RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 LRP6O75581 1613 aa8.18□□□□□ -1.1
COPB2-204ENST00000504295 XRCC6P12956 609 aaKnown RBP eCLIP8.18□□□□□ -1.1
COPB2-204ENST00000504295 INTS3Q68E01 1043 aaKnown RBP8.18□□□□□ -1.1
COPB2-204ENST00000504295 MSH6P52701 1360 aa8.18□□□□□ -1.1
COPB2-204ENST00000504295 VAMP4O75379 141 aa8.18□□□□□ -1.1
COPB2-204ENST00000504295 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
COPB2-204ENST00000504295 IDI1Q13907 227 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 SSH1Q8WYL5 1049 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 SNRKQ9NRH2 765 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 POGKQ9P215 609 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 RPAP1Q9BWH6 1393 aaPredicted RBP8.17□□□□□ -1.1
COPB2-204ENST00000504295 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
COPB2-204ENST00000504295 EPB41L2O43491 1005 aaKnown RBP8.17□□□□□ -1.1
COPB2-204ENST00000504295 TERF1P54274 439 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 ATF7IPQ6VMQ6 1270 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 POLKQ9UBT6 870 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 AKAP11Q9UKA4 1901 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 PRR36Q9H6K5 1346 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 GSPT1P15170 499 aaKnown RBP8.17□□□□□ -1.1
COPB2-204ENST00000504295 MTHFSP49914 203 aa8.17□□□□□ -1.1
COPB2-204ENST00000504295 FCHSD2O94868 740 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 CCDC146Q8IYE0 955 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 IFT57Q9NWB7 429 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 MYO5AQ9Y4I1 1855 aaKnown RBP8.16□□□□□ -1.1
COPB2-204ENST00000504295 ROBO2Q9HCK4 1378 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 ZNF646O15015 1829 aaPredicted RBP8.16□□□□□ -1.1
COPB2-204ENST00000504295 COL15A1P39059 1388 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 CHGAP10645 457 aaKnown RBP8.16□□□□□ -1.1
COPB2-204ENST00000504295 MCM4P33991 863 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 HSPA2P54652 639 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 KCNB2Q92953 911 aa8.16□□□□□ -1.1
COPB2-204ENST00000504295 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.1
COPB2-204ENST00000504295 TMEM2Q9UHN6 1383 aa8.15□□□□□ -1.1
COPB2-204ENST00000504295 ZNF445P59923 1031 aa8.15□□□□□ -1.1
COPB2-204ENST00000504295 HSP90AB1P08238 724 aaKnown RBP8.15□□□□□ -1.1
COPB2-204ENST00000504295 TXNDC2Q86VQ3 553 aa8.15□□□□□ -1.1
COPB2-204ENST00000504295 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
COPB2-204ENST00000504295 ZNF326Q5BKZ1 582 aaKnown RBP8.14□□□□□ -1.11
COPB2-204ENST00000504295 ZDHHC9Q9Y397 364 aa8.14□□□□□ -1.11
COPB2-204ENST00000504295 COL5A3P25940 1745 aaPredicted RBP8.14□□□□□ -1.11
COPB2-204ENST00000504295 NPHP4O75161 1426 aaPredicted RBP8.14□□□□□ -1.11
COPB2-204ENST00000504295 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
COPB2-204ENST00000504295 ITGB4P16144 1822 aa8.13□□□□□ -1.11
COPB2-204ENST00000504295 VGFO15240 615 aaPredicted RBP8.13□□□□□ -1.11
COPB2-204ENST00000504295 GAS2L3Q86XJ1 694 aa8.13□□□□□ -1.11
COPB2-204ENST00000504295 MYH16Q9H6N6 1097 aa8.13□□□□□ -1.11
COPB2-204ENST00000504295 PLEKHG3A1L390 1219 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 ZKSCAN2Q63HK3 967 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 TMEM87AQ8NBN3 555 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 DCTPP1Q9H773 170 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 DDX19BQ9UMR2 479 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 COG6Q9Y2V7 657 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 NCKAP5LQ9HCH0 1330 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 CUL4AQ13619 759 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 HS1BP3Q53T59 392 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
COPB2-204ENST00000504295 LAMB1P07942 1786 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 DDX60LQ5H9U9 1706 aaKnown RBP8.12□□□□□ -1.11
COPB2-204ENST00000504295 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
COPB2-204ENST00000504295 NBR1Q14596 966 aa8.11□□□□□ -1.11
COPB2-204ENST00000504295 AOX1Q06278 1338 aa8.11□□□□□ -1.11
COPB2-204ENST00000504295 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
COPB2-204ENST00000504295 CHL1O00533 1208 aa8.11□□□□□ -1.11
COPB2-204ENST00000504295 GCC1Q96CN9 775 aa8.11□□□□□ -1.11
COPB2-204ENST00000504295 NFE2L2Q16236 605 aa8.11□□□□□ -1.11
COPB2-204ENST00000504295 STRCQ7RTU9 1775 aa8.1□□□□□ -1.11
COPB2-204ENST00000504295 SCN7AQ01118 1682 aa8.1□□□□□ -1.11
COPB2-204ENST00000504295 SBF2Q86WG5 1849 aa8.1□□□□□ -1.11
COPB2-204ENST00000504295 PLEKHM2Q8IWE5 1019 aa8.1□□□□□ -1.11
COPB2-204ENST00000504295 LAS1LQ9Y4W2 734 aaKnown RBP8.1□□□□□ -1.11
COPB2-204ENST00000504295 TBX22Q9Y458 520 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 MYH13Q9UKX3 1938 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 NRAPQ86VF7 1730 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
COPB2-204ENST00000504295 PHACTR3Q96KR7 559 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 STAP2Q9UGK3 403 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 MAST2Q6P0Q8 1798 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 FOCADQ5VW36 1801 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 ATAD5Q96QE3 1844 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 CHD1LQ86WJ1 897 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 RWDD1Q9H446 243 aaPredicted RBP8.09□□□□□ -1.11
COPB2-204ENST00000504295 NHSQ6T4R5 1651 aa8.09□□□□□ -1.11
COPB2-204ENST00000504295 SLC4A3P48751 1232 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 ZNF500O60304 480 aaPredicted RBP8.08□□□□□ -1.12
COPB2-204ENST00000504295 CHMP5Q9NZZ3 219 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 NOB1Q9ULX3 412 aaKnown RBP8.08□□□□□ -1.12
COPB2-204ENST00000504295 COL24A1Q17RW2 1714 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 MYH2Q9UKX2 1941 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 FUCA2Q9BTY2 467 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 C22orf23Q9BZE7 217 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 BABAM1Q9NWV8 329 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 PXDNQ92626 1479 aa8.08□□□□□ -1.12
COPB2-204ENST00000504295 CDK5RAP2Q96SN8 1893 aa8.07□□□□□ -1.12
COPB2-204ENST00000504295 LTKP29376 864 aa8.07□□□□□ -1.12
COPB2-204ENST00000504295 ANKRD44Q8N8A2 993 aa8.07□□□□□ -1.12
COPB2-204ENST00000504295 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms