RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 FLT4P35916 1363 aa31.43■■■□□ 2.62
CDC42SE2-207ENST00000504701 EIF4G2P78344 907 aaKnown RBP eCLIP31.43■■■□□ 2.62
CDC42SE2-207ENST00000504701 MAP2P11137 1827 aaKnown RBP31.42■■■□□ 2.62
CDC42SE2-207ENST00000504701 SMG6Q86US8 1419 aaKnown RBP31.41■■■□□ 2.62
CDC42SE2-207ENST00000504701 ZCRB1Q8TBF4 217 aaKnown RBP31.41■■■□□ 2.62
CDC42SE2-207ENST00000504701 PPM1GO15355 546 aaPredicted RBP31.38■■■□□ 2.61
CDC42SE2-207ENST00000504701 SPON1Q9HCB6 807 aa31.38■■■□□ 2.61
CDC42SE2-207ENST00000504701 LRRC4BQ9NT99 713 aa31.38■■■□□ 2.61
CDC42SE2-207ENST00000504701 NSD2O96028 1365 aa31.38■■■□□ 2.61
CDC42SE2-207ENST00000504701 ZBTB7AO95365 584 aa31.37■■■□□ 2.61
CDC42SE2-207ENST00000504701 PRIM1P49642 420 aaKnown RBP31.37■■■□□ 2.61
CDC42SE2-207ENST00000504701 SLC15A2Q16348 729 aa31.37■■■□□ 2.61
CDC42SE2-207ENST00000504701 SYTL4Q96C24 671 aaPredicted RBP31.37■■■□□ 2.61
CDC42SE2-207ENST00000504701 STK32BQ9NY57 414 aa31.37■■■□□ 2.61
CDC42SE2-207ENST00000504701 CGNL1Q0VF96 1302 aa31.36■■■□□ 2.61
CDC42SE2-207ENST00000504701 KIF24Q5T7B8 1368 aa31.35■■■□□ 2.61
CDC42SE2-207ENST00000504701 KCNQ4P56696 695 aa31.34■■■□□ 2.61
CDC42SE2-207ENST00000504701 ZNF827Q17R98 1081 aa31.34■■■□□ 2.61
CDC42SE2-207ENST00000504701 TNNT2P45379 298 aaPredicted RBP31.33■■■□□ 2.61
CDC42SE2-207ENST00000504701 RAPGEF4Q8WZA2 1011 aa31.33■■■□□ 2.61
CDC42SE2-207ENST00000504701 PANK3Q9H999 370 aa31.32■■■□□ 2.6
CDC42SE2-207ENST00000504701 TATP17735 454 aaPredicted RBP31.31■■■□□ 2.6
CDC42SE2-207ENST00000504701 POLKQ9UBT6 870 aa31.31■■■□□ 2.6
CDC42SE2-207ENST00000504701 ATF5Q9Y2D1 282 aaPredicted RBP31.31■■■□□ 2.6
CDC42SE2-207ENST00000504701 LY75O60449 1722 aa31.31■■■□□ 2.6
CDC42SE2-207ENST00000504701 PPP1R1BQ9UD71 204 aaPredicted RBP31.3■■■□□ 2.6
CDC42SE2-207ENST00000504701 TOGARAM1Q9Y4F4 1720 aa31.29■■■□□ 2.6
CDC42SE2-207ENST00000504701 PKD1L3Q7Z443 1732 aa31.29■■■□□ 2.6
CDC42SE2-207ENST00000504701 TUBGCP6Q96RT7 1819 aa31.28■■■□□ 2.6
CDC42SE2-207ENST00000504701 NCAPD2Q15021 1401 aa31.28■■■□□ 2.6
CDC42SE2-207ENST00000504701 WASHC2AQ641Q2 1341 aa31.26■■■□□ 2.6
CDC42SE2-207ENST00000504701 PTGER2P43116 358 aa31.26■■■□□ 2.59
CDC42SE2-207ENST00000504701 CYP27B1O15528 508 aa31.24■■■□□ 2.59
CDC42SE2-207ENST00000504701 EYA1Q99502 592 aa31.24■■■□□ 2.59
CDC42SE2-207ENST00000504701 PCDH11XQ9BZA7 1347 aa31.23■■■□□ 2.59
CDC42SE2-207ENST00000504701 PCDH11YQ9BZA8 1340 aa31.23■■■□□ 2.59
CDC42SE2-207ENST00000504701 AKT1S1Q96B36 256 aa31.22■■■□□ 2.59
CDC42SE2-207ENST00000504701 ITGB4P16144 1822 aa31.21■■■□□ 2.59
CDC42SE2-207ENST00000504701 QSER1Q2KHR3 1735 aa31.19■■■□□ 2.58
CDC42SE2-207ENST00000504701 EIF4A2Q14240 407 aaKnown RBP31.19■■■□□ 2.58
CDC42SE2-207ENST00000504701 SLC27A3Q5K4L6 730 aa31.19■■■□□ 2.58
CDC42SE2-207ENST00000504701 SGIP1Q9BQI5 828 aa31.18■■■□□ 2.58
CDC42SE2-207ENST00000504701 MTFR1LQ9H019 292 aa31.17■■■□□ 2.58
CDC42SE2-207ENST00000504701 CCNL1Q9UK58 526 aaPredicted RBP31.15■■■□□ 2.58
CDC42SE2-207ENST00000504701 KIF7Q2M1P5 1343 aa31.15■■■□□ 2.58
CDC42SE2-207ENST00000504701 PNPLA7Q6ZV29 1317 aa31.15■■■□□ 2.58
CDC42SE2-207ENST00000504701 MPRIPQ6WCQ1 1025 aa31.13■■■□□ 2.57
CDC42SE2-207ENST00000504701 C5P01031 1676 aa31.12■■■□□ 2.57
CDC42SE2-207ENST00000504701 TAF1LQ8IZX4 1826 aa31.1■■■□□ 2.57
CDC42SE2-207ENST00000504701 MORC1Q86VD1 984 aa31.09■■■□□ 2.57
CDC42SE2-207ENST00000504701 FHDC1Q9C0D6 1143 aaPredicted RBP31.09■■■□□ 2.57
CDC42SE2-207ENST00000504701 TFCP2L1Q9NZI6 479 aa31.09■■■□□ 2.57
CDC42SE2-207ENST00000504701 PALLDQ8WX93 1383 aa31.08■■■□□ 2.57
CDC42SE2-207ENST00000504701 SPG7Q9UQ90 795 aa31.08■■■□□ 2.57
CDC42SE2-207ENST00000504701 IGSF1Q8N6C5 1336 aa31.07■■■□□ 2.56
CDC42SE2-207ENST00000504701 NKX1-1Q15270 411 aaPredicted RBP31.06■■■□□ 2.56
CDC42SE2-207ENST00000504701 PIGBQ92521 554 aa31.06■■■□□ 2.56
CDC42SE2-207ENST00000504701 COL24A1Q17RW2 1714 aa31.06■■■□□ 2.56
CDC42SE2-207ENST00000504701 KNSTRNQ9Y448 316 aa31.05■■■□□ 2.56
CDC42SE2-207ENST00000504701 AMER1Q5JTC6 1135 aaPredicted RBP31.04■■■□□ 2.56
CDC42SE2-207ENST00000504701 PHKG2P15735 406 aa31.03■■■□□ 2.56
CDC42SE2-207ENST00000504701 SYT17Q9BSW7 474 aa31.03■■■□□ 2.56
CDC42SE2-207ENST00000504701 AEBP1Q8IUX7 1158 aa31.02■■■□□ 2.56
CDC42SE2-207ENST00000504701 ARXQ96QS3 562 aa31.02■■■□□ 2.56
CDC42SE2-207ENST00000504701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.553e-12■□□□□ 8.9
CDC42SE2-207ENST00000504701 COL23A1Q86Y22 540 aaPredicted RBP31■■■□□ 2.55
CDC42SE2-207ENST00000504701 C4BP0C0L5 1744 aa30.99■■■□□ 2.55
CDC42SE2-207ENST00000504701 IFNL2Q8IZJ0 200 aa30.99■■■□□ 2.55
CDC42SE2-207ENST00000504701 SMIM5Q71RC9 77 aa30.98■■■□□ 2.55
CDC42SE2-207ENST00000504701 AMIGO3Q86WK7 504 aa30.98■■■□□ 2.55
CDC42SE2-207ENST00000504701 SLC16A10Q8TF71 515 aa30.97■■■□□ 2.55
CDC42SE2-207ENST00000504701 MSH5O43196 834 aa30.96■■■□□ 2.55
CDC42SE2-207ENST00000504701 ASAP1Q9ULH1 1129 aa30.96■■■□□ 2.55
CDC42SE2-207ENST00000504701 TMOD3Q9NYL9 352 aa30.95■■■□□ 2.55
CDC42SE2-207ENST00000504701 PER1O15534 1290 aaPredicted RBP30.94■■■□□ 2.54
CDC42SE2-207ENST00000504701 MSL1Q68DK7 614 aa30.94■■■□□ 2.54
CDC42SE2-207ENST00000504701 UBR3Q6ZT12 1888 aa30.93■■■□□ 2.54
CDC42SE2-207ENST00000504701 KLHL34Q8N239 644 aa30.93■■■□□ 2.54
CDC42SE2-207ENST00000504701 SMARCC1Q92922 1105 aaPredicted RBP30.93■■■□□ 2.54
CDC42SE2-207ENST00000504701 UTRNP46939 3433 aa30.93■■■□□ 2.54
CDC42SE2-207ENST00000504701 KDM6AO15550 1401 aaPredicted RBP30.92■■■□□ 2.54
CDC42SE2-207ENST00000504701 YY1P25490 414 aa30.92■■■□□ 2.54
CDC42SE2-207ENST00000504701 IL13P35225 146 aa30.92■■■□□ 2.54
CDC42SE2-207ENST00000504701 CC2D1BQ5T0F9 858 aaKnown RBP30.92■■■□□ 2.54
CDC42SE2-207ENST00000504701 CNGB1Q14028 1251 aaPredicted RBP30.91■■■□□ 2.54
CDC42SE2-207ENST00000504701 SULT6B1Q6IMI4 303 aa30.9■■■□□ 2.54
CDC42SE2-207ENST00000504701 LINC00116Q8NCU8 138 aa30.9■■■□□ 2.54
CDC42SE2-207ENST00000504701 ATG3Q9NT62 314 aa30.9■■■□□ 2.54
CDC42SE2-207ENST00000504701 LOC102724428A0A0B4J2F2 783 aa30.89■■■□□ 2.54
CDC42SE2-207ENST00000504701 SIK1P57059 783 aa30.89■■■□□ 2.54
CDC42SE2-207ENST00000504701 ITPK1Q13572 414 aa30.89■■■□□ 2.54
CDC42SE2-207ENST00000504701 ZNF530Q6P9A1 599 aaPredicted RBP30.89■■■□□ 2.54
CDC42SE2-207ENST00000504701 MAP3K5Q99683 1374 aa30.89■■■□□ 2.54
CDC42SE2-207ENST00000504701 DCAF8L1A6NGE4 600 aa30.88■■■□□ 2.53
CDC42SE2-207ENST00000504701 POLD1P28340 1107 aa30.88■■■□□ 2.53
CDC42SE2-207ENST00000504701 MTHFSP49914 203 aa30.88■■■□□ 2.53
CDC42SE2-207ENST00000504701 PLEKHO1Q53GL0 409 aaPredicted RBP30.88■■■□□ 2.53
CDC42SE2-207ENST00000504701 PLEKHG2Q9H7P9 1386 aa30.87■■■□□ 2.53
CDC42SE2-207ENST00000504701 PHF14O94880 888 aa30.86■■■□□ 2.53
CDC42SE2-207ENST00000504701 KDRP35968 1356 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms