RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
PRDM2-214ENST00000505823 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
PRDM2-214ENST00000505823 FBLN1P23142 703 aa16.38■□□□□ 0.21
PRDM2-214ENST00000505823 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
PRDM2-214ENST00000505823 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
PRDM2-214ENST00000505823 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
PRDM2-214ENST00000505823 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
PRDM2-214ENST00000505823 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
PRDM2-214ENST00000505823 TNNT2P45379 298 aaPredicted RBP16.35■□□□□ 0.21
PRDM2-214ENST00000505823 NBPF6Q5VWK0 638 aa16.35■□□□□ 0.21
PRDM2-214ENST00000505823 NBPF4Q96M43 638 aa16.35■□□□□ 0.21
PRDM2-214ENST00000505823 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
PRDM2-214ENST00000505823 MYOM1P52179 1685 aa16.34■□□□□ 0.21
PRDM2-214ENST00000505823 TNS1Q9HBL0 1735 aaKnown RBP16.34■□□□□ 0.21
PRDM2-214ENST00000505823 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
PRDM2-214ENST00000505823 EMILIN1Q9Y6C2 1016 aa16.34■□□□□ 0.21
PRDM2-214ENST00000505823 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
PRDM2-214ENST00000505823 ABCB7O75027 752 aa16.32■□□□□ 0.2
PRDM2-214ENST00000505823 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
PRDM2-214ENST00000505823 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
PRDM2-214ENST00000505823 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
PRDM2-214ENST00000505823 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
PRDM2-214ENST00000505823 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
PRDM2-214ENST00000505823 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
PRDM2-214ENST00000505823 KIF7Q2M1P5 1343 aa16.31■□□□□ 0.2
PRDM2-214ENST00000505823 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
PRDM2-214ENST00000505823 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
PRDM2-214ENST00000505823 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
PRDM2-214ENST00000505823 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
PRDM2-214ENST00000505823 KCNQ2O43526 872 aa16.29■□□□□ 0.2
PRDM2-214ENST00000505823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRDM2-214ENST00000505823 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
PRDM2-214ENST00000505823 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
PRDM2-214ENST00000505823 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
PRDM2-214ENST00000505823 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
PRDM2-214ENST00000505823 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
PRDM2-214ENST00000505823 SPON1Q9HCB6 807 aa16.26■□□□□ 0.19
PRDM2-214ENST00000505823 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
PRDM2-214ENST00000505823 PTF1AQ7RTS3 328 aa16.25■□□□□ 0.19
PRDM2-214ENST00000505823 EYA1Q99502 592 aa16.25■□□□□ 0.19
PRDM2-214ENST00000505823 PPP1R1BQ9UD71 204 aaPredicted RBP16.25■□□□□ 0.19
PRDM2-214ENST00000505823 MEGF6O75095 1541 aa16.24■□□□□ 0.19
PRDM2-214ENST00000505823 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
PRDM2-214ENST00000505823 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
PRDM2-214ENST00000505823 ANKRD26Q9UPS8 1709 aa16.23■□□□□ 0.19
PRDM2-214ENST00000505823 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
PRDM2-214ENST00000505823 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
PRDM2-214ENST00000505823 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
PRDM2-214ENST00000505823 PLEKHO1Q53GL0 409 aaPredicted RBP16.23■□□□□ 0.19
PRDM2-214ENST00000505823 IFNL2Q8IZJ0 200 aa16.23■□□□□ 0.19
PRDM2-214ENST00000505823 RREB1Q92766 1687 aa16.23■□□□□ 0.19
PRDM2-214ENST00000505823 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
PRDM2-214ENST00000505823 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
PRDM2-214ENST00000505823 PROM2Q8N271 834 aa16.22■□□□□ 0.19
PRDM2-214ENST00000505823 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
PRDM2-214ENST00000505823 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
PRDM2-214ENST00000505823 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
PRDM2-214ENST00000505823 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
PRDM2-214ENST00000505823 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
PRDM2-214ENST00000505823 RGPD2P0DJD1 1756 aa16.2■□□□□ 0.18
PRDM2-214ENST00000505823 SRCAPQ6ZRS2 3230 aa16.19■□□□□ 0.18
PRDM2-214ENST00000505823 LRP5O75197 1615 aa16.19■□□□□ 0.18
PRDM2-214ENST00000505823 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
PRDM2-214ENST00000505823 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
PRDM2-214ENST00000505823 CYP27B1O15528 508 aa16.18■□□□□ 0.18
PRDM2-214ENST00000505823 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
PRDM2-214ENST00000505823 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
PRDM2-214ENST00000505823 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
PRDM2-214ENST00000505823 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
PRDM2-214ENST00000505823 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
PRDM2-214ENST00000505823 MTHFSP49914 203 aa16.17■□□□□ 0.18
PRDM2-214ENST00000505823 CFAP53Q96M91 514 aa16.17■□□□□ 0.18
PRDM2-214ENST00000505823 TFCP2L1Q9NZI6 479 aa16.17■□□□□ 0.18
PRDM2-214ENST00000505823 NCAPD2Q15021 1401 aa16.17■□□□□ 0.18
PRDM2-214ENST00000505823 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
PRDM2-214ENST00000505823 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
PRDM2-214ENST00000505823 ANO8Q9HCE9 1232 aaPredicted RBP16.16■□□□□ 0.18
PRDM2-214ENST00000505823 BTAF1O14981 1849 aa16.15■□□□□ 0.18
PRDM2-214ENST00000505823 PHKG2P15735 406 aa16.15■□□□□ 0.18
PRDM2-214ENST00000505823 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
PRDM2-214ENST00000505823 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
PRDM2-214ENST00000505823 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
PRDM2-214ENST00000505823 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
PRDM2-214ENST00000505823 FLAD1Q8NFF5 587 aa16.14■□□□□ 0.17
PRDM2-214ENST00000505823 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
PRDM2-214ENST00000505823 POLD1P28340 1107 aa16.13■□□□□ 0.17
PRDM2-214ENST00000505823 IL13P35225 146 aa16.13■□□□□ 0.17
PRDM2-214ENST00000505823 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
PRDM2-214ENST00000505823 ZBTB7AO95365 584 aa16.12■□□□□ 0.17
PRDM2-214ENST00000505823 LRRC4BQ9NT99 713 aa16.12■□□□□ 0.17
PRDM2-214ENST00000505823 NUDCQ9Y266 331 aa16.12■□□□□ 0.17
PRDM2-214ENST00000505823 PALLDQ8WX93 1383 aa16.12■□□□□ 0.17
PRDM2-214ENST00000505823 DOT1LQ8TEK3 1739 aa16.11■□□□□ 0.17
PRDM2-214ENST00000505823 CABP4P57796 275 aa16.11■□□□□ 0.17
PRDM2-214ENST00000505823 PIGBQ92521 554 aa16.1■□□□□ 0.17
PRDM2-214ENST00000505823 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
PRDM2-214ENST00000505823 PKD1L3Q7Z443 1732 aa16.1■□□□□ 0.17
PRDM2-214ENST00000505823 AK7Q96M32 723 aa16.09■□□□□ 0.17
PRDM2-214ENST00000505823 SHANK3Q9BYB0 1731 aa16.08■□□□□ 0.17
PRDM2-214ENST00000505823 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms