RNA–Protein interactions for RNA: ENST00000504579.5

CANX-208, Transcript of calnexin, human

TSL 4

Gene CANX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CANX-208	ENST00000504579	RAPGEF4	Q8WZA2	1011 aa		31.79	■■■□□ 2.68
CANX-208	ENST00000504579	SHANK3	Q9BYB0	1731 aa		31.78	■■■□□ 2.68
CANX-208	ENST00000504579	BTAF1	O14981	1849 aa		31.77	■■■□□ 2.68
CANX-208	ENST00000504579	ANKRD26	Q9UPS8	1709 aa		31.77	■■■□□ 2.68
CANX-208	ENST00000504579	WASHC2A	Q641Q2	1341 aa		31.76	■■■□□ 2.68
CANX-208	ENST00000504579	POLK	Q9UBT6	870 aa		31.76	■■■□□ 2.67
CANX-208	ENST00000504579	TAT	P17735	454 aa	Predicted RBP	31.74	■■■□□ 2.67
CANX-208	ENST00000504579	PRIM1	P49642	420 aa	Known RBP	31.74	■■■□□ 2.67
CANX-208	ENST00000504579	STK32B	Q9NY57	414 aa		31.74	■■■□□ 2.67
CANX-208	ENST00000504579	SLC15A2	Q16348	729 aa		31.73	■■■□□ 2.67
CANX-208	ENST00000504579	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.73	■■■□□ 2.67
CANX-208	ENST00000504579	SPON1	Q9HCB6	807 aa		31.73	■■■□□ 2.67
CANX-208	ENST00000504579	SYTL4	Q96C24	671 aa	Predicted RBP	31.72	■■■□□ 2.67
CANX-208	ENST00000504579	TNNT2	P45379	298 aa	Predicted RBP	31.71	■■■□□ 2.67
CANX-208	ENST00000504579	NCAPD2	Q15021	1401 aa		31.71	■■■□□ 2.67
CANX-208	ENST00000504579	CASZ1	Q86V15	1759 aa		31.71	■■■□□ 2.67
CANX-208	ENST00000504579	NSD2	O96028	1365 aa		31.7	■■■□□ 2.67
CANX-208	ENST00000504579	LRRC4B	Q9NT99	713 aa		31.69	■■■□□ 2.66
CANX-208	ENST00000504579	DOT1L	Q8TEK3	1739 aa		31.69	■■■□□ 2.66
CANX-208	ENST00000504579	MAP2	P11137	1827 aa	Known RBP	31.68	■■■□□ 2.66
CANX-208	ENST00000504579	PCDH11X	Q9BZA7	1347 aa		31.68	■■■□□ 2.66
CANX-208	ENST00000504579	PCDH11Y	Q9BZA8	1340 aa		31.68	■■■□□ 2.66
CANX-208	ENST00000504579	PAPPA	Q13219	1627 aa		31.67	■■■□□ 2.66
CANX-208	ENST00000504579	EYA1	Q99502	592 aa		31.66	■■■□□ 2.66
CANX-208	ENST00000504579	KAT6B	Q8WYB5	2073 aa		31.66	■■■□□ 2.66
CANX-208	ENST00000504579	KIF7	Q2M1P5	1343 aa		31.65	■■■□□ 2.66
CANX-208	ENST00000504579	SLC27A3	Q5K4L6	730 aa		31.64	■■■□□ 2.66
CANX-208	ENST00000504579	CYP27B1	O15528	508 aa		31.63	■■■□□ 2.65
CANX-208	ENST00000504579	ZBTB7A	O95365	584 aa		31.62	■■■□□ 2.65
CANX-208	ENST00000504579	EIF4A2	Q14240	407 aa	Known RBP	31.62	■■■□□ 2.65
CANX-208	ENST00000504579	ZNF827	Q17R98	1081 aa		31.62	■■■□□ 2.65
CANX-208	ENST00000504579	PPP1R1B	Q9UD71	204 aa	Predicted RBP	31.6	■■■□□ 2.65
CANX-208	ENST00000504579	KNSTRN	Q9Y448	316 aa		31.6	■■■□□ 2.65
CANX-208	ENST00000504579	PKD1L3	Q7Z443	1732 aa		31.59	■■■□□ 2.65
CANX-208	ENST00000504579	MORC1	Q86VD1	984 aa		31.59	■■■□□ 2.65
CANX-208	ENST00000504579	AKT1S1	Q96B36	256 aa		31.58	■■■□□ 2.65
CANX-208	ENST00000504579	KCNQ4	P56696	695 aa		31.57	■■■□□ 2.64
CANX-208	ENST00000504579	SPG7	Q9UQ90	795 aa		31.57	■■■□□ 2.64
CANX-208	ENST00000504579	PTGER2	P43116	358 aa		31.56	■■■□□ 2.64
CANX-208	ENST00000504579	ATF5	Q9Y2D1	282 aa	Predicted RBP	31.56	■■■□□ 2.64
CANX-208	ENST00000504579	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	31.55	■■■□□ 2.64	2e-10	■□□□□ 8.8
CANX-208	ENST00000504579	LY75	O60449	1722 aa		31.55	■■■□□ 2.64
CANX-208	ENST00000504579	NKX1-1	Q15270	411 aa	Predicted RBP	31.54	■■■□□ 2.64
CANX-208	ENST00000504579	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.54	■■■□□ 2.64
CANX-208	ENST00000504579	MTFR1L	Q9H019	292 aa		31.54	■■■□□ 2.64
CANX-208	ENST00000504579	IGSF1	Q8N6C5	1336 aa		31.52	■■■□□ 2.64
CANX-208	ENST00000504579	CCNL1	Q9UK58	526 aa	Predicted RBP	31.52	■■■□□ 2.64
CANX-208	ENST00000504579	MPRIP	Q6WCQ1	1025 aa		31.51	■■■□□ 2.63
CANX-208	ENST00000504579	TOGARAM1	Q9Y4F4	1720 aa		31.49	■■■□□ 2.63
CANX-208	ENST00000504579	SGIP1	Q9BQI5	828 aa		31.49	■■■□□ 2.63
CANX-208	ENST00000504579	PLEKHG2	Q9H7P9	1386 aa		31.48	■■■□□ 2.63
CANX-208	ENST00000504579	PER1	O15534	1290 aa	Predicted RBP	31.47	■■■□□ 2.63
CANX-208	ENST00000504579	PHKG2	P15735	406 aa		31.46	■■■□□ 2.63
CANX-208	ENST00000504579	IFNL2	Q8IZJ0	200 aa		31.46	■■■□□ 2.63
CANX-208	ENST00000504579	TFCP2L1	Q9NZI6	479 aa		31.46	■■■□□ 2.63
CANX-208	ENST00000504579	PNPLA7	Q6ZV29	1317 aa		31.46	■■■□□ 2.63
CANX-208	ENST00000504579	PALLD	Q8WX93	1383 aa		31.45	■■■□□ 2.63
CANX-208	ENST00000504579	PIGB	Q92521	554 aa		31.44	■■■□□ 2.62
CANX-208	ENST00000504579	QSER1	Q2KHR3	1735 aa		31.43	■■■□□ 2.62
CANX-208	ENST00000504579	SLC16A10	Q8TF71	515 aa		31.42	■■■□□ 2.62
CANX-208	ENST00000504579	ITGB4	P16144	1822 aa		31.41	■■■□□ 2.62
CANX-208	ENST00000504579	SMARCC1	Q92922	1105 aa	Predicted RBP	31.41	■■■□□ 2.62
CANX-208	ENST00000504579	AEBP1	Q8IUX7	1158 aa		31.39	■■■□□ 2.62
CANX-208	ENST00000504579	IL13	P35225	146 aa		31.38	■■■□□ 2.61
CANX-208	ENST00000504579	TMOD3	Q9NYL9	352 aa		31.38	■■■□□ 2.61
CANX-208	ENST00000504579	TUBGCP6	Q96RT7	1819 aa		31.38	■■■□□ 2.61
CANX-208	ENST00000504579	CC2D1B	Q5T0F9	858 aa	Known RBP	31.37	■■■□□ 2.61
CANX-208	ENST00000504579	ARX	Q96QS3	562 aa		31.37	■■■□□ 2.61
CANX-208	ENST00000504579	FHDC1	Q9C0D6	1143 aa	Predicted RBP	31.37	■■■□□ 2.61
CANX-208	ENST00000504579	PLEKHO1	Q53GL0	409 aa	Predicted RBP	31.36	■■■□□ 2.61
CANX-208	ENST00000504579	HMGB2	P26583	209 aa	Known RBP	31.35	■■■□□ 2.61
CANX-208	ENST00000504579	MTHFS	P49914	203 aa		31.35	■■■□□ 2.61
CANX-208	ENST00000504579	C5	P01031	1676 aa		31.35	■■■□□ 2.61
CANX-208	ENST00000504579	KDR	P35968	1356 aa		31.34	■■■□□ 2.61
CANX-208	ENST00000504579	AMOT	Q4VCS5	1084 aa		31.34	■■■□□ 2.61
CANX-208	ENST00000504579	SULT6B1	Q6IMI4	303 aa		31.34	■■■□□ 2.61
CANX-208	ENST00000504579	SYT17	Q9BSW7	474 aa		31.34	■■■□□ 2.61
CANX-208	ENST00000504579	COL23A1	Q86Y22	540 aa	Predicted RBP	31.33	■■■□□ 2.61
CANX-208	ENST00000504579	ASAP1	Q9ULH1	1129 aa		31.32	■■■□□ 2.6
CANX-208	ENST00000504579	NPC1L1	Q9UHC9	1359 aa		31.31	■■■□□ 2.6
CANX-208	ENST00000504579	HSP90AB1	P08238	724 aa	Known RBP	31.31	■■■□□ 2.6
CANX-208	ENST00000504579	ZNF530	Q6P9A1	599 aa	Predicted RBP	31.31	■■■□□ 2.6
CANX-208	ENST00000504579	DCAF5	Q96JK2	942 aa		31.31	■■■□□ 2.6
CANX-208	ENST00000504579	LOC102724428	A0A0B4J2F2	783 aa		31.3	■■■□□ 2.6
CANX-208	ENST00000504579	SIK1	P57059	783 aa		31.3	■■■□□ 2.6
CANX-208	ENST00000504579	ERVV-2	B6SEH9	535 aa		31.29	■■■□□ 2.6
CANX-208	ENST00000504579	ATG3	Q9NT62	314 aa		31.29	■■■□□ 2.6
CANX-208	ENST00000504579	COL24A1	Q17RW2	1714 aa		31.29	■■■□□ 2.6
CANX-208	ENST00000504579	TAF1L	Q8IZX4	1826 aa		31.28	■■■□□ 2.6
CANX-208	ENST00000504579	DCAF8L1	A6NGE4	600 aa		31.28	■■■□□ 2.6
CANX-208	ENST00000504579	POLD1	P28340	1107 aa		31.28	■■■□□ 2.6
CANX-208	ENST00000504579	MAP3K5	Q99683	1374 aa		31.28	■■■□□ 2.6
CANX-208	ENST00000504579	KDM6A	O15550	1401 aa	Predicted RBP	31.27	■■■□□ 2.6
CANX-208	ENST00000504579	MSH5	O43196	834 aa		31.27	■■■□□ 2.6
CANX-208	ENST00000504579	C4B	P0C0L5	1744 aa		31.26	■■■□□ 2.59
CANX-208	ENST00000504579	C1orf141	Q5JVX7	400 aa		31.24	■■■□□ 2.59
CANX-208	ENST00000504579	LINC00116	Q8NCU8	138 aa		31.24	■■■□□ 2.59
CANX-208	ENST00000504579	FLAD1	Q8NFF5	587 aa		31.24	■■■□□ 2.59
CANX-208	ENST00000504579	AK7	Q96M32	723 aa		31.24	■■■□□ 2.59
CANX-208	ENST00000504579	ITPK1	Q13572	414 aa		31.23	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms