RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 MBIPQ9NS73 344 aa23.76■■□□□ 1.39
PLXND1-204ENST00000504524 MCM10Q7L590 875 aa23.76■■□□□ 1.39
PLXND1-204ENST00000504524 CRBNQ96SW2 442 aa23.76■■□□□ 1.39
PLXND1-204ENST00000504524 LAS1LQ9Y4W2 734 aaKnown RBP23.76■■□□□ 1.39
PLXND1-204ENST00000504524 MAP3K5Q99683 1374 aa23.74■■□□□ 1.39
PLXND1-204ENST00000504524 HTATSF1O43719 755 aaKnown RBP23.73■■□□□ 1.39
PLXND1-204ENST00000504524 B4GALNT3Q6L9W6 998 aa23.73■■□□□ 1.39
PLXND1-204ENST00000504524 ADAMTS7Q9UKP4 1686 aa23.73■■□□□ 1.39
PLXND1-204ENST00000504524 PHLPP1O60346 1717 aa23.72■■□□□ 1.39
PLXND1-204ENST00000504524 PKD1L3Q7Z443 1732 aa23.72■■□□□ 1.39
PLXND1-204ENST00000504524 CHRNA2Q15822 529 aa23.72■■□□□ 1.39
PLXND1-204ENST00000504524 COL16A1Q07092 1604 aaPredicted RBP23.71■■□□□ 1.39
PLXND1-204ENST00000504524 CHL1O00533 1208 aa23.7■■□□□ 1.39
PLXND1-204ENST00000504524 GNAT3A8MTJ3 354 aa23.7■■□□□ 1.38
PLXND1-204ENST00000504524 BCL2L13Q9BXK5 485 aa23.7■■□□□ 1.38
PLXND1-204ENST00000504524 SIPA1L3O60292 1781 aaPredicted RBP23.7■■□□□ 1.38
PLXND1-204ENST00000504524 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.38
PLXND1-204ENST00000504524 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
PLXND1-204ENST00000504524 SSH1Q8WYL5 1049 aa23.68■■□□□ 1.38
PLXND1-204ENST00000504524 PDE3AQ14432 1141 aa23.67■■□□□ 1.38
PLXND1-204ENST00000504524 PARP4Q9UKK3 1724 aaKnown RBP23.67■■□□□ 1.38
PLXND1-204ENST00000504524 VAMP4O75379 141 aa23.67■■□□□ 1.38
PLXND1-204ENST00000504524 TSPYL6Q8N831 410 aa23.67■■□□□ 1.38
PLXND1-204ENST00000504524 COL5A2P05997 1499 aaPredicted RBP23.67■■□□□ 1.38
PLXND1-204ENST00000504524 SCN11AQ9UI33 1791 aa23.66■■□□□ 1.38
PLXND1-204ENST00000504524 MEGF6O75095 1541 aa23.66■■□□□ 1.38
PLXND1-204ENST00000504524 ZNF428Q96B54 188 aa23.66■■□□□ 1.38
PLXND1-204ENST00000504524 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
PLXND1-204ENST00000504524 ALDH1L2Q3SY69 923 aa23.65■■□□□ 1.38
PLXND1-204ENST00000504524 C8orf58Q8NAV2 365 aa23.65■■□□□ 1.38
PLXND1-204ENST00000504524 IL17REQ8NFR9 667 aa23.65■■□□□ 1.38
PLXND1-204ENST00000504524 SMC4Q9NTJ3 1288 aa23.65■■□□□ 1.38
PLXND1-204ENST00000504524 PLEKHG2Q9H7P9 1386 aa23.65■■□□□ 1.38
PLXND1-204ENST00000504524 PLEKHO1Q53GL0 409 aaPredicted RBP23.64■■□□□ 1.38
PLXND1-204ENST00000504524 PRDM11Q9NQV5 511 aa23.64■■□□□ 1.38
PLXND1-204ENST00000504524 COL14A1Q05707 1796 aaKnown RBP23.64■■□□□ 1.38
PLXND1-204ENST00000504524 AMOTQ4VCS5 1084 aa23.64■■□□□ 1.37
PLXND1-204ENST00000504524 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
PLXND1-204ENST00000504524 CCDC136Q96JN2 1154 aa23.64■■□□□ 1.37
PLXND1-204ENST00000504524 TNNQ9UQP3 1299 aa23.64■■□□□ 1.37
PLXND1-204ENST00000504524 NLRP2Q9NX02 1062 aa23.63■■□□□ 1.37
PLXND1-204ENST00000504524 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
PLXND1-204ENST00000504524 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
PLXND1-204ENST00000504524 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
PLXND1-204ENST00000504524 BRPF1P55201 1214 aaPredicted RBP23.62■■□□□ 1.37
PLXND1-204ENST00000504524 ZNF530Q6P9A1 599 aaPredicted RBP23.62■■□□□ 1.37
PLXND1-204ENST00000504524 AKAP4Q5JQC9 854 aa23.61■■□□□ 1.37
PLXND1-204ENST00000504524 PANK1Q8TE04 598 aa23.61■■□□□ 1.37
PLXND1-204ENST00000504524 SHANK3Q9BYB0 1731 aa23.61■■□□□ 1.37
PLXND1-204ENST00000504524 CSB-PGBD3P0DP91 1061 aa23.6■■□□□ 1.37
PLXND1-204ENST00000504524 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
PLXND1-204ENST00000504524 RLBP1P12271 317 aa23.59■■□□□ 1.37
PLXND1-204ENST00000504524 ZKSCAN2Q63HK3 967 aa23.59■■□□□ 1.37
PLXND1-204ENST00000504524 WDR17Q8IZU2 1322 aa23.59■■□□□ 1.37
PLXND1-204ENST00000504524 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
PLXND1-204ENST00000504524 KRT24Q2M2I5 525 aa23.59■■□□□ 1.37
PLXND1-204ENST00000504524 KIF16BQ96L93 1317 aa23.58■■□□□ 1.37
PLXND1-204ENST00000504524 MRPL50Q8N5N7 158 aaKnown RBP23.58■■□□□ 1.37
PLXND1-204ENST00000504524 MIS18AQ9NYP9 233 aa23.58■■□□□ 1.37
PLXND1-204ENST00000504524 TSPYL4Q9UJ04 414 aa23.58■■□□□ 1.37
PLXND1-204ENST00000504524 PLCH1Q4KWH8 1693 aa23.57■■□□□ 1.36
PLXND1-204ENST00000504524 ELL2O00472 640 aaPredicted RBP23.57■■□□□ 1.36
PLXND1-204ENST00000504524 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
PLXND1-204ENST00000504524 RAPGEF4Q8WZA2 1011 aa23.56■■□□□ 1.36
PLXND1-204ENST00000504524 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
PLXND1-204ENST00000504524 NOB1Q9ULX3 412 aaKnown RBP23.56■■□□□ 1.36
PLXND1-204ENST00000504524 COG6Q9Y2V7 657 aa23.56■■□□□ 1.36
PLXND1-204ENST00000504524 WNK3Q9BYP7 1800 aa23.55■■□□□ 1.36
PLXND1-204ENST00000504524 TRIM27P14373 513 aa23.55■■□□□ 1.36
PLXND1-204ENST00000504524 TATP17735 454 aaPredicted RBP23.55■■□□□ 1.36
PLXND1-204ENST00000504524 TAF7Q15545 349 aaPredicted RBP23.54■■□□□ 1.36
PLXND1-204ENST00000504524 ATF7IPQ6VMQ6 1270 aa23.54■■□□□ 1.36
PLXND1-204ENST00000504524 NRAPQ86VF7 1730 aa23.54■■□□□ 1.36
PLXND1-204ENST00000504524 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
PLXND1-204ENST00000504524 C1orf141Q5JVX7 400 aa23.53■■□□□ 1.36
PLXND1-204ENST00000504524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.53■■□□□ 1.36
PLXND1-204ENST00000504524 TOM1O60784 492 aa23.53■■□□□ 1.36
PLXND1-204ENST00000504524 DZIP1LQ8IYY4 767 aaKnown RBP23.53■■□□□ 1.36
PLXND1-204ENST00000504524 KDM6AO15550 1401 aaPredicted RBP23.52■■□□□ 1.36
PLXND1-204ENST00000504524 CLUAP1Q96AJ1 413 aa23.52■■□□□ 1.36
PLXND1-204ENST00000504524 MRC1P22897 1456 aa23.51■■□□□ 1.35
PLXND1-204ENST00000504524 MS4A1P11836 297 aa23.51■■□□□ 1.35
PLXND1-204ENST00000504524 MPRIPQ6WCQ1 1025 aa23.51■■□□□ 1.35
PLXND1-204ENST00000504524 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
PLXND1-204ENST00000504524 IPO8O15397 1037 aaKnown RBP23.5■■□□□ 1.35
PLXND1-204ENST00000504524 MVPQ14764 893 aaKnown RBP23.49■■□□□ 1.35
PLXND1-204ENST00000504524 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
PLXND1-204ENST00000504524 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
PLXND1-204ENST00000504524 SPG7Q9UQ90 795 aa23.49■■□□□ 1.35
PLXND1-204ENST00000504524 PHKG2P15735 406 aa23.48■■□□□ 1.35
PLXND1-204ENST00000504524 ARHGAP45Q92619 1136 aa23.48■■□□□ 1.35
PLXND1-204ENST00000504524 LARP1Q6PKG0 1096 aaKnown RBP23.47■■□□□ 1.35
PLXND1-204ENST00000504524 FTSJ3Q8IY81 847 aaKnown RBP23.47■■□□□ 1.35
PLXND1-204ENST00000504524 KDM2BQ8NHM5 1336 aa23.47■■□□□ 1.35
PLXND1-204ENST00000504524 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
PLXND1-204ENST00000504524 RGS12O14924 1447 aa23.46■■□□□ 1.35
PLXND1-204ENST00000504524 SOS1Q07889 1333 aaPredicted RBP23.46■■□□□ 1.35
PLXND1-204ENST00000504524 PIP4K2BP78356 416 aa23.46■■□□□ 1.35
PLXND1-204ENST00000504524 NWD2Q9ULI1 1742 aa23.46■■□□□ 1.35
PLXND1-204ENST00000504524 TEFQ10587 303 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms