RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
TOPBP1-203ENST00000503464 E9PSI1 815 aa9.06□□□□□ -0.96
TOPBP1-203ENST00000503464 KCNA4P22459 653 aa9.06□□□□□ -0.96
TOPBP1-203ENST00000503464 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-203ENST00000503464 SIPA1L3O60292 1781 aaPredicted RBP9.06□□□□□ -0.96
TOPBP1-203ENST00000503464 MEGF6O75095 1541 aa9.05□□□□□ -0.96
TOPBP1-203ENST00000503464 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-203ENST00000503464 MTHFSDQ2M296 383 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-203ENST00000503464 CRB1P82279 1406 aa9.05□□□□□ -0.96
TOPBP1-203ENST00000503464 IL16Q14005 1332 aa9.05□□□□□ -0.96
TOPBP1-203ENST00000503464 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
TOPBP1-203ENST00000503464 TOM1O60784 492 aa9.04□□□□□ -0.96
TOPBP1-203ENST00000503464 PIP4K2BP78356 416 aa9.04□□□□□ -0.96
TOPBP1-203ENST00000503464 DCTN1Q14203 1278 aa9.04□□□□□ -0.96
TOPBP1-203ENST00000503464 CERKQ8TCT0 537 aa9.04□□□□□ -0.96
TOPBP1-203ENST00000503464 RCAN3Q9UKA8 241 aa9.04□□□□□ -0.96
TOPBP1-203ENST00000503464 SCN11AQ9UI33 1791 aa9.04□□□□□ -0.96
TOPBP1-203ENST00000503464 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
TOPBP1-203ENST00000503464 ZNF853P0CG23 659 aa9.03□□□□□ -0.96
TOPBP1-203ENST00000503464 TSR2Q969E8 191 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-203ENST00000503464 PRDM11Q9NQV5 511 aa9.03□□□□□ -0.96
TOPBP1-203ENST00000503464 KDM3BQ7LBC6 1761 aa9.03□□□□□ -0.96
TOPBP1-203ENST00000503464 NWD2Q9ULI1 1742 aa9.02□□□□□ -0.96
TOPBP1-203ENST00000503464 MAP3K5Q99683 1374 aa9.02□□□□□ -0.97
TOPBP1-203ENST00000503464 NEFMP07197 916 aa9.02□□□□□ -0.97
TOPBP1-203ENST00000503464 IRX6P78412 446 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-203ENST00000503464 MCM10Q7L590 875 aa9.02□□□□□ -0.97
TOPBP1-203ENST00000503464 WDR17Q8IZU2 1322 aa9.02□□□□□ -0.97
TOPBP1-203ENST00000503464 OVOS2A0A0G2JMS6 1433 aa9.01□□□□□ -0.97
TOPBP1-203ENST00000503464 LRP6O75581 1613 aa9.01□□□□□ -0.97
TOPBP1-203ENST00000503464 CEMIPQ8WUJ3 1361 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 TOGARAM1Q9Y4F4 1720 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 HAX1O00165 279 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 RRP1P56182 461 aaKnown RBP9□□□□□ -0.97
TOPBP1-203ENST00000503464 LMOD3Q0VAK6 560 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 FKBP8Q14318 412 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 GAS2L2Q8NHY3 880 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 MBIPQ9NS73 344 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 IFT57Q9NWB7 429 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
TOPBP1-203ENST00000503464 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 HAP1P54257 671 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 EXOSC9Q06265 439 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 IL17REQ8NFR9 667 aa8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 SLIT2O94813 1529 aa8.99□□□□□ -0.97
TOPBP1-203ENST00000503464 DISP2A7MBM2 1401 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 MRC1P22897 1456 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 GNAT3A8MTJ3 354 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 CHL1O00533 1208 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 HTATSF1O43719 755 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 PLIN1O60240 522 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 BCAR3O75815 825 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 CFAP44Q96MT7 982 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 GLI3P10071 1580 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 JCADQ9P266 1359 aa8.98□□□□□ -0.97
TOPBP1-203ENST00000503464 RARSP54136 660 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 GNAI1P63096 354 aa8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 ZNF530Q6P9A1 599 aaPredicted RBP8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 CARD10Q9BWT7 1032 aa8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 LGR6Q9HBX8 967 aa8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 BTG4Q9NY30 223 aa8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 LAS1LQ9Y4W2 734 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-203ENST00000503464 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 KRT24Q2M2I5 525 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 AMOTQ4VCS5 1084 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 PLEKHO1Q53GL0 409 aaPredicted RBP8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 AKAP4Q5JQC9 854 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 C20orf194Q5TEA3 1177 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 TOM1L2Q6ZVM7 507 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 TSPYL6Q8N831 410 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 C8orf58Q8NAV2 365 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 C5P01031 1676 aa8.96□□□□□ -0.98
TOPBP1-203ENST00000503464 CYP27B1O15528 508 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 ADAMTS2O95450 1211 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 NEFLP07196 543 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 PHKG2P15735 406 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 HSPA1LP34931 641 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 RAPGEF4Q8WZA2 1011 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 BCL2L13Q9BXK5 485 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 MIS18AQ9NYP9 233 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 ITGB4P16144 1822 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 BCL9LQ86UU0 1499 aa8.95□□□□□ -0.98
TOPBP1-203ENST00000503464 UBR2Q8IWV8 1755 aa8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 NUTM2BA6NNL0 878 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 NUTM2EB1AL46 878 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 VAMP4O75379 141 aa8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 CT47B1P0C2W7 299 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 NUTM2AQ8IVF1 878 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-203ENST00000503464 SSH1Q8WYL5 1049 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms