506018 TMOD3Q9NYL9 352 aa14.17□□□□□ -0.14
NR1I3-222ENST00000506018 PLEKHO1Q53GL0 409 aaPredicted RBP14.16□□□□□ -0.14
NR1I3-222ENST00000506018 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.14
NR1I3-222ENST00000506018 PHKG2P15735 406 aa14.15□□□□□ -0.14
NR1I3-222ENST00000506018 KCNQ4P56696 695 aa14.15□□□□□ -0.14
NR1I3-222ENST00000506018 AMOTQ4VCS5 1084 aa14.15□□□□□ -0.14
NR1I3-222ENST00000506018 FLAD1Q8NFF5 587 aa14.15□□□□□ -0.14
NR1I3-222ENST00000506018 ARXQ96QS3 562 aa14.15□□□□□ -0.14
NR1I3-222ENST00000506018 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
NR1I3-222ENST00000506018 PIGBQ92521 554 aa14.13□□□□□ -0.15
NR1I3-222ENST00000506018 FHDC1Q9C0D6 1143 aaPredicted RBP14.13□□□□□ -0.15
NR1I3-222ENST00000506018 COL24A1Q17RW2 1714 aa14.13□□□□□ -0.15
NR1I3-222ENST00000506018 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
NR1I3-222ENST00000506018 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
NR1I3-222ENST00000506018 AK7Q96M32 723 aa14.12□□□□□ -0.15
NR1I3-222ENST00000506018 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
NR1I3-222ENST00000506018 SYT17Q9BSW7 474 aa14.12□□□□□ -0.15
NR1I3-222ENST00000506018 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
NR1I3-222ENST00000506018 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
NR1I3-222ENST00000506018 MAP3K5Q99683 1374 aa14.11□□□□□ -0.15
NR1I3-222ENST00000506018 SULT6B1Q6IMI4 303 aa14.1□□□□□ -0.15
NR1I3-222ENST00000506018 ZNF530Q6P9A1 599 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms