RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ANKRD24Q8TF21 1146 aa13.21□□□□□ -0.29
DDX41-203ENST00000504781 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
DDX41-203ENST00000504781 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
DDX41-203ENST00000504781 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
DDX41-203ENST00000504781 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
DDX41-203ENST00000504781 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
DDX41-203ENST00000504781 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
DDX41-203ENST00000504781 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
DDX41-203ENST00000504781 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
DDX41-203ENST00000504781 ZBTB7CA1YPR0 619 aa13.19□□□□□ -0.3
DDX41-203ENST00000504781 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
DDX41-203ENST00000504781 GLI3P10071 1580 aa13.19□□□□□ -0.3
DDX41-203ENST00000504781 ABCC6O95255 1503 aa13.18□□□□□ -0.3
DDX41-203ENST00000504781 GNAI1P63096 354 aa13.18□□□□□ -0.3
DDX41-203ENST00000504781 SF3B2Q13435 895 aaKnown RBP13.18□□□□□ -0.3
DDX41-203ENST00000504781 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
DDX41-203ENST00000504781 AMOTQ4VCS5 1084 aa13.18□□□□□ -0.3
DDX41-203ENST00000504781 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
DDX41-203ENST00000504781 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.18□□□□□ -0.3
DDX41-203ENST00000504781 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
DDX41-203ENST00000504781 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
DDX41-203ENST00000504781 KRT27Q7Z3Y8 459 aa13.17□□□□□ -0.3
DDX41-203ENST00000504781 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
DDX41-203ENST00000504781 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 FKBP8Q14318 412 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 CHRNA2Q15822 529 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
DDX41-203ENST00000504781 ERBB3P21860 1342 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 COL18A1P39060 1754 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.15□□□□□ -0.3
DDX41-203ENST00000504781 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 STRN4Q9NRL3 753 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX41-203ENST00000504781 KIAA0232Q92628 1395 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
DDX41-203ENST00000504781 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
DDX41-203ENST00000504781 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
DDX41-203ENST00000504781 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
DDX41-203ENST00000504781 CRYBG1Q9Y4K1 1723 aa13.13□□□□□ -0.31
DDX41-203ENST00000504781 EVA1CP58658 441 aa13.13□□□□□ -0.31
DDX41-203ENST00000504781 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
DDX41-203ENST00000504781 DLG5Q8TDM6 1919 aa13.13□□□□□ -0.31
DDX41-203ENST00000504781 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
DDX41-203ENST00000504781 CHL1O00533 1208 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
DDX41-203ENST00000504781 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 USP35Q9P2H5 1018 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
DDX41-203ENST00000504781 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
DDX41-203ENST00000504781 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
DDX41-203ENST00000504781 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
DDX41-203ENST00000504781 SPATA31A5Q5VU36 1347 aa13.11□□□□□ -0.31
DDX41-203ENST00000504781 SPATA31A7Q8IWB4 1347 aa13.11□□□□□ -0.31
DDX41-203ENST00000504781 WDR17Q8IZU2 1322 aa13.11□□□□□ -0.31
DDX41-203ENST00000504781 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
DDX41-203ENST00000504781 EP400Q96L91 3159 aa13.1□□□□□ -0.31
DDX41-203ENST00000504781 TATP17735 454 aaPredicted RBP13.1□□□□□ -0.31
DDX41-203ENST00000504781 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
DDX41-203ENST00000504781 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
DDX41-203ENST00000504781 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
DDX41-203ENST00000504781 SPG7Q9UQ90 795 aa13.1□□□□□ -0.31
DDX41-203ENST00000504781 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
DDX41-203ENST00000504781 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
DDX41-203ENST00000504781 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
DDX41-203ENST00000504781 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
DDX41-203ENST00000504781 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
DDX41-203ENST00000504781 NRAPQ86VF7 1730 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 MCM10Q7L590 875 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
DDX41-203ENST00000504781 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
DDX41-203ENST00000504781 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
DDX41-203ENST00000504781 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
DDX41-203ENST00000504781 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
DDX41-203ENST00000504781 VAMP4O75379 141 aa13.07□□□□□ -0.32
DDX41-203ENST00000504781 BAG6P46379 1132 aa13.07□□□□□ -0.32
DDX41-203ENST00000504781 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
DDX41-203ENST00000504781 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
DDX41-203ENST00000504781 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
DDX41-203ENST00000504781 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
DDX41-203ENST00000504781 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
DDX41-203ENST00000504781 CRB1P82279 1406 aa13.06□□□□□ -0.32
DDX41-203ENST00000504781 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
DDX41-203ENST00000504781 MS4A1P11836 297 aa13.06□□□□□ -0.32
DDX41-203ENST00000504781 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
DDX41-203ENST00000504781 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
DDX41-203ENST00000504781 BCAR3O75815 825 aa13.05□□□□□ -0.32
DDX41-203ENST00000504781 HSP90AB1P08238 724 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms