RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PLEKHO1Q53GL0 409 aaPredicted RBP26.92■■□□□ 1.9
CDC42SE2-206ENST00000503291 SALL2Q9Y467 1007 aaPredicted RBP26.92■■□□□ 1.9
CDC42SE2-206ENST00000503291 ATRNO75882 1429 aa26.91■■□□□ 1.9
CDC42SE2-206ENST00000503291 GJD4Q96KN9 370 aaPredicted RBP26.91■■□□□ 1.9
CDC42SE2-206ENST00000503291 NFE2L2Q16236 605 aa26.9■■□□□ 1.9
CDC42SE2-206ENST00000503291 AMOTQ4VCS5 1084 aa26.9■■□□□ 1.9
CDC42SE2-206ENST00000503291 ZNF772Q68DY9 489 aaPredicted RBP26.9■■□□□ 1.9
CDC42SE2-206ENST00000503291 BARGINQ6ZT62 677 aa26.9■■□□□ 1.9
CDC42SE2-206ENST00000503291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.89■■□□□ 1.92e-9■□□□□ 9.4
CDC42SE2-206ENST00000503291 OVOS2A0A0G2JMS6 1433 aa26.89■■□□□ 1.9
CDC42SE2-206ENST00000503291 RIPK4P57078 832 aa26.89■■□□□ 1.89
CDC42SE2-206ENST00000503291 GAS2L2Q8NHY3 880 aa26.89■■□□□ 1.89
CDC42SE2-206ENST00000503291 DISP2A7MBM2 1401 aa26.88■■□□□ 1.89
CDC42SE2-206ENST00000503291 PLEKHG2Q9H7P9 1386 aa26.87■■□□□ 1.89
CDC42SE2-206ENST00000503291 FAM98CQ17RN3 349 aaKnown RBP26.87■■□□□ 1.89
CDC42SE2-206ENST00000503291 SPG7Q9UQ90 795 aa26.87■■□□□ 1.89
CDC42SE2-206ENST00000503291 CDCA7Q9BWT1 371 aaPredicted RBP26.87■■□□□ 1.89
CDC42SE2-206ENST00000503291 PARP4Q9UKK3 1724 aaKnown RBP26.86■■□□□ 1.89
CDC42SE2-206ENST00000503291 ZCRB1Q8TBF4 217 aaKnown RBP26.86■■□□□ 1.89
CDC42SE2-206ENST00000503291 ZNF530Q6P9A1 599 aaPredicted RBP26.85■■□□□ 1.89
CDC42SE2-206ENST00000503291 NGEFQ8N5V2 710 aa26.84■■□□□ 1.89
CDC42SE2-206ENST00000503291 GLI3P10071 1580 aa26.84■■□□□ 1.89
CDC42SE2-206ENST00000503291 RGS17Q9UGC6 210 aaPredicted RBP26.83■■□□□ 1.89
CDC42SE2-206ENST00000503291 NCBP3Q53F19 620 aaKnown RBP26.83■■□□□ 1.89
CDC42SE2-206ENST00000503291 WNK3Q9BYP7 1800 aa26.82■■□□□ 1.88
CDC42SE2-206ENST00000503291 TRIM35Q9UPQ4 493 aa26.82■■□□□ 1.88
CDC42SE2-206ENST00000503291 EXOC5O00471 708 aa26.82■■□□□ 1.88
CDC42SE2-206ENST00000503291 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
CDC42SE2-206ENST00000503291 PKD1L3Q7Z443 1732 aa26.82■■□□□ 1.88
CDC42SE2-206ENST00000503291 CCDC27Q2M243 656 aa26.81■■□□□ 1.88
CDC42SE2-206ENST00000503291 DLG5Q8TDM6 1919 aa26.81■■□□□ 1.88
CDC42SE2-206ENST00000503291 GNAT3A8MTJ3 354 aa26.8■■□□□ 1.88
CDC42SE2-206ENST00000503291 CYP27B1O15528 508 aa26.8■■□□□ 1.88
CDC42SE2-206ENST00000503291 AKAP4Q5JQC9 854 aa26.8■■□□□ 1.88
CDC42SE2-206ENST00000503291 C1orf141Q5JVX7 400 aa26.8■■□□□ 1.88
CDC42SE2-206ENST00000503291 WWC1Q8IX03 1113 aa26.8■■□□□ 1.88
CDC42SE2-206ENST00000503291 ONECUT3O60422 494 aaPredicted RBP26.79■■□□□ 1.88
CDC42SE2-206ENST00000503291 DDB1Q16531 1140 aa26.79■■□□□ 1.88
CDC42SE2-206ENST00000503291 DDX54Q8TDD1 881 aaKnown RBP26.79■■□□□ 1.88
CDC42SE2-206ENST00000503291 ZBED9Q6R2W3 1325 aa26.79■■□□□ 1.88
CDC42SE2-206ENST00000503291 PCDH11XQ9BZA7 1347 aa26.79■■□□□ 1.88
CDC42SE2-206ENST00000503291 PCDH11YQ9BZA8 1340 aa26.79■■□□□ 1.88
CDC42SE2-206ENST00000503291 PHKG2P15735 406 aa26.78■■□□□ 1.88
CDC42SE2-206ENST00000503291 IFNL2Q8IZJ0 200 aa26.78■■□□□ 1.88
CDC42SE2-206ENST00000503291 MAP3K5Q99683 1374 aa26.78■■□□□ 1.88
CDC42SE2-206ENST00000503291 A0A0G2JS52 829 aa26.78■■□□□ 1.88
CDC42SE2-206ENST00000503291 MYT1Q01538 1121 aa26.78■■□□□ 1.88
CDC42SE2-206ENST00000503291 LMOD3Q0VAK6 560 aa26.78■■□□□ 1.88
CDC42SE2-206ENST00000503291 RBM6P78332 1123 aaKnown RBP26.77■■□□□ 1.88
CDC42SE2-206ENST00000503291 DCTN1Q14203 1278 aa26.77■■□□□ 1.88
CDC42SE2-206ENST00000503291 RTF1Q92541 710 aaKnown RBP26.77■■□□□ 1.88
CDC42SE2-206ENST00000503291 HTATSF1O43719 755 aaKnown RBP26.76■■□□□ 1.87
CDC42SE2-206ENST00000503291 ZNF521Q96K83 1311 aa26.76■■□□□ 1.87
CDC42SE2-206ENST00000503291 MCM10Q7L590 875 aa26.75■■□□□ 1.87
CDC42SE2-206ENST00000503291 TNS2Q63HR2 1409 aa26.75■■□□□ 1.87
CDC42SE2-206ENST00000503291 SHANK3Q9BYB0 1731 aa26.75■■□□□ 1.87
CDC42SE2-206ENST00000503291 MPRIPQ6WCQ1 1025 aa26.74■■□□□ 1.87
CDC42SE2-206ENST00000503291 THUMPD2Q9BTF0 503 aaKnown RBP26.74■■□□□ 1.87
CDC42SE2-206ENST00000503291 POTEAQ6S8J7 498 aa26.73■■□□□ 1.87
CDC42SE2-206ENST00000503291 IL17REQ8NFR9 667 aa26.73■■□□□ 1.87
CDC42SE2-206ENST00000503291 LRRC37A3O60309 1634 aa26.73■■□□□ 1.87
CDC42SE2-206ENST00000503291 THSD7AQ9UPZ6 1657 aa26.73■■□□□ 1.87
CDC42SE2-206ENST00000503291 SEPT12Q8IYM1 358 aa26.73■■□□□ 1.87
CDC42SE2-206ENST00000503291 RXRBP28702 533 aa26.72■■□□□ 1.87
CDC42SE2-206ENST00000503291 LGR6Q9HBX8 967 aa26.72■■□□□ 1.87
CDC42SE2-206ENST00000503291 HSP90AB1P08238 724 aaKnown RBP26.71■■□□□ 1.87
CDC42SE2-206ENST00000503291 NKX1-1Q15270 411 aaPredicted RBP26.7■■□□□ 1.87
CDC42SE2-206ENST00000503291 WDR63Q8IWG1 891 aa26.7■■□□□ 1.87
CDC42SE2-206ENST00000503291 DCAF5Q96JK2 942 aa26.7■■□□□ 1.86
CDC42SE2-206ENST00000503291 RNMTO43148 476 aaKnown RBP26.69■■□□□ 1.86
CDC42SE2-206ENST00000503291 PDE3BQ13370 1112 aa26.69■■□□□ 1.86
CDC42SE2-206ENST00000503291 MARCH10Q8NA82 808 aaPredicted RBP26.69■■□□□ 1.86
CDC42SE2-206ENST00000503291 GOLGA2Q08379 1002 aa26.68■■□□□ 1.86
CDC42SE2-206ENST00000503291 CEMIPQ8WUJ3 1361 aa26.67■■□□□ 1.86
CDC42SE2-206ENST00000503291 KDM6AO15550 1401 aaPredicted RBP26.66■■□□□ 1.86
CDC42SE2-206ENST00000503291 CALD1Q05682 793 aaKnown RBP26.66■■□□□ 1.86
CDC42SE2-206ENST00000503291 CDCA7LQ96GN5 454 aa26.66■■□□□ 1.86
CDC42SE2-206ENST00000503291 SPINK5Q9NQ38 1064 aaPredicted RBP26.65■■□□□ 1.86
CDC42SE2-206ENST00000503291 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
CDC42SE2-206ENST00000503291 IL16Q14005 1332 aa26.63■■□□□ 1.85
CDC42SE2-206ENST00000503291 VIRMAQ69YN4 1812 aaKnown RBP26.63■■□□□ 1.85
CDC42SE2-206ENST00000503291 SCN11AQ9UI33 1791 aa26.63■■□□□ 1.85
CDC42SE2-206ENST00000503291 TEFQ10587 303 aa26.62■■□□□ 1.85
CDC42SE2-206ENST00000503291 LAS1LQ9Y4W2 734 aaKnown RBP26.61■■□□□ 1.85
CDC42SE2-206ENST00000503291 SLFN5Q08AF3 891 aa26.61■■□□□ 1.85
CDC42SE2-206ENST00000503291 TAF7Q15545 349 aaPredicted RBP26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 ERVV-2B6SEH9 535 aa26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 E9PSI1 815 aa26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 NFATC2IPQ8NCF5 419 aa26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 CFAP44Q96MT7 982 aa26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 SLC52A2Q9HAB3 445 aa26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 IFT57Q9NWB7 429 aa26.6■■□□□ 1.85
CDC42SE2-206ENST00000503291 FAM182BQ5T319 152 aa26.59■■□□□ 1.85
CDC42SE2-206ENST00000503291 ZNF853P0CG23 659 aa26.58■■□□□ 1.85
CDC42SE2-206ENST00000503291 CABP4P57796 275 aa26.58■■□□□ 1.85
CDC42SE2-206ENST00000503291 GNAI1P63096 354 aa26.58■■□□□ 1.85
CDC42SE2-206ENST00000503291 KRT27Q7Z3Y8 459 aa26.58■■□□□ 1.85
CDC42SE2-206ENST00000503291 MIS18AQ9NYP9 233 aa26.58■■□□□ 1.85
CDC42SE2-206ENST00000503291 BRWD3Q6RI45 1802 aa26.57■■□□□ 1.84
CDC42SE2-206ENST00000503291 CHL1O00533 1208 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms